RNA–Protein interactions for RNA: ENSMUST00000021288.9

Usp43-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp43, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-201ENSMUST00000021288 Rhox8Q6VSS7 320 aa27.87■■■□□ 2.05
Usp43-201ENSMUST00000021288 NischQ80TM9 1593 aa25.5■■□□□ 1.67
Usp43-201ENSMUST00000021288 Ehmt2Q9Z148 1263 aaKnown RBP25.47■■□□□ 1.67
Usp43-201ENSMUST00000021288 Ccdc136Q3TVA9 1136 aa25.22■■□□□ 1.63
Usp43-201ENSMUST00000021288 Rpgrip1Q9EPQ2 1331 aa24.64■■□□□ 1.54
Usp43-201ENSMUST00000021288 Cngb1E1AZ71 1325 aa24.49■■□□□ 1.51
Usp43-201ENSMUST00000021288 Gab3Q8BSM5 595 aa24.45■■□□□ 1.51
Usp43-201ENSMUST00000021288 Trim41Q5NCC3 630 aa24.35■■□□□ 1.49
Usp43-201ENSMUST00000021288 Esf1Q3V1V3 845 aaKnown RBP24.33■■□□□ 1.49
Usp43-201ENSMUST00000021288 Zeb1Q64318 1117 aa24.01■■□□□ 1.43
Usp43-201ENSMUST00000021288 Abcc9P70170 1546 aa23.95■■□□□ 1.42
Usp43-201ENSMUST00000021288 Wdr66E9Q743 1299 aa23.81■■□□□ 1.4
Usp43-201ENSMUST00000021288 Myt1lP97500 1187 aa23.8■■□□□ 1.4
Usp43-201ENSMUST00000021288 Acin1Q9JIX8 1338 aaKnown RBP23.74■■□□□ 1.39
Usp43-201ENSMUST00000021288 Npm2Q80W85 207 aa23.68■■□□□ 1.38
Usp43-201ENSMUST00000021288 Las1lA2BE28 776 aaKnown RBP23.54■■□□□ 1.36
Usp43-201ENSMUST00000021288 Ccdc180J3QNE4 1664 aa23.5■■□□□ 1.35
Usp43-201ENSMUST00000021288 HrcG5E8J6 738 aa23.49■■□□□ 1.35
Usp43-201ENSMUST00000021288 Abcc8B2RUS7 1588 aa23.49■■□□□ 1.35
Usp43-201ENSMUST00000021288 UbtfP25976 765 aaKnown RBP23.45■■□□□ 1.35
Usp43-201ENSMUST00000021288 Zcchc6Q5BLK4 1491 aaKnown RBP23.37■■□□□ 1.33
Usp43-201ENSMUST00000021288 Gm35339A0A140LHH9 1649 aa23.36■■□□□ 1.33
Usp43-201ENSMUST00000021288 Ube2uB1AUC4 352 aa23.35■■□□□ 1.33
Usp43-201ENSMUST00000021288 Il27Q8K3I6 234 aa23.15■■□□□ 1.3
Usp43-201ENSMUST00000021288 Rtl1Q7M732 1744 aa23.12■■□□□ 1.29
Usp43-201ENSMUST00000021288 Pcgf6Q99NA9 353 aa23.11■■□□□ 1.29
Usp43-201ENSMUST00000021288 NefmP08553 848 aa23.04■■□□□ 1.28
Usp43-201ENSMUST00000021288 Ppargc1bQ8VHJ7 1014 aa23■■□□□ 1.27
Usp43-201ENSMUST00000021288 Supt5hO55201 1082 aaKnown RBP22.86■■□□□ 1.25
Usp43-201ENSMUST00000021288 Ap3b1Q9Z1T1 1105 aa22.84■■□□□ 1.25
Usp43-201ENSMUST00000021288 Mier1Q5UAK0 511 aa22.67■■□□□ 1.22
Usp43-201ENSMUST00000021288 Chic1Q8CBW7 227 aa22.63■■□□□ 1.21
Usp43-201ENSMUST00000021288 Slc24a1Q91WD8 1130 aa22.63■■□□□ 1.21
Usp43-201ENSMUST00000021288 Fam50aQ9WV03 339 aaKnown RBP22.58■■□□□ 1.2
Usp43-201ENSMUST00000021288 Cdk11bP24788 784 aaKnown RBP22.47■■□□□ 1.19
Usp43-201ENSMUST00000021288 Plekhg3Q4VAC9 1341 aa22.46■■□□□ 1.19
Usp43-201ENSMUST00000021288 Dcaf1Q80TR8 1506 aa22.41■■□□□ 1.18
Usp43-201ENSMUST00000021288 Rb1cc1Q9ESK9 1588 aa22.38■■□□□ 1.17
Usp43-201ENSMUST00000021288 Nop58Q6DFW4 536 aaKnown RBP22.37■■□□□ 1.17
Usp43-201ENSMUST00000021288 Neurod1Q60867 357 aa22.35■■□□□ 1.17
Usp43-201ENSMUST00000021288 Lmod2Q3UHZ5 550 aa22.29■■□□□ 1.16
Usp43-201ENSMUST00000021288 NclP09405 707 aaKnown RBP22.28■■□□□ 1.16
Usp43-201ENSMUST00000021288 CenpbP27790 599 aa22.27■■□□□ 1.16
Usp43-201ENSMUST00000021288 TonslQ6NZL6 1363 aa22.27■■□□□ 1.16
Usp43-201ENSMUST00000021288 Cep164Q5DU05 1446 aa22.2■■□□□ 1.14
Usp43-201ENSMUST00000021288 Eid3Q3V124 375 aa22.19■■□□□ 1.14
Usp43-201ENSMUST00000021288 Brd4Q9ESU6 1400 aaKnown RBP22.13■■□□□ 1.13
Usp43-201ENSMUST00000021288 Sall2Q9QX96 1004 aa22.13■■□□□ 1.13
Usp43-201ENSMUST00000021288 Mapk8ip2Q9ERE9 830 aa22.12■■□□□ 1.13
Usp43-201ENSMUST00000021288 Stra8P70278 393 aa22.04■■□□□ 1.12
Usp43-201ENSMUST00000021288 Npm1Q61937 292 aaKnown RBP22.02■■□□□ 1.12
Usp43-201ENSMUST00000021288 Pelp1Q9DBD5 1123 aaKnown RBP22■■□□□ 1.11
Usp43-201ENSMUST00000021288 Eif5bQ05D44 1216 aaKnown RBP21.95■■□□□ 1.1
Usp43-201ENSMUST00000021288 Clip1Q922J3 1391 aa21.92■■□□□ 1.1
Usp43-201ENSMUST00000021288 Zbtb7cQ8VCZ7 619 aa21.9■■□□□ 1.1
Usp43-201ENSMUST00000021288 ClspnQ80YR7 1315 aa21.88■■□□□ 1.09
Usp43-201ENSMUST00000021288 NacadQ5SWP3 1504 aa21.87■■□□□ 1.09
Usp43-201ENSMUST00000021288 Baz1aO88379 1555 aa21.85■■□□□ 1.09
Usp43-201ENSMUST00000021288 Gm38655A0A286YDK6 273 aa21.84■■□□□ 1.09
Usp43-201ENSMUST00000021288 NrdcQ8BHG1 1161 aa21.81■■□□□ 1.08
Usp43-201ENSMUST00000021288 Rsf1E9PWW9 1441 aaKnown RBP21.74■■□□□ 1.07
Usp43-201ENSMUST00000021288 Kdm5dQ62240 1548 aa21.73■■□□□ 1.07
Usp43-201ENSMUST00000021288 Zbtb4Q5F293 982 aa21.68■■□□□ 1.06
Usp43-201ENSMUST00000021288 Tnnt3Q9QZ47 272 aa21.67■■□□□ 1.06
Usp43-201ENSMUST00000021288 Csrnp3P59055 597 aa21.65■■□□□ 1.06
Usp43-201ENSMUST00000021288 Aebp2Q9Z248 504 aaKnown RBP21.65■■□□□ 1.06
Usp43-201ENSMUST00000021288 Golga3P55937 1487 aa21.62■■□□□ 1.05
Usp43-201ENSMUST00000021288 Os9Q8K2C7 672 aa21.6■■□□□ 1.05
Usp43-201ENSMUST00000021288 Ubl4bQ9CQ84 188 aa21.58■■□□□ 1.05
Usp43-201ENSMUST00000021288 Fkbp15Q6P9Q6 1216 aaKnown RBP21.58■■□□□ 1.05
Usp43-201ENSMUST00000021288 Ttbk1Q6PCN3 1308 aa21.58■■□□□ 1.04
Usp43-201ENSMUST00000021288 Ifnlr1Q8CGK5 535 aa21.55■■□□□ 1.04
Usp43-201ENSMUST00000021288 Hnrnpul2Q00PI9 745 aaKnown RBP21.54■■□□□ 1.04
Usp43-201ENSMUST00000021288 Chic2Q9D9G3 165 aa21.54■■□□□ 1.04
Usp43-201ENSMUST00000021288 Ccdc88bQ4QRL3 1481 aa21.49■■□□□ 1.03
Usp43-201ENSMUST00000021288 Anp32bQ9EST5 272 aaKnown RBP21.48■■□□□ 1.03
Usp43-201ENSMUST00000021288 Anks4bQ8K3X6 423 aa21.46■■□□□ 1.03
Usp43-201ENSMUST00000021288 BlmO88700 1416 aa21.46■■□□□ 1.03
Usp43-201ENSMUST00000021288 Setd5Q5XJV7 1441 aa21.41■■□□□ 1.02
Usp43-201ENSMUST00000021288 Amer1Q7TS75 1132 aa21.35■■□□□ 1.01
Usp43-201ENSMUST00000021288 Prdm10Q3UTQ7 1184 aa21.33■■□□□ 1
Usp43-201ENSMUST00000021288 Kif15Q6P9L6 1387 aa21.32■■□□□ 1
Usp43-201ENSMUST00000021288 NeflP08551 543 aa21.3■■□□□ 1
Usp43-201ENSMUST00000021288 Erich6D3Z6S9 713 aa21.27■■□□□ 1
Usp43-201ENSMUST00000021288 Cecr2E9Q2Z1 1453 aa21.19■□□□□ 0.98
Usp43-201ENSMUST00000021288 ScribQ80U72 1612 aa21.15■□□□□ 0.98
Usp43-201ENSMUST00000021288 Ccer2J3QPU5 274 aa21.12■□□□□ 0.97
Usp43-201ENSMUST00000021288 Mrs2Q5NCE8 434 aa21.11■□□□□ 0.97
Usp43-201ENSMUST00000021288 Eea1Q8BL66 1411 aa21.1■□□□□ 0.97
Usp43-201ENSMUST00000021288 1700123L14RikQ3V2K7 440 aa21.09■□□□□ 0.97
Usp43-201ENSMUST00000021288 Anp32aO35381 247 aa21.08■□□□□ 0.96
Usp43-201ENSMUST00000021288 4933416C03RikQ3V063 378 aa21.08■□□□□ 0.96
Usp43-201ENSMUST00000021288 Sycp2Q9CUU3 1500 aa21.03■□□□□ 0.96
Usp43-201ENSMUST00000021288 Aplp2Q06335 707 aa21.02■□□□□ 0.96
Usp43-201ENSMUST00000021288 Cep162Q6ZQ06 1403 aa21.01■□□□□ 0.95
Usp43-201ENSMUST00000021288 Calr4Q3TQS0 420 aa21■□□□□ 0.95
Usp43-201ENSMUST00000021288 Rgl3Q3UYI5 709 aa20.98■□□□□ 0.95
Usp43-201ENSMUST00000021288 Myt1Q8CFC2 1127 aa20.98■□□□□ 0.95
Usp43-201ENSMUST00000021288 Ppp4r2Q0VGB7 417 aa20.95■□□□□ 0.94
Usp43-201ENSMUST00000021288 Hspa5P20029 655 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 175.3 ms