RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 NischQ80TM9 1593 aa35,45■■■■□ 3,27
Tram1-201ENSMUST00000027068 Abcc9P70170 1546 aa34,33■■■■□ 3,09
Tram1-201ENSMUST00000027068 Gm35339A0A140LHH9 1649 aa34,17■■■■□ 3,06
Tram1-201ENSMUST00000027068 Rhox8Q6VSS7 320 aa34,03■■■■□ 3,04
Tram1-201ENSMUST00000027068 Abcc8B2RUS7 1588 aa33,43■■■□□ 2,94
Tram1-201ENSMUST00000027068 Rtl1Q7M732 1744 aa33,21■■■□□ 2,91
Tram1-201ENSMUST00000027068 Ccdc180J3QNE4 1664 aa32,92■■■□□ 2,86
Tram1-201ENSMUST00000027068 Rpgrip1Q9EPQ2 1331 aa32,38■■■□□ 2,77
Tram1-201ENSMUST00000027068 Zcchc6Q5BLK4 1491 aaKnown RBP32,14■■■□□ 2,74
Tram1-201ENSMUST00000027068 Ehmt2Q9Z148 1263 aaKnown RBP32■■■□□ 2,71
Tram1-201ENSMUST00000027068 Acin1Q9JIX8 1338 aaKnown RBP31,89■■■□□ 2,7
Tram1-201ENSMUST00000027068 Ccdc136Q3TVA9 1136 aa31,54■■■□□ 2,64
Tram1-201ENSMUST00000027068 HrcG5E8J6 738 aa31,45■■■□□ 2,63
Tram1-201ENSMUST00000027068 Dcaf1Q80TR8 1506 aa31,23■■■□□ 2,59
Tram1-201ENSMUST00000027068 Rb1cc1Q9ESK9 1588 aa31,12■■■□□ 2,57
Tram1-201ENSMUST00000027068 Pcgf6Q99NA9 353 aa31,08■■■□□ 2,57
Tram1-201ENSMUST00000027068 Trim41Q5NCC3 630 aa30,97■■■□□ 2,55
Tram1-201ENSMUST00000027068 ScribQ80U72 1612 aa30,89■■■□□ 2,54
Tram1-201ENSMUST00000027068 Baz1aO88379 1555 aa30,67■■■□□ 2,5
Tram1-201ENSMUST00000027068 Supt5hO55201 1082 aaKnown RBP30,5■■■□□ 2,47
Tram1-201ENSMUST00000027068 Kdm5dQ62240 1548 aa30,5■■■□□ 2,47
Tram1-201ENSMUST00000027068 Cep164Q5DU05 1446 aa30,32■■■□□ 2,44
Tram1-201ENSMUST00000027068 Gab3Q8BSM5 595 aa30,15■■■□□ 2,42
Tram1-201ENSMUST00000027068 Cngb1E1AZ71 1325 aa30,06■■■□□ 2,4
Tram1-201ENSMUST00000027068 NacadQ5SWP3 1504 aa30,06■■■□□ 2,4
Tram1-201ENSMUST00000027068 Chic1Q8CBW7 227 aa30,05■■■□□ 2,4
Tram1-201ENSMUST00000027068 Smarca2Q6DIC0 1577 aa30,03■■■□□ 2,4
Tram1-201ENSMUST00000027068 Zeb1Q64318 1117 aa30,02■■■□□ 2,4
Tram1-201ENSMUST00000027068 Neurod1Q60867 357 aa29,92■■■□□ 2,38
Tram1-201ENSMUST00000027068 Rsf1E9PWW9 1441 aaKnown RBP29,89■■■□□ 2,38
Tram1-201ENSMUST00000027068 Crybg2B7ZCC2 1516 aa29,75■■■□□ 2,35
Tram1-201ENSMUST00000027068 Mier1Q5UAK0 511 aa29,75■■■□□ 2,35
Tram1-201ENSMUST00000027068 Ccdc88bQ4QRL3 1481 aa29,62■■■□□ 2,33
Tram1-201ENSMUST00000027068 NefmP08553 848 aa29,61■■■□□ 2,33
Tram1-201ENSMUST00000027068 Sall2Q9QX96 1004 aa29,55■■■□□ 2,32
Tram1-201ENSMUST00000027068 Brd4Q9ESU6 1400 aaKnown RBP29,43■■■□□ 2,3
Tram1-201ENSMUST00000027068 Cecr2E9Q2Z1 1453 aa29,42■■■□□ 2,3
Tram1-201ENSMUST00000027068 Sycp2Q9CUU3 1500 aa29,41■■■□□ 2,3
Tram1-201ENSMUST00000027068 Golga3P55937 1487 aa29,38■■■□□ 2,29
Tram1-201ENSMUST00000027068 Esf1Q3V1V3 845 aaKnown RBP29,27■■■□□ 2,28
Tram1-201ENSMUST00000027068 Las1lA2BE28 776 aaKnown RBP29,23■■■□□ 2,27
Tram1-201ENSMUST00000027068 UbtfP25976 765 aaKnown RBP29,22■■■□□ 2,27
Tram1-201ENSMUST00000027068 Synj1Q8CHC4 1574 aa29,21■■■□□ 2,27
Tram1-201ENSMUST00000027068 Wdr66E9Q743 1299 aa29,13■■■□□ 2,25
Tram1-201ENSMUST00000027068 1700123L14RikQ3V2K7 440 aa29,07■■■□□ 2,24
Tram1-201ENSMUST00000027068 Aebp2Q9Z248 504 aaKnown RBP29,07■■■□□ 2,24
Tram1-201ENSMUST00000027068 Ppargc1bQ8VHJ7 1014 aa29■■■□□ 2,23
Tram1-201ENSMUST00000027068 Csrnp3P59055 597 aa28,98■■■□□ 2,23
Tram1-201ENSMUST00000027068 Anks4bQ8K3X6 423 aa28,98■■■□□ 2,23
Tram1-201ENSMUST00000027068 CftrP26361 1476 aa28,91■■■□□ 2,22
Tram1-201ENSMUST00000027068 CenpbP27790 599 aa28,89■■■□□ 2,22
Tram1-201ENSMUST00000027068 Myt1lP97500 1187 aa28,86■■■□□ 2,21
Tram1-201ENSMUST00000027068 Top2bQ64511 1612 aa28,81■■■□□ 2,2
Tram1-201ENSMUST00000027068 DiexfQ8BTT6 772 aaKnown RBP28,78■■■□□ 2,2
Tram1-201ENSMUST00000027068 BicraF8VPZ9 1578 aa28,75■■■□□ 2,19
Tram1-201ENSMUST00000027068 Cdk11bP24788 784 aaKnown RBP28,72■■■□□ 2,19
Tram1-201ENSMUST00000027068 Cc2d2aQ8CFW7 1633 aa28,72■■■□□ 2,19
Tram1-201ENSMUST00000027068 Nop58Q6DFW4 536 aaKnown RBP28,71■■■□□ 2,19
Tram1-201ENSMUST00000027068 ClspnQ80YR7 1315 aa28,69■■■□□ 2,18
Tram1-201ENSMUST00000027068 Rapgef2Q8CHG7 1496 aa28,68■■■□□ 2,18
Tram1-201ENSMUST00000027068 Cttnbp2B9EJA2 1648 aa28,58■■■□□ 2,16
Tram1-201ENSMUST00000027068 Myt1Q8CFC2 1127 aa28,56■■■□□ 2,16
Tram1-201ENSMUST00000027068 TonslQ6NZL6 1363 aa28,54■■■□□ 2,16
Tram1-201ENSMUST00000027068 Cep162Q6ZQ06 1403 aa28,53■■■□□ 2,16
Tram1-201ENSMUST00000027068 Plekhg3Q4VAC9 1341 aa28,52■■■□□ 2,16
Tram1-201ENSMUST00000027068 Npm2Q80W85 207 aa28,52■■■□□ 2,16
Tram1-201ENSMUST00000027068 Gm38655A0A286YDK6 273 aa28,43■■■□□ 2,14
Tram1-201ENSMUST00000027068 Fmn1Q05860 1466 aa28,41■■■□□ 2,14
Tram1-201ENSMUST00000027068 Top2aQ01320 1528 aaKnown RBP28,4■■■□□ 2,14
Tram1-201ENSMUST00000027068 Clip1Q922J3 1391 aa28,35■■■□□ 2,13
Tram1-201ENSMUST00000027068 Bcl11aQ9QYE3 773 aa28,32■■■□□ 2,12
Tram1-201ENSMUST00000027068 Aplp2Q06335 707 aa28,31■■■□□ 2,12
Tram1-201ENSMUST00000027068 Smarca4Q3TKT4 1613 aaKnown RBP28,28■■■□□ 2,12
Tram1-201ENSMUST00000027068 Eid3Q3V124 375 aa28,15■■■□□ 2,1
Tram1-201ENSMUST00000027068 Ncapd3Q6ZQK0 1506 aa28,15■■■□□ 2,1
Tram1-201ENSMUST00000027068 Ap3b1Q9Z1T1 1105 aa28,11■■■□□ 2,09
Tram1-201ENSMUST00000027068 Eif4g1Q6NZJ6 1600 aaKnown RBP27,96■■■□□ 2,07
Tram1-201ENSMUST00000027068 Mapk8ip2Q9ERE9 830 aa27,91■■■□□ 2,06
Tram1-201ENSMUST00000027068 Iqgap2Q3UQ44 1575 aa27,89■■■□□ 2,05
Tram1-201ENSMUST00000027068 Hnrnpul2Q00PI9 745 aaKnown RBP27,87■■■□□ 2,05
Tram1-201ENSMUST00000027068 Il27Q8K3I6 234 aa27,86■■■□□ 2,05
Tram1-201ENSMUST00000027068 Arhgap35Q91YM2 1499 aa27,85■■■□□ 2,05
Tram1-201ENSMUST00000027068 PrkcshO08795 521 aa27,84■■■□□ 2,05
Tram1-201ENSMUST00000027068 Arap1Q4LDD4 1452 aa27,83■■■□□ 2,05
Tram1-201ENSMUST00000027068 SafbD3YXK2 937 aaKnown RBP27,83■■■□□ 2,05
Tram1-201ENSMUST00000027068 PtprkP35822 1457 aa27,81■■■□□ 2,04
Tram1-201ENSMUST00000027068 Eea1Q8BL66 1411 aa27,79■■■□□ 2,04
Tram1-201ENSMUST00000027068 Setd5Q5XJV7 1441 aa27,74■■■□□ 2,03
Tram1-201ENSMUST00000027068 Kdm5bQ80Y84 1544 aa27,7■■■□□ 2,03
Tram1-201ENSMUST00000027068 Arhgef5E9Q7D5 1581 aa27,63■■■□□ 2,01
Tram1-201ENSMUST00000027068 Fam71e1A1L3C1 212 aa27,61■■■□□ 2,01
Tram1-201ENSMUST00000027068 TnnQ80Z71 1560 aa27,61■■■□□ 2,01
Tram1-201ENSMUST00000027068 Fam50aQ9WV03 339 aaKnown RBP27,59■■■□□ 2,01
Tram1-201ENSMUST00000027068 Ccdc18Q640L5 1455 aa27,59■■■□□ 2,01
Tram1-201ENSMUST00000027068 Tnnt3Q9QZ47 272 aa27,58■■■□□ 2,01
Tram1-201ENSMUST00000027068 NrkQ9R0G8 1455 aa27,58■■■□□ 2,01
Tram1-201ENSMUST00000027068 Ifnlr1Q8CGK5 535 aa27,57■■■□□ 2
Tram1-201ENSMUST00000027068 NclP09405 707 aaKnown RBP27,55■■■□□ 2
Tram1-201ENSMUST00000027068 Baz1bQ9Z277 1479 aa27,54■■■□□ 2
Tram1-201ENSMUST00000027068 BlmO88700 1416 aa27,54■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 9 ms