RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 NischQ80TM9 1593 aa30.56■■■□□ 2.48
Trim8-201ENSMUST00000026008 Abcc9P70170 1546 aa29.56■■■□□ 2.32
Trim8-201ENSMUST00000026008 Gm35339A0A140LHH9 1649 aa29.52■■■□□ 2.32
Trim8-201ENSMUST00000026008 Rhox8Q6VSS7 320 aa29.23■■■□□ 2.27
Trim8-201ENSMUST00000026008 Abcc8B2RUS7 1588 aa28.87■■■□□ 2.21
Trim8-201ENSMUST00000026008 Rtl1Q7M732 1744 aa28.21■■■□□ 2.11
Trim8-201ENSMUST00000026008 Ccdc180J3QNE4 1664 aa27.94■■■□□ 2.06
Trim8-201ENSMUST00000026008 Zcchc6Q5BLK4 1491 aaKnown RBP27.34■■□□□ 1.97
Trim8-201ENSMUST00000026008 Rpgrip1Q9EPQ2 1331 aa27.13■■□□□ 1.93
Trim8-201ENSMUST00000026008 Ccdc136Q3TVA9 1136 aa27.09■■□□□ 1.93
Trim8-201ENSMUST00000026008 Ehmt2Q9Z148 1263 aaKnown RBP27.07■■□□□ 1.92
Trim8-201ENSMUST00000026008 ScribQ80U72 1612 aa27.02■■□□□ 1.92
Trim8-201ENSMUST00000026008 Rb1cc1Q9ESK9 1588 aa26.81■■□□□ 1.88
Trim8-201ENSMUST00000026008 Acin1Q9JIX8 1338 aaKnown RBP26.79■■□□□ 1.88
Trim8-201ENSMUST00000026008 HrcG5E8J6 738 aa26.76■■□□□ 1.87
Trim8-201ENSMUST00000026008 Dcaf1Q80TR8 1506 aa26.73■■□□□ 1.87
Trim8-201ENSMUST00000026008 Kdm5dQ62240 1548 aa26.55■■□□□ 1.84
Trim8-201ENSMUST00000026008 Trim41Q5NCC3 630 aa26.47■■□□□ 1.83
Trim8-201ENSMUST00000026008 Baz1aO88379 1555 aa26.42■■□□□ 1.82
Trim8-201ENSMUST00000026008 NacadQ5SWP3 1504 aa26.26■■□□□ 1.79
Trim8-201ENSMUST00000026008 Pcgf6Q99NA9 353 aa25.97■■□□□ 1.75
Trim8-201ENSMUST00000026008 Cep164Q5DU05 1446 aa25.86■■□□□ 1.73
Trim8-201ENSMUST00000026008 Cngb1E1AZ71 1325 aa25.85■■□□□ 1.73
Trim8-201ENSMUST00000026008 Smarca2Q6DIC0 1577 aa25.82■■□□□ 1.72
Trim8-201ENSMUST00000026008 Gab3Q8BSM5 595 aa25.8■■□□□ 1.72
Trim8-201ENSMUST00000026008 Sycp2Q9CUU3 1500 aa25.71■■□□□ 1.71
Trim8-201ENSMUST00000026008 Chic1Q8CBW7 227 aa25.7■■□□□ 1.7
Trim8-201ENSMUST00000026008 Crybg2B7ZCC2 1516 aa25.66■■□□□ 1.7
Trim8-201ENSMUST00000026008 Supt5hO55201 1082 aaKnown RBP25.57■■□□□ 1.68
Trim8-201ENSMUST00000026008 Rsf1E9PWW9 1441 aaKnown RBP25.55■■□□□ 1.68
Trim8-201ENSMUST00000026008 Cecr2E9Q2Z1 1453 aa25.38■■□□□ 1.65
Trim8-201ENSMUST00000026008 Brd4Q9ESU6 1400 aaKnown RBP25.37■■□□□ 1.65
Trim8-201ENSMUST00000026008 Ccdc88bQ4QRL3 1481 aa25.35■■□□□ 1.65
Trim8-201ENSMUST00000026008 Zeb1Q64318 1117 aa25.35■■□□□ 1.65
Trim8-201ENSMUST00000026008 Esf1Q3V1V3 845 aaKnown RBP25.31■■□□□ 1.64
Trim8-201ENSMUST00000026008 Golga3P55937 1487 aa25.22■■□□□ 1.63
Trim8-201ENSMUST00000026008 BicraF8VPZ9 1578 aa25.2■■□□□ 1.63
Trim8-201ENSMUST00000026008 Mier1Q5UAK0 511 aa25.2■■□□□ 1.62
Trim8-201ENSMUST00000026008 Synj1Q8CHC4 1574 aa25.13■■□□□ 1.61
Trim8-201ENSMUST00000026008 NefmP08553 848 aa25.06■■□□□ 1.6
Trim8-201ENSMUST00000026008 Neurod1Q60867 357 aa24.95■■□□□ 1.58
Trim8-201ENSMUST00000026008 CftrP26361 1476 aa24.92■■□□□ 1.58
Trim8-201ENSMUST00000026008 UbtfP25976 765 aaKnown RBP24.91■■□□□ 1.58
Trim8-201ENSMUST00000026008 Sall2Q9QX96 1004 aa24.84■■□□□ 1.57
Trim8-201ENSMUST00000026008 Myt1lP97500 1187 aa24.78■■□□□ 1.56
Trim8-201ENSMUST00000026008 Top2bQ64511 1612 aa24.71■■□□□ 1.55
Trim8-201ENSMUST00000026008 Wdr66E9Q743 1299 aa24.65■■□□□ 1.54
Trim8-201ENSMUST00000026008 Cc2d2aQ8CFW7 1633 aa24.65■■□□□ 1.54
Trim8-201ENSMUST00000026008 Cttnbp2B9EJA2 1648 aa24.64■■□□□ 1.53
Trim8-201ENSMUST00000026008 Smarca4Q3TKT4 1613 aaKnown RBP24.57■■□□□ 1.52
Trim8-201ENSMUST00000026008 Npm2Q80W85 207 aa24.56■■□□□ 1.52
Trim8-201ENSMUST00000026008 Las1lA2BE28 776 aaKnown RBP24.56■■□□□ 1.52
Trim8-201ENSMUST00000026008 Rapgef2Q8CHG7 1496 aa24.52■■□□□ 1.52
Trim8-201ENSMUST00000026008 Aebp2Q9Z248 504 aaKnown RBP24.52■■□□□ 1.52
Trim8-201ENSMUST00000026008 Ppargc1bQ8VHJ7 1014 aa24.5■■□□□ 1.51
Trim8-201ENSMUST00000026008 Fmn1Q05860 1466 aa24.43■■□□□ 1.5
Trim8-201ENSMUST00000026008 Cep162Q6ZQ06 1403 aa24.42■■□□□ 1.5
Trim8-201ENSMUST00000026008 Plekhg3Q4VAC9 1341 aa24.39■■□□□ 1.49
Trim8-201ENSMUST00000026008 Top2aQ01320 1528 aaKnown RBP24.35■■□□□ 1.49
Trim8-201ENSMUST00000026008 Iqgap2Q3UQ44 1575 aa24.32■■□□□ 1.48
Trim8-201ENSMUST00000026008 Clip1Q922J3 1391 aa24.27■■□□□ 1.47
Trim8-201ENSMUST00000026008 Il27Q8K3I6 234 aa24.22■■□□□ 1.47
Trim8-201ENSMUST00000026008 TonslQ6NZL6 1363 aa24.22■■□□□ 1.47
Trim8-201ENSMUST00000026008 Anks4bQ8K3X6 423 aa24.22■■□□□ 1.47
Trim8-201ENSMUST00000026008 ClspnQ80YR7 1315 aa24.21■■□□□ 1.47
Trim8-201ENSMUST00000026008 Atad2bE9Q166 1460 aaKnown RBP24.2■■□□□ 1.46
Trim8-201ENSMUST00000026008 Csrnp3P59055 597 aa24.17■■□□□ 1.46
Trim8-201ENSMUST00000026008 Nop58Q6DFW4 536 aaKnown RBP24.16■■□□□ 1.46
Trim8-201ENSMUST00000026008 Cdk11bP24788 784 aaKnown RBP24.16■■□□□ 1.46
Trim8-201ENSMUST00000026008 Ap3b1Q9Z1T1 1105 aa24.13■■□□□ 1.45
Trim8-201ENSMUST00000026008 Pds5bQ4VA53 1446 aaKnown RBP24.11■■□□□ 1.45
Trim8-201ENSMUST00000026008 1700123L14RikQ3V2K7 440 aa24.03■■□□□ 1.44
Trim8-201ENSMUST00000026008 Eid3Q3V124 375 aa23.97■■□□□ 1.43
Trim8-201ENSMUST00000026008 Frmpd1A2AKB4 1549 aa23.92■■□□□ 1.42
Trim8-201ENSMUST00000026008 Ncapd3Q6ZQK0 1506 aa23.91■■□□□ 1.42
Trim8-201ENSMUST00000026008 PtprkP35822 1457 aa23.89■■□□□ 1.42
Trim8-201ENSMUST00000026008 Eif4g1Q6NZJ6 1600 aaKnown RBP23.89■■□□□ 1.41
Trim8-201ENSMUST00000026008 Arhgap35Q91YM2 1499 aa23.88■■□□□ 1.41
Trim8-201ENSMUST00000026008 Kif15Q6P9L6 1387 aa23.87■■□□□ 1.41
Trim8-201ENSMUST00000026008 Eea1Q8BL66 1411 aa23.83■■□□□ 1.4
Trim8-201ENSMUST00000026008 Setd5Q5XJV7 1441 aa23.8■■□□□ 1.4
Trim8-201ENSMUST00000026008 Arap1Q4LDD4 1452 aa23.8■■□□□ 1.4
Trim8-201ENSMUST00000026008 Wdr62Q3U3T8 1523 aa23.79■■□□□ 1.4
Trim8-201ENSMUST00000026008 Ercc6F8VPZ5 1481 aa23.77■■□□□ 1.4
Trim8-201ENSMUST00000026008 Gm38655A0A286YDK6 273 aa23.76■■□□□ 1.39
Trim8-201ENSMUST00000026008 TnnQ80Z71 1560 aa23.75■■□□□ 1.39
Trim8-201ENSMUST00000026008 NrkQ9R0G8 1455 aa23.68■■□□□ 1.38
Trim8-201ENSMUST00000026008 Mapk8ip2Q9ERE9 830 aa23.65■■□□□ 1.38
Trim8-201ENSMUST00000026008 Fam50aQ9WV03 339 aaKnown RBP23.64■■□□□ 1.37
Trim8-201ENSMUST00000026008 Ubl4bQ9CQ84 188 aa23.63■■□□□ 1.37
Trim8-201ENSMUST00000026008 Arhgef5E9Q7D5 1581 aa23.62■■□□□ 1.37
Trim8-201ENSMUST00000026008 Lmod2Q3UHZ5 550 aa23.61■■□□□ 1.37
Trim8-201ENSMUST00000026008 BlmO88700 1416 aa23.61■■□□□ 1.37
Trim8-201ENSMUST00000026008 Aplp2Q06335 707 aa23.59■■□□□ 1.37
Trim8-201ENSMUST00000026008 Shroom4Q1W617 1475 aa23.59■■□□□ 1.37
Trim8-201ENSMUST00000026008 Ccdc18Q640L5 1455 aa23.58■■□□□ 1.37
Trim8-201ENSMUST00000026008 Lamc3Q9R0B6 1581 aa23.54■■□□□ 1.36
Trim8-201ENSMUST00000026008 Npm1Q61937 292 aaKnown RBP23.52■■□□□ 1.35
Trim8-201ENSMUST00000026008 Unc13aQ4KUS2 1712 aa23.49■■□□□ 1.35
Trim8-201ENSMUST00000026008 CenpbP27790 599 aa23.49■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms