RNA–Protein interactions for RNA: ENSMUST00000027833.11

Copa-201, Transcript of Coatomer subunit alpha, mousemouse

TSL 5 BASIC

Gene Copa, Length 4,351 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copa-201ENSMUST00000027833 Rhox8Q6VSS7 320 aa11.93□□□□□ -0.5
Copa-201ENSMUST00000027833 Gm35339A0A140LHH9 1649 aa11.86□□□□□ -0.51
Copa-201ENSMUST00000027833 NischQ80TM9 1593 aa11.43□□□□□ -0.58
Copa-201ENSMUST00000027833 Rpgrip1Q9EPQ2 1331 aa11.31□□□□□ -0.6
Copa-201ENSMUST00000027833 Abcc9P70170 1546 aa11.25□□□□□ -0.61
Copa-201ENSMUST00000027833 Abcc8B2RUS7 1588 aa11.1□□□□□ -0.63
Copa-201ENSMUST00000027833 Ehmt2Q9Z148 1263 aaKnown RBP11.02□□□□□ -0.65
Copa-201ENSMUST00000027833 ScribQ80U72 1612 aa10.8□□□□□ -0.68
Copa-201ENSMUST00000027833 Ccdc136Q3TVA9 1136 aa10.76□□□□□ -0.69
Copa-201ENSMUST00000027833 Acin1Q9JIX8 1338 aaKnown RBP10.71□□□□□ -0.7
Copa-201ENSMUST00000027833 Las1lA2BE28 776 aaKnown RBP10.59□□□□□ -0.71
Copa-201ENSMUST00000027833 Ccdc180J3QNE4 1664 aa10.57□□□□□ -0.72
Copa-201ENSMUST00000027833 Trim41Q5NCC3 630 aa10.57□□□□□ -0.72
Copa-201ENSMUST00000027833 Zeb1Q64318 1117 aa10.53□□□□□ -0.72
Copa-201ENSMUST00000027833 Rtl1Q7M732 1744 aa10.47□□□□□ -0.73
Copa-201ENSMUST00000027833 Gab3Q8BSM5 595 aa10.47□□□□□ -0.73
Copa-201ENSMUST00000027833 Cngb1E1AZ71 1325 aa10.46□□□□□ -0.73
Copa-201ENSMUST00000027833 HrcG5E8J6 738 aa10.45□□□□□ -0.74
Copa-201ENSMUST00000027833 Wdr66E9Q743 1299 aa10.44□□□□□ -0.74
Copa-201ENSMUST00000027833 Pcgf6Q99NA9 353 aa10.43□□□□□ -0.74
Copa-201ENSMUST00000027833 Esf1Q3V1V3 845 aaKnown RBP10.33□□□□□ -0.76
Copa-201ENSMUST00000027833 NefmP08553 848 aa10.31□□□□□ -0.76
Copa-201ENSMUST00000027833 Dcaf1Q80TR8 1506 aa10.29□□□□□ -0.76
Copa-201ENSMUST00000027833 Kdm5dQ62240 1548 aa10.24□□□□□ -0.77
Copa-201ENSMUST00000027833 Supt5hO55201 1082 aaKnown RBP10.21□□□□□ -0.78
Copa-201ENSMUST00000027833 Myt1lP97500 1187 aa10.16□□□□□ -0.78
Copa-201ENSMUST00000027833 UbtfP25976 765 aaKnown RBP10.15□□□□□ -0.78
Copa-201ENSMUST00000027833 CenpbP27790 599 aa10.15□□□□□ -0.78
Copa-201ENSMUST00000027833 Npm2Q80W85 207 aa10.13□□□□□ -0.79
Copa-201ENSMUST00000027833 Cdk11bP24788 784 aaKnown RBP10.06□□□□□ -0.8
Copa-201ENSMUST00000027833 Pelp1Q9DBD5 1123 aaKnown RBP10.02□□□□□ -0.81
Copa-201ENSMUST00000027833 BicraF8VPZ9 1578 aa10.01□□□□□ -0.81
Copa-201ENSMUST00000027833 Rb1cc1Q9ESK9 1588 aa10.01□□□□□ -0.81
Copa-201ENSMUST00000027833 Zcchc6Q5BLK4 1491 aaKnown RBP9.99□□□□□ -0.81
Copa-201ENSMUST00000027833 Ube2uB1AUC4 352 aa9.99□□□□□ -0.81
Copa-201ENSMUST00000027833 Nop58Q6DFW4 536 aaKnown RBP9.99□□□□□ -0.81
Copa-201ENSMUST00000027833 Mier1Q5UAK0 511 aa9.98□□□□□ -0.81
Copa-201ENSMUST00000027833 NacadQ5SWP3 1504 aa9.95□□□□□ -0.82
Copa-201ENSMUST00000027833 Neurod1Q60867 357 aa9.95□□□□□ -0.82
Copa-201ENSMUST00000027833 Ppargc1bQ8VHJ7 1014 aa9.93□□□□□ -0.82
Copa-201ENSMUST00000027833 Myt1Q8CFC2 1127 aa9.93□□□□□ -0.82
Copa-201ENSMUST00000027833 Sycp2Q9CUU3 1500 aa9.89□□□□□ -0.83
Copa-201ENSMUST00000027833 Stra8P70278 393 aa9.89□□□□□ -0.83
Copa-201ENSMUST00000027833 Baz1aO88379 1555 aa9.86□□□□□ -0.83
Copa-201ENSMUST00000027833 Sall2Q9QX96 1004 aa9.85□□□□□ -0.83
Copa-201ENSMUST00000027833 TonslQ6NZL6 1363 aa9.83□□□□□ -0.84
Copa-201ENSMUST00000027833 Cep164Q5DU05 1446 aa9.82□□□□□ -0.84
Copa-201ENSMUST00000027833 Tnnt3Q9QZ47 272 aa9.82□□□□□ -0.84
Copa-201ENSMUST00000027833 Slc24a1Q91WD8 1130 aa9.8□□□□□ -0.84
Copa-201ENSMUST00000027833 ClspnQ80YR7 1315 aa9.79□□□□□ -0.84
Copa-201ENSMUST00000027833 Anks4bQ8K3X6 423 aa9.79□□□□□ -0.84
Copa-201ENSMUST00000027833 Smarca2Q6DIC0 1577 aa9.77□□□□□ -0.85
Copa-201ENSMUST00000027833 Chic1Q8CBW7 227 aa9.76□□□□□ -0.85
Copa-201ENSMUST00000027833 Csrnp3P59055 597 aa9.75□□□□□ -0.85
Copa-201ENSMUST00000027833 Il27Q8K3I6 234 aa9.73□□□□□ -0.85
Copa-201ENSMUST00000027833 Ap3b1Q9Z1T1 1105 aa9.72□□□□□ -0.85
Copa-201ENSMUST00000027833 NclP09405 707 aaKnown RBP9.72□□□□□ -0.85
Copa-201ENSMUST00000027833 Fam50aQ9WV03 339 aaKnown RBP9.7□□□□□ -0.86
Copa-201ENSMUST00000027833 Crybg2B7ZCC2 1516 aa9.7□□□□□ -0.86
Copa-201ENSMUST00000027833 Plekhg3Q4VAC9 1341 aa9.66□□□□□ -0.86
Copa-201ENSMUST00000027833 Aplp2Q06335 707 aa9.66□□□□□ -0.86
Copa-201ENSMUST00000027833 Gm38655A0A286YDK6 273 aa9.65□□□□□ -0.86
Copa-201ENSMUST00000027833 Brd4Q9ESU6 1400 aaKnown RBP9.62□□□□□ -0.87
Copa-201ENSMUST00000027833 1700123L14RikQ3V2K7 440 aa9.61□□□□□ -0.87
Copa-201ENSMUST00000027833 Cecr2E9Q2Z1 1453 aa9.61□□□□□ -0.87
Copa-201ENSMUST00000027833 Amer1Q7TS75 1132 aa9.6□□□□□ -0.87
Copa-201ENSMUST00000027833 NrdcQ8BHG1 1161 aa9.6□□□□□ -0.87
Copa-201ENSMUST00000027833 Eif5bQ05D44 1216 aaKnown RBP9.59□□□□□ -0.87
Copa-201ENSMUST00000027833 Eid3Q3V124 375 aa9.57□□□□□ -0.88
Copa-201ENSMUST00000027833 Ttbk1Q6PCN3 1308 aa9.57□□□□□ -0.88
Copa-201ENSMUST00000027833 Aebp2Q9Z248 504 aaKnown RBP9.56□□□□□ -0.88
Copa-201ENSMUST00000027833 Rtl5Q5DTT4 599 aa9.55□□□□□ -0.88
Copa-201ENSMUST00000027833 Anp32aO35381 247 aa9.55□□□□□ -0.88
Copa-201ENSMUST00000027833 Mapk8ip2Q9ERE9 830 aa9.55□□□□□ -0.88
Copa-201ENSMUST00000027833 Clip1Q922J3 1391 aa9.54□□□□□ -0.88
Copa-201ENSMUST00000027833 DiexfQ8BTT6 772 aaKnown RBP9.54□□□□□ -0.88
Copa-201ENSMUST00000027833 Unc13aQ4KUS2 1712 aa9.53□□□□□ -0.88
Copa-201ENSMUST00000027833 Lmod2Q3UHZ5 550 aa9.49□□□□□ -0.89
Copa-201ENSMUST00000027833 Rsf1E9PWW9 1441 aaKnown RBP9.47□□□□□ -0.89
Copa-201ENSMUST00000027833 4933416C03RikQ3V063 378 aa9.45□□□□□ -0.9
Copa-201ENSMUST00000027833 Anp32bQ9EST5 272 aaKnown RBP9.44□□□□□ -0.9
Copa-201ENSMUST00000027833 Synj1Q8CHC4 1574 aa9.44□□□□□ -0.9
Copa-201ENSMUST00000027833 Golga3P55937 1487 aa9.43□□□□□ -0.9
Copa-201ENSMUST00000027833 NeflP08551 543 aa9.42□□□□□ -0.9
Copa-201ENSMUST00000027833 Calr4Q3TQS0 420 aa9.39□□□□□ -0.91
Copa-201ENSMUST00000027833 Fam71e1A1L3C1 212 aa9.35□□□□□ -0.91
Copa-201ENSMUST00000027833 Ccer2J3QPU5 274 aa9.35□□□□□ -0.91
Copa-201ENSMUST00000027833 Top2bQ64511 1612 aa9.34□□□□□ -0.91
Copa-201ENSMUST00000027833 Smarca4Q3TKT4 1613 aaKnown RBP9.33□□□□□ -0.92
Copa-201ENSMUST00000027833 Ccdc88bQ4QRL3 1481 aa9.32□□□□□ -0.92
Copa-201ENSMUST00000027833 Ppp4r2Q0VGB7 417 aa9.32□□□□□ -0.92
Copa-201ENSMUST00000027833 Npm1Q61937 292 aaKnown RBP9.32□□□□□ -0.92
Copa-201ENSMUST00000027833 Thoc2B1AZI6 1594 aaKnown RBP9.31□□□□□ -0.92
Copa-201ENSMUST00000027833 BlmO88700 1416 aa9.29□□□□□ -0.92
Copa-201ENSMUST00000027833 Hnrnpul2Q00PI9 745 aaKnown RBP9.29□□□□□ -0.92
Copa-201ENSMUST00000027833 Cttnbp2B9EJA2 1648 aa9.28□□□□□ -0.92
Copa-201ENSMUST00000027833 Wdr43Q6ZQL4 677 aaKnown RBP9.28□□□□□ -0.92
Copa-201ENSMUST00000027833 Setd5Q5XJV7 1441 aa9.27□□□□□ -0.92
Copa-201ENSMUST00000027833 SafbD3YXK2 937 aaKnown RBP9.27□□□□□ -0.92
Copa-201ENSMUST00000027833 Iqgap2Q3UQ44 1575 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 128.6 ms