RNA–Protein interactions for RNA: ENSMUST00000026269.3

Limd1-201, Transcript of LIM domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Limd1, Length 4,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1-201ENSMUST00000026269 Rhox8Q6VSS7 320 aa19.67■□□□□ 0.74
Limd1-201ENSMUST00000026269 NischQ80TM9 1593 aa19.03■□□□□ 0.64
Limd1-201ENSMUST00000026269 Rpgrip1Q9EPQ2 1331 aa18.18■□□□□ 0.5
Limd1-201ENSMUST00000026269 Abcc9P70170 1546 aa18.18■□□□□ 0.5
Limd1-201ENSMUST00000026269 Ehmt2Q9Z148 1263 aaKnown RBP17.97■□□□□ 0.47
Limd1-201ENSMUST00000026269 Rtl1Q7M732 1744 aa17.8■□□□□ 0.44
Limd1-201ENSMUST00000026269 Ccdc180J3QNE4 1664 aa17.8■□□□□ 0.44
Limd1-201ENSMUST00000026269 Ccdc136Q3TVA9 1136 aa17.76■□□□□ 0.43
Limd1-201ENSMUST00000026269 Abcc8B2RUS7 1588 aa17.72■□□□□ 0.43
Limd1-201ENSMUST00000026269 Gm35339A0A140LHH9 1649 aa17.66■□□□□ 0.42
Limd1-201ENSMUST00000026269 Acin1Q9JIX8 1338 aaKnown RBP17.53■□□□□ 0.4
Limd1-201ENSMUST00000026269 Esf1Q3V1V3 845 aaKnown RBP17.47■□□□□ 0.39
Limd1-201ENSMUST00000026269 Trim41Q5NCC3 630 aa17.39■□□□□ 0.37
Limd1-201ENSMUST00000026269 Cngb1E1AZ71 1325 aa17.36■□□□□ 0.37
Limd1-201ENSMUST00000026269 HrcG5E8J6 738 aa17.3■□□□□ 0.36
Limd1-201ENSMUST00000026269 Gab3Q8BSM5 595 aa17.13■□□□□ 0.33
Limd1-201ENSMUST00000026269 Zeb1Q64318 1117 aa17.02■□□□□ 0.31
Limd1-201ENSMUST00000026269 Pcgf6Q99NA9 353 aa17.01■□□□□ 0.31
Limd1-201ENSMUST00000026269 Npm2Q80W85 207 aa16.91■□□□□ 0.3
Limd1-201ENSMUST00000026269 Zcchc6Q5BLK4 1491 aaKnown RBP16.85■□□□□ 0.29
Limd1-201ENSMUST00000026269 Dcaf1Q80TR8 1506 aa16.78■□□□□ 0.28
Limd1-201ENSMUST00000026269 Wdr66E9Q743 1299 aa16.76■□□□□ 0.27
Limd1-201ENSMUST00000026269 Myt1lP97500 1187 aa16.74■□□□□ 0.27
Limd1-201ENSMUST00000026269 Rb1cc1Q9ESK9 1588 aa16.72■□□□□ 0.27
Limd1-201ENSMUST00000026269 Supt5hO55201 1082 aaKnown RBP16.72■□□□□ 0.27
Limd1-201ENSMUST00000026269 Las1lA2BE28 776 aaKnown RBP16.71■□□□□ 0.27
Limd1-201ENSMUST00000026269 NefmP08553 848 aa16.7■□□□□ 0.26
Limd1-201ENSMUST00000026269 Ube2uB1AUC4 352 aa16.56■□□□□ 0.24
Limd1-201ENSMUST00000026269 UbtfP25976 765 aaKnown RBP16.56■□□□□ 0.24
Limd1-201ENSMUST00000026269 Cep164Q5DU05 1446 aa16.5■□□□□ 0.23
Limd1-201ENSMUST00000026269 Il27Q8K3I6 234 aa16.48■□□□□ 0.23
Limd1-201ENSMUST00000026269 Mier1Q5UAK0 511 aa16.44■□□□□ 0.22
Limd1-201ENSMUST00000026269 Baz1aO88379 1555 aa16.43■□□□□ 0.22
Limd1-201ENSMUST00000026269 Chic1Q8CBW7 227 aa16.4■□□□□ 0.22
Limd1-201ENSMUST00000026269 Neurod1Q60867 357 aa16.27■□□□□ 0.2
Limd1-201ENSMUST00000026269 Kdm5dQ62240 1548 aa16.26■□□□□ 0.19
Limd1-201ENSMUST00000026269 NacadQ5SWP3 1504 aa16.25■□□□□ 0.19
Limd1-201ENSMUST00000026269 Brd4Q9ESU6 1400 aaKnown RBP16.22■□□□□ 0.19
Limd1-201ENSMUST00000026269 Ppargc1bQ8VHJ7 1014 aa16.21■□□□□ 0.19
Limd1-201ENSMUST00000026269 Cdk11bP24788 784 aaKnown RBP16.2■□□□□ 0.18
Limd1-201ENSMUST00000026269 Sall2Q9QX96 1004 aa16.17■□□□□ 0.18
Limd1-201ENSMUST00000026269 Nop58Q6DFW4 536 aaKnown RBP16.14■□□□□ 0.17
Limd1-201ENSMUST00000026269 ScribQ80U72 1612 aa16.09■□□□□ 0.17
Limd1-201ENSMUST00000026269 Rsf1E9PWW9 1441 aaKnown RBP16.09■□□□□ 0.17
Limd1-201ENSMUST00000026269 CenpbP27790 599 aa16.08■□□□□ 0.17
Limd1-201ENSMUST00000026269 TonslQ6NZL6 1363 aa16.04■□□□□ 0.16
Limd1-201ENSMUST00000026269 Npm1Q61937 292 aaKnown RBP16.03■□□□□ 0.16
Limd1-201ENSMUST00000026269 Ap3b1Q9Z1T1 1105 aa15.99■□□□□ 0.15
Limd1-201ENSMUST00000026269 Golga3P55937 1487 aa15.98■□□□□ 0.15
Limd1-201ENSMUST00000026269 ClspnQ80YR7 1315 aa15.97■□□□□ 0.15
Limd1-201ENSMUST00000026269 Plekhg3Q4VAC9 1341 aa15.96■□□□□ 0.15
Limd1-201ENSMUST00000026269 Anks4bQ8K3X6 423 aa15.91■□□□□ 0.14
Limd1-201ENSMUST00000026269 Ccdc88bQ4QRL3 1481 aa15.9■□□□□ 0.14
Limd1-201ENSMUST00000026269 Smarca2Q6DIC0 1577 aa15.88■□□□□ 0.13
Limd1-201ENSMUST00000026269 Csrnp3P59055 597 aa15.88■□□□□ 0.13
Limd1-201ENSMUST00000026269 Fam50aQ9WV03 339 aaKnown RBP15.86■□□□□ 0.13
Limd1-201ENSMUST00000026269 Aebp2Q9Z248 504 aaKnown RBP15.82■□□□□ 0.12
Limd1-201ENSMUST00000026269 Crybg2B7ZCC2 1516 aa15.82■□□□□ 0.12
Limd1-201ENSMUST00000026269 Clip1Q922J3 1391 aa15.8■□□□□ 0.12
Limd1-201ENSMUST00000026269 Stra8P70278 393 aa15.75■□□□□ 0.11
Limd1-201ENSMUST00000026269 NclP09405 707 aaKnown RBP15.74■□□□□ 0.11
Limd1-201ENSMUST00000026269 Eid3Q3V124 375 aa15.74■□□□□ 0.11
Limd1-201ENSMUST00000026269 Slc24a1Q91WD8 1130 aa15.73■□□□□ 0.11
Limd1-201ENSMUST00000026269 Sycp2Q9CUU3 1500 aa15.73■□□□□ 0.11
Limd1-201ENSMUST00000026269 Ubl4bQ9CQ84 188 aa15.72■□□□□ 0.11
Limd1-201ENSMUST00000026269 Gm38655A0A286YDK6 273 aa15.7■□□□□ 0.1
Limd1-201ENSMUST00000026269 Tnnt3Q9QZ47 272 aa15.7■□□□□ 0.1
Limd1-201ENSMUST00000026269 Cecr2E9Q2Z1 1453 aa15.7■□□□□ 0.1
Limd1-201ENSMUST00000026269 1700123L14RikQ3V2K7 440 aa15.67■□□□□ 0.1
Limd1-201ENSMUST00000026269 Lmod2Q3UHZ5 550 aa15.64■□□□□ 0.09
Limd1-201ENSMUST00000026269 Pelp1Q9DBD5 1123 aaKnown RBP15.64■□□□□ 0.09
Limd1-201ENSMUST00000026269 Myt1Q8CFC2 1127 aa15.63■□□□□ 0.09
Limd1-201ENSMUST00000026269 Mapk8ip2Q9ERE9 830 aa15.62■□□□□ 0.09
Limd1-201ENSMUST00000026269 Aplp2Q06335 707 aa15.61■□□□□ 0.09
Limd1-201ENSMUST00000026269 Synj1Q8CHC4 1574 aa15.59■□□□□ 0.09
Limd1-201ENSMUST00000026269 CftrP26361 1476 aa15.56■□□□□ 0.08
Limd1-201ENSMUST00000026269 Cep162Q6ZQ06 1403 aa15.51■□□□□ 0.07
Limd1-201ENSMUST00000026269 Fmn1Q05860 1466 aa15.45■□□□□ 0.06
Limd1-201ENSMUST00000026269 Os9Q8K2C7 672 aa15.44■□□□□ 0.06
Limd1-201ENSMUST00000026269 Setd5Q5XJV7 1441 aa15.43■□□□□ 0.06
Limd1-201ENSMUST00000026269 Ercc6F8VPZ5 1481 aa15.43■□□□□ 0.06
Limd1-201ENSMUST00000026269 Eif5bQ05D44 1216 aaKnown RBP15.42■□□□□ 0.06
Limd1-201ENSMUST00000026269 Anp32bQ9EST5 272 aaKnown RBP15.42■□□□□ 0.06
Limd1-201ENSMUST00000026269 Kif15Q6P9L6 1387 aa15.41■□□□□ 0.06
Limd1-201ENSMUST00000026269 BlmO88700 1416 aa15.39■□□□□ 0.05
Limd1-201ENSMUST00000026269 Ifnlr1Q8CGK5 535 aa15.38■□□□□ 0.05
Limd1-201ENSMUST00000026269 Eea1Q8BL66 1411 aa15.38■□□□□ 0.05
Limd1-201ENSMUST00000026269 Rapgef2Q8CHG7 1496 aa15.37■□□□□ 0.05
Limd1-201ENSMUST00000026269 NrdcQ8BHG1 1161 aa15.36■□□□□ 0.05
Limd1-201ENSMUST00000026269 Zbtb7cQ8VCZ7 619 aa15.36■□□□□ 0.05
Limd1-201ENSMUST00000026269 Fkbp15Q6P9Q6 1216 aaKnown RBP15.34■□□□□ 0.05
Limd1-201ENSMUST00000026269 Hnrnpul2Q00PI9 745 aaKnown RBP15.32■□□□□ 0.04
Limd1-201ENSMUST00000026269 Pds5bQ4VA53 1446 aaKnown RBP15.32■□□□□ 0.04
Limd1-201ENSMUST00000026269 Anp32aO35381 247 aa15.32■□□□□ 0.04
Limd1-201ENSMUST00000026269 Cttnbp2B9EJA2 1648 aa15.3■□□□□ 0.04
Limd1-201ENSMUST00000026269 Ccdc18Q640L5 1455 aa15.26■□□□□ 0.03
Limd1-201ENSMUST00000026269 Ccer2J3QPU5 274 aa15.26■□□□□ 0.03
Limd1-201ENSMUST00000026269 Cc2d2aQ8CFW7 1633 aa15.23■□□□□ 0.03
Limd1-201ENSMUST00000026269 Smarca4Q3TKT4 1613 aaKnown RBP15.22■□□□□ 0.03
Limd1-201ENSMUST00000026269 SafbD3YXK2 937 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms