RNA–Protein interactions for RNA: ENSMUST00000022053.10

Trip13-201, Transcript of Pachytene checkpoint protein 2 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trip13, Length 3,399 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trip13-201ENSMUST00000022053 NischQ80TM9 1593 aa23.04■■□□□ 1.28
Trip13-201ENSMUST00000022053 Rhox8Q6VSS7 320 aa22.3■■□□□ 1.16
Trip13-201ENSMUST00000022053 Gm35339A0A140LHH9 1649 aa22.26■■□□□ 1.15
Trip13-201ENSMUST00000022053 Abcc9P70170 1546 aa22.24■■□□□ 1.15
Trip13-201ENSMUST00000022053 Abcc8B2RUS7 1588 aa21.73■■□□□ 1.07
Trip13-201ENSMUST00000022053 Rtl1Q7M732 1744 aa21.2■□□□□ 0.98
Trip13-201ENSMUST00000022053 Ccdc180J3QNE4 1664 aa21.08■□□□□ 0.96
Trip13-201ENSMUST00000022053 Ehmt2Q9Z148 1263 aaKnown RBP20.74■□□□□ 0.91
Trip13-201ENSMUST00000022053 Ccdc136Q3TVA9 1136 aa20.66■□□□□ 0.9
Trip13-201ENSMUST00000022053 Rpgrip1Q9EPQ2 1331 aa20.63■□□□□ 0.89
Trip13-201ENSMUST00000022053 Zcchc6Q5BLK4 1491 aaKnown RBP20.62■□□□□ 0.89
Trip13-201ENSMUST00000022053 Acin1Q9JIX8 1338 aaKnown RBP20.38■□□□□ 0.85
Trip13-201ENSMUST00000022053 HrcG5E8J6 738 aa20.29■□□□□ 0.84
Trip13-201ENSMUST00000022053 Rb1cc1Q9ESK9 1588 aa20.21■□□□□ 0.83
Trip13-201ENSMUST00000022053 Trim41Q5NCC3 630 aa20.16■□□□□ 0.82
Trip13-201ENSMUST00000022053 Dcaf1Q80TR8 1506 aa20.11■□□□□ 0.81
Trip13-201ENSMUST00000022053 ScribQ80U72 1612 aa20.1■□□□□ 0.81
Trip13-201ENSMUST00000022053 Baz1aO88379 1555 aa19.9■□□□□ 0.78
Trip13-201ENSMUST00000022053 Kdm5dQ62240 1548 aa19.88■□□□□ 0.77
Trip13-201ENSMUST00000022053 Pcgf6Q99NA9 353 aa19.83■□□□□ 0.76
Trip13-201ENSMUST00000022053 Gab3Q8BSM5 595 aa19.71■□□□□ 0.75
Trip13-201ENSMUST00000022053 Cngb1E1AZ71 1325 aa19.71■□□□□ 0.75
Trip13-201ENSMUST00000022053 NacadQ5SWP3 1504 aa19.63■□□□□ 0.73
Trip13-201ENSMUST00000022053 Cep164Q5DU05 1446 aa19.57■□□□□ 0.72
Trip13-201ENSMUST00000022053 Chic1Q8CBW7 227 aa19.55■□□□□ 0.72
Trip13-201ENSMUST00000022053 Supt5hO55201 1082 aaKnown RBP19.52■□□□□ 0.72
Trip13-201ENSMUST00000022053 Smarca2Q6DIC0 1577 aa19.43■□□□□ 0.7
Trip13-201ENSMUST00000022053 Zeb1Q64318 1117 aa19.4■□□□□ 0.7
Trip13-201ENSMUST00000022053 Rsf1E9PWW9 1441 aaKnown RBP19.36■□□□□ 0.69
Trip13-201ENSMUST00000022053 Esf1Q3V1V3 845 aaKnown RBP19.29■□□□□ 0.68
Trip13-201ENSMUST00000022053 Crybg2B7ZCC2 1516 aa19.28■□□□□ 0.68
Trip13-201ENSMUST00000022053 Ccdc88bQ4QRL3 1481 aa19.21■□□□□ 0.67
Trip13-201ENSMUST00000022053 Mier1Q5UAK0 511 aa19.2■□□□□ 0.66
Trip13-201ENSMUST00000022053 Sycp2Q9CUU3 1500 aa19.19■□□□□ 0.66
Trip13-201ENSMUST00000022053 Brd4Q9ESU6 1400 aaKnown RBP19.18■□□□□ 0.66
Trip13-201ENSMUST00000022053 Cecr2E9Q2Z1 1453 aa19.18■□□□□ 0.66
Trip13-201ENSMUST00000022053 Golga3P55937 1487 aa19.07■□□□□ 0.64
Trip13-201ENSMUST00000022053 NefmP08553 848 aa19.07■□□□□ 0.64
Trip13-201ENSMUST00000022053 Neurod1Q60867 357 aa19.06■□□□□ 0.64
Trip13-201ENSMUST00000022053 UbtfP25976 765 aaKnown RBP19.02■□□□□ 0.64
Trip13-201ENSMUST00000022053 Synj1Q8CHC4 1574 aa18.96■□□□□ 0.63
Trip13-201ENSMUST00000022053 Sall2Q9QX96 1004 aa18.96■□□□□ 0.63
Trip13-201ENSMUST00000022053 Myt1lP97500 1187 aa18.93■□□□□ 0.62
Trip13-201ENSMUST00000022053 Wdr66E9Q743 1299 aa18.85■□□□□ 0.61
Trip13-201ENSMUST00000022053 CftrP26361 1476 aa18.82■□□□□ 0.6
Trip13-201ENSMUST00000022053 Ppargc1bQ8VHJ7 1014 aa18.8■□□□□ 0.6
Trip13-201ENSMUST00000022053 Las1lA2BE28 776 aaKnown RBP18.73■□□□□ 0.59
Trip13-201ENSMUST00000022053 BicraF8VPZ9 1578 aa18.73■□□□□ 0.59
Trip13-201ENSMUST00000022053 Npm2Q80W85 207 aa18.72■□□□□ 0.59
Trip13-201ENSMUST00000022053 Aebp2Q9Z248 504 aaKnown RBP18.7■□□□□ 0.58
Trip13-201ENSMUST00000022053 Plekhg3Q4VAC9 1341 aa18.59■□□□□ 0.57
Trip13-201ENSMUST00000022053 Top2bQ64511 1612 aa18.58■□□□□ 0.56
Trip13-201ENSMUST00000022053 Cc2d2aQ8CFW7 1633 aa18.57■□□□□ 0.56
Trip13-201ENSMUST00000022053 Cttnbp2B9EJA2 1648 aa18.53■□□□□ 0.56
Trip13-201ENSMUST00000022053 Rapgef2Q8CHG7 1496 aa18.52■□□□□ 0.56
Trip13-201ENSMUST00000022053 Cep162Q6ZQ06 1403 aa18.49■□□□□ 0.55
Trip13-201ENSMUST00000022053 Csrnp3P59055 597 aa18.48■□□□□ 0.55
Trip13-201ENSMUST00000022053 Nop58Q6DFW4 536 aaKnown RBP18.45■□□□□ 0.54
Trip13-201ENSMUST00000022053 Anks4bQ8K3X6 423 aa18.45■□□□□ 0.54
Trip13-201ENSMUST00000022053 Fmn1Q05860 1466 aa18.44■□□□□ 0.54
Trip13-201ENSMUST00000022053 TonslQ6NZL6 1363 aa18.44■□□□□ 0.54
Trip13-201ENSMUST00000022053 Cdk11bP24788 784 aaKnown RBP18.44■□□□□ 0.54
Trip13-201ENSMUST00000022053 Clip1Q922J3 1391 aa18.44■□□□□ 0.54
Trip13-201ENSMUST00000022053 ClspnQ80YR7 1315 aa18.43■□□□□ 0.54
Trip13-201ENSMUST00000022053 Smarca4Q3TKT4 1613 aaKnown RBP18.42■□□□□ 0.54
Trip13-201ENSMUST00000022053 Ap3b1Q9Z1T1 1105 aa18.42■□□□□ 0.54
Trip13-201ENSMUST00000022053 Il27Q8K3I6 234 aa18.41■□□□□ 0.54
Trip13-201ENSMUST00000022053 Top2aQ01320 1528 aaKnown RBP18.36■□□□□ 0.53
Trip13-201ENSMUST00000022053 1700123L14RikQ3V2K7 440 aa18.36■□□□□ 0.53
Trip13-201ENSMUST00000022053 Eid3Q3V124 375 aa18.32■□□□□ 0.52
Trip13-201ENSMUST00000022053 Gm38655A0A286YDK6 273 aa18.23■□□□□ 0.51
Trip13-201ENSMUST00000022053 Iqgap2Q3UQ44 1575 aa18.19■□□□□ 0.5
Trip13-201ENSMUST00000022053 Mapk8ip2Q9ERE9 830 aa18.12■□□□□ 0.49
Trip13-201ENSMUST00000022053 PtprkP35822 1457 aa18.08■□□□□ 0.49
Trip13-201ENSMUST00000022053 Ncapd3Q6ZQK0 1506 aa18.08■□□□□ 0.49
Trip13-201ENSMUST00000022053 Setd5Q5XJV7 1441 aa18.07■□□□□ 0.48
Trip13-201ENSMUST00000022053 Eea1Q8BL66 1411 aa18.06■□□□□ 0.48
Trip13-201ENSMUST00000022053 Fam50aQ9WV03 339 aaKnown RBP18.05■□□□□ 0.48
Trip13-201ENSMUST00000022053 Arhgap35Q91YM2 1499 aa18.05■□□□□ 0.48
Trip13-201ENSMUST00000022053 Atad2bE9Q166 1460 aaKnown RBP18.03■□□□□ 0.48
Trip13-201ENSMUST00000022053 Lmod2Q3UHZ5 550 aa18.02■□□□□ 0.48
Trip13-201ENSMUST00000022053 Arap1Q4LDD4 1452 aa18.01■□□□□ 0.47
Trip13-201ENSMUST00000022053 Kif15Q6P9L6 1387 aa18■□□□□ 0.47
Trip13-201ENSMUST00000022053 Aplp2Q06335 707 aa17.98■□□□□ 0.47
Trip13-201ENSMUST00000022053 Eif4g1Q6NZJ6 1600 aaKnown RBP17.95■□□□□ 0.46
Trip13-201ENSMUST00000022053 CenpbP27790 599 aa17.95■□□□□ 0.46
Trip13-201ENSMUST00000022053 BlmO88700 1416 aa17.94■□□□□ 0.46
Trip13-201ENSMUST00000022053 NclP09405 707 aaKnown RBP17.91■□□□□ 0.46
Trip13-201ENSMUST00000022053 Pds5bQ4VA53 1446 aaKnown RBP17.9■□□□□ 0.46
Trip13-201ENSMUST00000022053 Frmpd1A2AKB4 1549 aa17.85■□□□□ 0.45
Trip13-201ENSMUST00000022053 NrkQ9R0G8 1455 aa17.85■□□□□ 0.45
Trip13-201ENSMUST00000022053 Hnrnpul2Q00PI9 745 aaKnown RBP17.85■□□□□ 0.45
Trip13-201ENSMUST00000022053 Arhgef5E9Q7D5 1581 aa17.84■□□□□ 0.45
Trip13-201ENSMUST00000022053 TnnQ80Z71 1560 aa17.84■□□□□ 0.45
Trip13-201ENSMUST00000022053 Ccdc18Q640L5 1455 aa17.83■□□□□ 0.45
Trip13-201ENSMUST00000022053 SafbD3YXK2 937 aaKnown RBP17.82■□□□□ 0.44
Trip13-201ENSMUST00000022053 Ube2uB1AUC4 352 aa17.81■□□□□ 0.44
Trip13-201ENSMUST00000022053 Shroom4Q1W617 1475 aa17.81■□□□□ 0.44
Trip13-201ENSMUST00000022053 AqrQ8CFQ3 1481 aaKnown RBP17.79■□□□□ 0.44
Trip13-201ENSMUST00000022053 Baz1bQ9Z277 1479 aa17.78■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms