RNA–Protein interactions for RNA: ENSMUST00000022369.8

Vcl-201, Transcript of Vinculin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcl, Length 5,267 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcl-201ENSMUST00000022369 Rhox8Q6VSS7 320 aa22.73■■□□□ 1.23
Vcl-201ENSMUST00000022369 Rpgrip1Q9EPQ2 1331 aa21.01■□□□□ 0.95
Vcl-201ENSMUST00000022369 Ehmt2Q9Z148 1263 aaKnown RBP20.45■□□□□ 0.86
Vcl-201ENSMUST00000022369 Ccdc136Q3TVA9 1136 aa20.15■□□□□ 0.82
Vcl-201ENSMUST00000022369 Las1lA2BE28 776 aaKnown RBP20.09■□□□□ 0.81
Vcl-201ENSMUST00000022369 Cngb1E1AZ71 1325 aa20.08■□□□□ 0.81
Vcl-201ENSMUST00000022369 Esf1Q3V1V3 845 aaKnown RBP19.97■□□□□ 0.79
Vcl-201ENSMUST00000022369 Wdr66E9Q743 1299 aa19.94■□□□□ 0.78
Vcl-201ENSMUST00000022369 Trim41Q5NCC3 630 aa19.8■□□□□ 0.76
Vcl-201ENSMUST00000022369 Gab3Q8BSM5 595 aa19.77■□□□□ 0.76
Vcl-201ENSMUST00000022369 NischQ80TM9 1593 aa19.76■□□□□ 0.75
Vcl-201ENSMUST00000022369 Zeb1Q64318 1117 aa19.75■□□□□ 0.75
Vcl-201ENSMUST00000022369 Ube2uB1AUC4 352 aa19.66■□□□□ 0.74
Vcl-201ENSMUST00000022369 Pelp1Q9DBD5 1123 aaKnown RBP19.62■□□□□ 0.73
Vcl-201ENSMUST00000022369 Npm2Q80W85 207 aa19.58■□□□□ 0.72
Vcl-201ENSMUST00000022369 Myt1lP97500 1187 aa19.43■□□□□ 0.7
Vcl-201ENSMUST00000022369 Acin1Q9JIX8 1338 aaKnown RBP19.42■□□□□ 0.7
Vcl-201ENSMUST00000022369 NefmP08553 848 aa19.28■□□□□ 0.68
Vcl-201ENSMUST00000022369 CenpbP27790 599 aa19.15■□□□□ 0.66
Vcl-201ENSMUST00000022369 UbtfP25976 765 aaKnown RBP19.11■□□□□ 0.65
Vcl-201ENSMUST00000022369 Ccdc180J3QNE4 1664 aa19.04■□□□□ 0.64
Vcl-201ENSMUST00000022369 HrcG5E8J6 738 aa19.04■□□□□ 0.64
Vcl-201ENSMUST00000022369 Stra8P70278 393 aa19.02■□□□□ 0.64
Vcl-201ENSMUST00000022369 Slc24a1Q91WD8 1130 aa18.79■□□□□ 0.6
Vcl-201ENSMUST00000022369 Rtl1Q7M732 1744 aa18.78■□□□□ 0.6
Vcl-201ENSMUST00000022369 Cdk11bP24788 784 aaKnown RBP18.75■□□□□ 0.59
Vcl-201ENSMUST00000022369 Amer1Q7TS75 1132 aa18.74■□□□□ 0.59
Vcl-201ENSMUST00000022369 Pcgf6Q99NA9 353 aa18.73■□□□□ 0.59
Vcl-201ENSMUST00000022369 Il27Q8K3I6 234 aa18.67■□□□□ 0.58
Vcl-201ENSMUST00000022369 Zcchc6Q5BLK4 1491 aaKnown RBP18.55■□□□□ 0.56
Vcl-201ENSMUST00000022369 Nop58Q6DFW4 536 aaKnown RBP18.53■□□□□ 0.56
Vcl-201ENSMUST00000022369 Tnnt3Q9QZ47 272 aa18.52■□□□□ 0.56
Vcl-201ENSMUST00000022369 Fam50aQ9WV03 339 aaKnown RBP18.5■□□□□ 0.55
Vcl-201ENSMUST00000022369 NrdcQ8BHG1 1161 aa18.48■□□□□ 0.55
Vcl-201ENSMUST00000022369 NclP09405 707 aaKnown RBP18.46■□□□□ 0.55
Vcl-201ENSMUST00000022369 Anp32bQ9EST5 272 aaKnown RBP18.45■□□□□ 0.54
Vcl-201ENSMUST00000022369 Ap3b1Q9Z1T1 1105 aa18.44■□□□□ 0.54
Vcl-201ENSMUST00000022369 Myt1Q8CFC2 1127 aa18.43■□□□□ 0.54
Vcl-201ENSMUST00000022369 Supt5hO55201 1082 aaKnown RBP18.37■□□□□ 0.53
Vcl-201ENSMUST00000022369 Neurod1Q60867 357 aa18.37■□□□□ 0.53
Vcl-201ENSMUST00000022369 Abcc9P70170 1546 aa18.37■□□□□ 0.53
Vcl-201ENSMUST00000022369 TonslQ6NZL6 1363 aa18.35■□□□□ 0.53
Vcl-201ENSMUST00000022369 Ppargc1bQ8VHJ7 1014 aa18.31■□□□□ 0.52
Vcl-201ENSMUST00000022369 NeflP08551 543 aa18.29■□□□□ 0.52
Vcl-201ENSMUST00000022369 Ttbk1Q6PCN3 1308 aa18.26■□□□□ 0.51
Vcl-201ENSMUST00000022369 Eif5bQ05D44 1216 aaKnown RBP18.25■□□□□ 0.51
Vcl-201ENSMUST00000022369 Mier1Q5UAK0 511 aa18.24■□□□□ 0.51
Vcl-201ENSMUST00000022369 4933416C03RikQ3V063 378 aa18.22■□□□□ 0.51
Vcl-201ENSMUST00000022369 Os9Q8K2C7 672 aa18.17■□□□□ 0.5
Vcl-201ENSMUST00000022369 Gm35339A0A140LHH9 1649 aa18.12■□□□□ 0.49
Vcl-201ENSMUST00000022369 4930567H17RikQ3V0K5 233 aa18.07■□□□□ 0.48
Vcl-201ENSMUST00000022369 Rtl5Q5DTT4 599 aa18.04■□□□□ 0.48
Vcl-201ENSMUST00000022369 ClspnQ80YR7 1315 aa18.02■□□□□ 0.48
Vcl-201ENSMUST00000022369 Plekhg3Q4VAC9 1341 aa17.96■□□□□ 0.47
Vcl-201ENSMUST00000022369 Lmod2Q3UHZ5 550 aa17.94■□□□□ 0.46
Vcl-201ENSMUST00000022369 Npm1Q61937 292 aaKnown RBP17.92■□□□□ 0.46
Vcl-201ENSMUST00000022369 Abcc8B2RUS7 1588 aa17.92■□□□□ 0.46
Vcl-201ENSMUST00000022369 Anp32aO35381 247 aa17.82■□□□□ 0.44
Vcl-201ENSMUST00000022369 Zbtb7cQ8VCZ7 619 aa17.79■□□□□ 0.44
Vcl-201ENSMUST00000022369 Dcaf1Q80TR8 1506 aa17.74■□□□□ 0.43
Vcl-201ENSMUST00000022369 Hnrnpul2Q00PI9 745 aaKnown RBP17.74■□□□□ 0.43
Vcl-201ENSMUST00000022369 Brd4Q9ESU6 1400 aaKnown RBP17.73■□□□□ 0.43
Vcl-201ENSMUST00000022369 Cep164Q5DU05 1446 aa17.72■□□□□ 0.43
Vcl-201ENSMUST00000022369 Clip1Q922J3 1391 aa17.69■□□□□ 0.42
Vcl-201ENSMUST00000022369 Eid3Q3V124 375 aa17.69■□□□□ 0.42
Vcl-201ENSMUST00000022369 Sall2Q9QX96 1004 aa17.69■□□□□ 0.42
Vcl-201ENSMUST00000022369 Mapk8ip2Q9ERE9 830 aa17.65■□□□□ 0.42
Vcl-201ENSMUST00000022369 Anks4bQ8K3X6 423 aa17.64■□□□□ 0.41
Vcl-201ENSMUST00000022369 Chic1Q8CBW7 227 aa17.63■□□□□ 0.41
Vcl-201ENSMUST00000022369 Ccer2J3QPU5 274 aa17.6■□□□□ 0.41
Vcl-201ENSMUST00000022369 DaxxO35613 739 aa17.6■□□□□ 0.41
Vcl-201ENSMUST00000022369 Zbtb4Q5F293 982 aa17.59■□□□□ 0.41
Vcl-201ENSMUST00000022369 Nlrp6Q91WS2 869 aa17.58■□□□□ 0.41
Vcl-201ENSMUST00000022369 Erich6D3Z6S9 713 aa17.54■□□□□ 0.4
Vcl-201ENSMUST00000022369 Hdac5Q9Z2V6 1113 aa17.54■□□□□ 0.4
Vcl-201ENSMUST00000022369 Gm13697A2AK42 830 aa17.53■□□□□ 0.4
Vcl-201ENSMUST00000022369 Csrnp3P59055 597 aa17.5■□□□□ 0.39
Vcl-201ENSMUST00000022369 Gm38655A0A286YDK6 273 aa17.49■□□□□ 0.39
Vcl-201ENSMUST00000022369 Aplp2Q06335 707 aa17.48■□□□□ 0.39
Vcl-201ENSMUST00000022369 Ifnlr1Q8CGK5 535 aa17.47■□□□□ 0.39
Vcl-201ENSMUST00000022369 DiexfQ8BTT6 772 aaKnown RBP17.47■□□□□ 0.39
Vcl-201ENSMUST00000022369 Atp1b4Q99ME6 356 aa17.44■□□□□ 0.38
Vcl-201ENSMUST00000022369 Polr3glQ8R0C0 218 aa17.44■□□□□ 0.38
Vcl-201ENSMUST00000022369 Rb1cc1Q9ESK9 1588 aa17.42■□□□□ 0.38
Vcl-201ENSMUST00000022369 Prdm10Q3UTQ7 1184 aa17.41■□□□□ 0.38
Vcl-201ENSMUST00000022369 Calr4Q3TQS0 420 aa17.4■□□□□ 0.38
Vcl-201ENSMUST00000022369 Fkbp15Q6P9Q6 1216 aaKnown RBP17.38■□□□□ 0.37
Vcl-201ENSMUST00000022369 Upf2A2AT37 1269 aaKnown RBP17.35■□□□□ 0.37
Vcl-201ENSMUST00000022369 Ppp4r2Q0VGB7 417 aa17.33■□□□□ 0.36
Vcl-201ENSMUST00000022369 Chic2Q9D9G3 165 aa17.3■□□□□ 0.36
Vcl-201ENSMUST00000022369 BlmO88700 1416 aa17.29■□□□□ 0.36
Vcl-201ENSMUST00000022369 ArxO35085 564 aa17.29■□□□□ 0.36
Vcl-201ENSMUST00000022369 Mrs2Q5NCE8 434 aa17.28■□□□□ 0.36
Vcl-201ENSMUST00000022369 Gm13695A2AK44 830 aa17.27■□□□□ 0.35
Vcl-201ENSMUST00000022369 Ubl4bQ9CQ84 188 aa17.26■□□□□ 0.35
Vcl-201ENSMUST00000022369 Wdr43Q6ZQL4 677 aaKnown RBP17.25■□□□□ 0.35
Vcl-201ENSMUST00000022369 Clstn2Q9ER65 966 aa17.2■□□□□ 0.34
Vcl-201ENSMUST00000022369 Rad21Q61550 635 aaKnown RBP17.2■□□□□ 0.34
Vcl-201ENSMUST00000022369 Setd5Q5XJV7 1441 aa17.19■□□□□ 0.34
Vcl-201ENSMUST00000022369 Golga3P55937 1487 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms