RNA–Protein interactions for RNA: ENSMUST00000021554.15

Actn1-201, Transcript of Alpha-actinin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actn1, Length 3,734 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actn1-201ENSMUST00000021554 Rhox8Q6VSS7 320 aa23.22■■□□□ 1.31
Actn1-201ENSMUST00000021554 NischQ80TM9 1593 aa23.03■■□□□ 1.28
Actn1-201ENSMUST00000021554 Abcc9P70170 1546 aa21.99■■□□□ 1.11
Actn1-201ENSMUST00000021554 Abcc8B2RUS7 1588 aa21.59■■□□□ 1.05
Actn1-201ENSMUST00000021554 Gm35339A0A140LHH9 1649 aa21.5■■□□□ 1.03
Actn1-201ENSMUST00000021554 Ccdc136Q3TVA9 1136 aa21.35■■□□□ 1.01
Actn1-201ENSMUST00000021554 Ehmt2Q9Z148 1263 aaKnown RBP21.16■□□□□ 0.98
Actn1-201ENSMUST00000021554 Ccdc180J3QNE4 1664 aa20.72■□□□□ 0.91
Actn1-201ENSMUST00000021554 Rtl1Q7M732 1744 aa20.67■□□□□ 0.9
Actn1-201ENSMUST00000021554 Trim41Q5NCC3 630 aa20.62■□□□□ 0.89
Actn1-201ENSMUST00000021554 Cngb1E1AZ71 1325 aa20.51■□□□□ 0.87
Actn1-201ENSMUST00000021554 Rpgrip1Q9EPQ2 1331 aa20.46■□□□□ 0.87
Actn1-201ENSMUST00000021554 Gab3Q8BSM5 595 aa20.42■□□□□ 0.86
Actn1-201ENSMUST00000021554 Zcchc6Q5BLK4 1491 aaKnown RBP20.34■□□□□ 0.85
Actn1-201ENSMUST00000021554 HrcG5E8J6 738 aa20.32■□□□□ 0.84
Actn1-201ENSMUST00000021554 Esf1Q3V1V3 845 aaKnown RBP20.28■□□□□ 0.84
Actn1-201ENSMUST00000021554 Rb1cc1Q9ESK9 1588 aa20.19■□□□□ 0.82
Actn1-201ENSMUST00000021554 Acin1Q9JIX8 1338 aaKnown RBP20.16■□□□□ 0.82
Actn1-201ENSMUST00000021554 Dcaf1Q80TR8 1506 aa19.99■□□□□ 0.79
Actn1-201ENSMUST00000021554 Kdm5dQ62240 1548 aa19.88■□□□□ 0.77
Actn1-201ENSMUST00000021554 ScribQ80U72 1612 aa19.87■□□□□ 0.77
Actn1-201ENSMUST00000021554 Baz1aO88379 1555 aa19.81■□□□□ 0.76
Actn1-201ENSMUST00000021554 NacadQ5SWP3 1504 aa19.79■□□□□ 0.76
Actn1-201ENSMUST00000021554 Zeb1Q64318 1117 aa19.76■□□□□ 0.75
Actn1-201ENSMUST00000021554 Myt1lP97500 1187 aa19.76■□□□□ 0.75
Actn1-201ENSMUST00000021554 Chic1Q8CBW7 227 aa19.74■□□□□ 0.75
Actn1-201ENSMUST00000021554 Npm2Q80W85 207 aa19.62■□□□□ 0.73
Actn1-201ENSMUST00000021554 UbtfP25976 765 aaKnown RBP19.56■□□□□ 0.72
Actn1-201ENSMUST00000021554 Pcgf6Q99NA9 353 aa19.52■□□□□ 0.72
Actn1-201ENSMUST00000021554 Cep164Q5DU05 1446 aa19.47■□□□□ 0.71
Actn1-201ENSMUST00000021554 Brd4Q9ESU6 1400 aaKnown RBP19.42■□□□□ 0.7
Actn1-201ENSMUST00000021554 Il27Q8K3I6 234 aa19.4■□□□□ 0.7
Actn1-201ENSMUST00000021554 Wdr66E9Q743 1299 aa19.39■□□□□ 0.69
Actn1-201ENSMUST00000021554 Supt5hO55201 1082 aaKnown RBP19.35■□□□□ 0.69
Actn1-201ENSMUST00000021554 Mier1Q5UAK0 511 aa19.31■□□□□ 0.68
Actn1-201ENSMUST00000021554 Rsf1E9PWW9 1441 aaKnown RBP19.29■□□□□ 0.68
Actn1-201ENSMUST00000021554 NefmP08553 848 aa19.24■□□□□ 0.67
Actn1-201ENSMUST00000021554 Sycp2Q9CUU3 1500 aa19.24■□□□□ 0.67
Actn1-201ENSMUST00000021554 Las1lA2BE28 776 aaKnown RBP19.23■□□□□ 0.67
Actn1-201ENSMUST00000021554 Cecr2E9Q2Z1 1453 aa19.2■□□□□ 0.66
Actn1-201ENSMUST00000021554 Smarca2Q6DIC0 1577 aa19.18■□□□□ 0.66
Actn1-201ENSMUST00000021554 Ap3b1Q9Z1T1 1105 aa19.15■□□□□ 0.66
Actn1-201ENSMUST00000021554 Ccdc88bQ4QRL3 1481 aa19.15■□□□□ 0.66
Actn1-201ENSMUST00000021554 Ppargc1bQ8VHJ7 1014 aa19.14■□□□□ 0.66
Actn1-201ENSMUST00000021554 Golga3P55937 1487 aa19.14■□□□□ 0.65
Actn1-201ENSMUST00000021554 Crybg2B7ZCC2 1516 aa19.1■□□□□ 0.65
Actn1-201ENSMUST00000021554 Plekhg3Q4VAC9 1341 aa19.04■□□□□ 0.64
Actn1-201ENSMUST00000021554 Synj1Q8CHC4 1574 aa18.88■□□□□ 0.61
Actn1-201ENSMUST00000021554 Ube2uB1AUC4 352 aa18.87■□□□□ 0.61
Actn1-201ENSMUST00000021554 CftrP26361 1476 aa18.85■□□□□ 0.61
Actn1-201ENSMUST00000021554 Sall2Q9QX96 1004 aa18.83■□□□□ 0.6
Actn1-201ENSMUST00000021554 Clip1Q922J3 1391 aa18.77■□□□□ 0.6
Actn1-201ENSMUST00000021554 Fam50aQ9WV03 339 aaKnown RBP18.74■□□□□ 0.59
Actn1-201ENSMUST00000021554 Lmod2Q3UHZ5 550 aa18.72■□□□□ 0.59
Actn1-201ENSMUST00000021554 Eid3Q3V124 375 aa18.7■□□□□ 0.58
Actn1-201ENSMUST00000021554 TonslQ6NZL6 1363 aa18.68■□□□□ 0.58
Actn1-201ENSMUST00000021554 Neurod1Q60867 357 aa18.67■□□□□ 0.58
Actn1-201ENSMUST00000021554 Npm1Q61937 292 aaKnown RBP18.64■□□□□ 0.57
Actn1-201ENSMUST00000021554 BicraF8VPZ9 1578 aa18.6■□□□□ 0.57
Actn1-201ENSMUST00000021554 Aebp2Q9Z248 504 aaKnown RBP18.59■□□□□ 0.57
Actn1-201ENSMUST00000021554 Cdk11bP24788 784 aaKnown RBP18.56■□□□□ 0.56
Actn1-201ENSMUST00000021554 Nop58Q6DFW4 536 aaKnown RBP18.56■□□□□ 0.56
Actn1-201ENSMUST00000021554 Kif15Q6P9L6 1387 aa18.54■□□□□ 0.56
Actn1-201ENSMUST00000021554 Ubl4bQ9CQ84 188 aa18.52■□□□□ 0.56
Actn1-201ENSMUST00000021554 Cep162Q6ZQ06 1403 aa18.52■□□□□ 0.56
Actn1-201ENSMUST00000021554 Fmn1Q05860 1466 aa18.51■□□□□ 0.55
Actn1-201ENSMUST00000021554 Smarca4Q3TKT4 1613 aaKnown RBP18.49■□□□□ 0.55
Actn1-201ENSMUST00000021554 Mapk8ip2Q9ERE9 830 aa18.48■□□□□ 0.55
Actn1-201ENSMUST00000021554 Rapgef2Q8CHG7 1496 aa18.46■□□□□ 0.55
Actn1-201ENSMUST00000021554 Cttnbp2B9EJA2 1648 aa18.44■□□□□ 0.54
Actn1-201ENSMUST00000021554 ClspnQ80YR7 1315 aa18.44■□□□□ 0.54
Actn1-201ENSMUST00000021554 NclP09405 707 aaKnown RBP18.43■□□□□ 0.54
Actn1-201ENSMUST00000021554 Setd5Q5XJV7 1441 aa18.42■□□□□ 0.54
Actn1-201ENSMUST00000021554 Cc2d2aQ8CFW7 1633 aa18.36■□□□□ 0.53
Actn1-201ENSMUST00000021554 Pds5bQ4VA53 1446 aaKnown RBP18.36■□□□□ 0.53
Actn1-201ENSMUST00000021554 Slc24a1Q91WD8 1130 aa18.35■□□□□ 0.53
Actn1-201ENSMUST00000021554 BlmO88700 1416 aa18.34■□□□□ 0.53
Actn1-201ENSMUST00000021554 Atad2bE9Q166 1460 aaKnown RBP18.32■□□□□ 0.52
Actn1-201ENSMUST00000021554 Iqgap2Q3UQ44 1575 aa18.3■□□□□ 0.52
Actn1-201ENSMUST00000021554 Eea1Q8BL66 1411 aa18.27■□□□□ 0.52
Actn1-201ENSMUST00000021554 Ercc6F8VPZ5 1481 aa18.24■□□□□ 0.51
Actn1-201ENSMUST00000021554 Csrnp3P59055 597 aa18.21■□□□□ 0.51
Actn1-201ENSMUST00000021554 Top2bQ64511 1612 aa18.2■□□□□ 0.5
Actn1-201ENSMUST00000021554 Chic2Q9D9G3 165 aa18.2■□□□□ 0.5
Actn1-201ENSMUST00000021554 Gm38655A0A286YDK6 273 aa18.18■□□□□ 0.5
Actn1-201ENSMUST00000021554 Ccdc18Q640L5 1455 aa18.16■□□□□ 0.5
Actn1-201ENSMUST00000021554 Top2aQ01320 1528 aaKnown RBP18.15■□□□□ 0.5
Actn1-201ENSMUST00000021554 Anks4bQ8K3X6 423 aa18.13■□□□□ 0.49
Actn1-201ENSMUST00000021554 PtprkP35822 1457 aa18.06■□□□□ 0.48
Actn1-201ENSMUST00000021554 Zbtb7cQ8VCZ7 619 aa18.05■□□□□ 0.48
Actn1-201ENSMUST00000021554 Cux2P70298 1426 aa18.04■□□□□ 0.48
Actn1-201ENSMUST00000021554 Fkbp15Q6P9Q6 1216 aaKnown RBP18.02■□□□□ 0.47
Actn1-201ENSMUST00000021554 Baz1bQ9Z277 1479 aa18.02■□□□□ 0.47
Actn1-201ENSMUST00000021554 CenpbP27790 599 aa18.01■□□□□ 0.47
Actn1-201ENSMUST00000021554 Frmpd1A2AKB4 1549 aa17.99■□□□□ 0.47
Actn1-201ENSMUST00000021554 Arhgap35Q91YM2 1499 aa17.97■□□□□ 0.47
Actn1-201ENSMUST00000021554 Hspa5P20029 655 aaKnown RBP17.94■□□□□ 0.46
Actn1-201ENSMUST00000021554 Stra8P70278 393 aa17.93■□□□□ 0.46
Actn1-201ENSMUST00000021554 Aebp1Q640N1 1128 aa17.92■□□□□ 0.46
Actn1-201ENSMUST00000021554 Eif5bQ05D44 1216 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms