RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 Rhox8Q6VSS7 320 aa38.55■■■■□ 3.76
Nckap1-201ENSMUST00000028386 NischQ80TM9 1593 aa34.73■■■■□ 3.15
Nckap1-201ENSMUST00000028386 Ccdc136Q3TVA9 1136 aa34.67■■■■□ 3.14
Nckap1-201ENSMUST00000028386 Ehmt2Q9Z148 1263 aaKnown RBP34.48■■■■□ 3.11
Nckap1-201ENSMUST00000028386 Esf1Q3V1V3 845 aaKnown RBP33.93■■■■□ 3.02
Nckap1-201ENSMUST00000028386 Cngb1E1AZ71 1325 aa33.9■■■■□ 3.02
Nckap1-201ENSMUST00000028386 Gab3Q8BSM5 595 aa33.62■■■□□ 2.97
Nckap1-201ENSMUST00000028386 Trim41Q5NCC3 630 aa33.45■■■□□ 2.95
Nckap1-201ENSMUST00000028386 Rpgrip1Q9EPQ2 1331 aa33.37■■■□□ 2.93
Nckap1-201ENSMUST00000028386 Zeb1Q64318 1117 aa33.01■■■□□ 2.87
Nckap1-201ENSMUST00000028386 Npm2Q80W85 207 aa32.95■■■□□ 2.87
Nckap1-201ENSMUST00000028386 Myt1lP97500 1187 aa32.92■■■□□ 2.86
Nckap1-201ENSMUST00000028386 Abcc9P70170 1546 aa32.67■■■□□ 2.82
Nckap1-201ENSMUST00000028386 Wdr66E9Q743 1299 aa32.62■■■□□ 2.81
Nckap1-201ENSMUST00000028386 Ube2uB1AUC4 352 aa32.61■■■□□ 2.81
Nckap1-201ENSMUST00000028386 Las1lA2BE28 776 aaKnown RBP32.4■■■□□ 2.78
Nckap1-201ENSMUST00000028386 Gm35339A0A140LHH9 1649 aa32.27■■■□□ 2.76
Nckap1-201ENSMUST00000028386 Il27Q8K3I6 234 aa32.22■■■□□ 2.75
Nckap1-201ENSMUST00000028386 Zcchc6Q5BLK4 1491 aaKnown RBP32.18■■■□□ 2.74
Nckap1-201ENSMUST00000028386 UbtfP25976 765 aaKnown RBP32.14■■■□□ 2.74
Nckap1-201ENSMUST00000028386 HrcG5E8J6 738 aa31.95■■■□□ 2.71
Nckap1-201ENSMUST00000028386 Abcc8B2RUS7 1588 aa31.9■■■□□ 2.7
Nckap1-201ENSMUST00000028386 Acin1Q9JIX8 1338 aaKnown RBP31.87■■■□□ 2.69
Nckap1-201ENSMUST00000028386 Ccdc180J3QNE4 1664 aa31.73■■■□□ 2.67
Nckap1-201ENSMUST00000028386 Ap3b1Q9Z1T1 1105 aa31.48■■■□□ 2.63
Nckap1-201ENSMUST00000028386 NefmP08553 848 aa31.45■■■□□ 2.63
Nckap1-201ENSMUST00000028386 Rtl1Q7M732 1744 aa31.21■■■□□ 2.59
Nckap1-201ENSMUST00000028386 Fam50aQ9WV03 339 aaKnown RBP31.17■■■□□ 2.58
Nckap1-201ENSMUST00000028386 Slc24a1Q91WD8 1130 aa31.06■■■□□ 2.56
Nckap1-201ENSMUST00000028386 Ppargc1bQ8VHJ7 1014 aa31.04■■■□□ 2.56
Nckap1-201ENSMUST00000028386 Neurod1Q60867 357 aa30.85■■■□□ 2.53
Nckap1-201ENSMUST00000028386 Npm1Q61937 292 aaKnown RBP30.8■■■□□ 2.52
Nckap1-201ENSMUST00000028386 Pcgf6Q99NA9 353 aa30.78■■■□□ 2.52
Nckap1-201ENSMUST00000028386 Lmod2Q3UHZ5 550 aa30.72■■■□□ 2.51
Nckap1-201ENSMUST00000028386 Plekhg3Q4VAC9 1341 aa30.71■■■□□ 2.51
Nckap1-201ENSMUST00000028386 Chic1Q8CBW7 227 aa30.7■■■□□ 2.5
Nckap1-201ENSMUST00000028386 Mier1Q5UAK0 511 aa30.67■■■□□ 2.5
Nckap1-201ENSMUST00000028386 NclP09405 707 aaKnown RBP30.63■■■□□ 2.49
Nckap1-201ENSMUST00000028386 Supt5hO55201 1082 aaKnown RBP30.52■■■□□ 2.48
Nckap1-201ENSMUST00000028386 Rb1cc1Q9ESK9 1588 aa30.49■■■□□ 2.47
Nckap1-201ENSMUST00000028386 Cdk11bP24788 784 aaKnown RBP30.47■■■□□ 2.47
Nckap1-201ENSMUST00000028386 Brd4Q9ESU6 1400 aaKnown RBP30.44■■■□□ 2.46
Nckap1-201ENSMUST00000028386 Zbtb7cQ8VCZ7 619 aa30.41■■■□□ 2.46
Nckap1-201ENSMUST00000028386 Stra8P70278 393 aa30.39■■■□□ 2.46
Nckap1-201ENSMUST00000028386 TonslQ6NZL6 1363 aa30.37■■■□□ 2.45
Nckap1-201ENSMUST00000028386 Pelp1Q9DBD5 1123 aaKnown RBP30.36■■■□□ 2.45
Nckap1-201ENSMUST00000028386 Dcaf1Q80TR8 1506 aa30.33■■■□□ 2.45
Nckap1-201ENSMUST00000028386 Nop58Q6DFW4 536 aaKnown RBP30.3■■■□□ 2.44
Nckap1-201ENSMUST00000028386 Os9Q8K2C7 672 aa30.23■■■□□ 2.43
Nckap1-201ENSMUST00000028386 Ifnlr1Q8CGK5 535 aa30.22■■■□□ 2.43
Nckap1-201ENSMUST00000028386 CenpbP27790 599 aa30.2■■■□□ 2.43
Nckap1-201ENSMUST00000028386 Eid3Q3V124 375 aa30.18■■■□□ 2.42
Nckap1-201ENSMUST00000028386 Ubl4bQ9CQ84 188 aa30.14■■■□□ 2.42
Nckap1-201ENSMUST00000028386 NrdcQ8BHG1 1161 aa30.12■■■□□ 2.41
Nckap1-201ENSMUST00000028386 Cep164Q5DU05 1446 aa30.09■■■□□ 2.41
Nckap1-201ENSMUST00000028386 Fkbp15Q6P9Q6 1216 aaKnown RBP30.08■■■□□ 2.41
Nckap1-201ENSMUST00000028386 NacadQ5SWP3 1504 aa30.06■■■□□ 2.4
Nckap1-201ENSMUST00000028386 Hnrnpul2Q00PI9 745 aaKnown RBP30.04■■■□□ 2.4
Nckap1-201ENSMUST00000028386 Clip1Q922J3 1391 aa30.03■■■□□ 2.4
Nckap1-201ENSMUST00000028386 Eif5bQ05D44 1216 aaKnown RBP30.02■■■□□ 2.4
Nckap1-201ENSMUST00000028386 Mapk8ip2Q9ERE9 830 aa29.96■■■□□ 2.39
Nckap1-201ENSMUST00000028386 Anp32bQ9EST5 272 aaKnown RBP29.93■■■□□ 2.38
Nckap1-201ENSMUST00000028386 Zbtb4Q5F293 982 aa29.9■■■□□ 2.38
Nckap1-201ENSMUST00000028386 Baz1aO88379 1555 aa29.74■■■□□ 2.35
Nckap1-201ENSMUST00000028386 Erich6D3Z6S9 713 aa29.64■■■□□ 2.33
Nckap1-201ENSMUST00000028386 ClspnQ80YR7 1315 aa29.62■■■□□ 2.33
Nckap1-201ENSMUST00000028386 Kdm5dQ62240 1548 aa29.61■■■□□ 2.33
Nckap1-201ENSMUST00000028386 Sall2Q9QX96 1004 aa29.6■■■□□ 2.33
Nckap1-201ENSMUST00000028386 Chic2Q9D9G3 165 aa29.59■■■□□ 2.33
Nckap1-201ENSMUST00000028386 Tnnt3Q9QZ47 272 aa29.57■■■□□ 2.32
Nckap1-201ENSMUST00000028386 Prdm10Q3UTQ7 1184 aa29.5■■■□□ 2.31
Nckap1-201ENSMUST00000028386 Gm13697A2AK42 830 aa29.49■■■□□ 2.31
Nckap1-201ENSMUST00000028386 Golga3P55937 1487 aa29.49■■■□□ 2.31
Nckap1-201ENSMUST00000028386 Kif15Q6P9L6 1387 aa29.48■■■□□ 2.31
Nckap1-201ENSMUST00000028386 BlmO88700 1416 aa29.46■■■□□ 2.31
Nckap1-201ENSMUST00000028386 NeflP08551 543 aa29.45■■■□□ 2.3
Nckap1-201ENSMUST00000028386 Plppr3Q7TPB0 716 aa29.39■■■□□ 2.3
Nckap1-201ENSMUST00000028386 Setd5Q5XJV7 1441 aa29.37■■■□□ 2.29
Nckap1-201ENSMUST00000028386 Atp1b4Q99ME6 356 aa29.35■■■□□ 2.29
Nckap1-201ENSMUST00000028386 Rsf1E9PWW9 1441 aaKnown RBP29.34■■■□□ 2.29
Nckap1-201ENSMUST00000028386 Ttbk1Q6PCN3 1308 aa29.26■■■□□ 2.27
Nckap1-201ENSMUST00000028386 Amer1Q7TS75 1132 aa29.22■■■□□ 2.27
Nckap1-201ENSMUST00000028386 Ccer2J3QPU5 274 aa29.13■■■□□ 2.25
Nckap1-201ENSMUST00000028386 Gm38655A0A286YDK6 273 aa29.09■■■□□ 2.25
Nckap1-201ENSMUST00000028386 Gm13695A2AK44 830 aa29.02■■■□□ 2.24
Nckap1-201ENSMUST00000028386 Ercc6F8VPZ5 1481 aa29.01■■■□□ 2.23
Nckap1-201ENSMUST00000028386 Ccdc88bQ4QRL3 1481 aa29■■■□□ 2.23
Nckap1-201ENSMUST00000028386 Nlrp6Q91WS2 869 aa28.97■■■□□ 2.23
Nckap1-201ENSMUST00000028386 Aebp2Q9Z248 504 aaKnown RBP28.96■■■□□ 2.23
Nckap1-201ENSMUST00000028386 Arhgap27A2AB59 869 aa28.93■■■□□ 2.22
Nckap1-201ENSMUST00000028386 Ccdc18Q640L5 1455 aa28.93■■■□□ 2.22
Nckap1-201ENSMUST00000028386 Eea1Q8BL66 1411 aa28.9■■■□□ 2.22
Nckap1-201ENSMUST00000028386 Polr3glQ8R0C0 218 aa28.86■■■□□ 2.21
Nckap1-201ENSMUST00000028386 Rgl3Q3UYI5 709 aa28.84■■■□□ 2.21
Nckap1-201ENSMUST00000028386 4933416C03RikQ3V063 378 aa28.83■■■□□ 2.21
Nckap1-201ENSMUST00000028386 Csrnp3P59055 597 aa28.82■■■□□ 2.2
Nckap1-201ENSMUST00000028386 Mrs2Q5NCE8 434 aa28.81■■■□□ 2.2
Nckap1-201ENSMUST00000028386 Sycp2Q9CUU3 1500 aa28.77■■■□□ 2.2
Nckap1-201ENSMUST00000028386 Cecr2E9Q2Z1 1453 aa28.72■■■□□ 2.19
Nckap1-201ENSMUST00000028386 Clstn2Q9ER65 966 aa28.69■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms