RNA–Protein interactions for RNA: ENSMUST00000020753.3

Clhc1-201, Transcript of Clathrin heavy chain linker domain-containing protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clhc1, Length 2,200 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1-201ENSMUST00000020753 Chic1Q8CBW7 227 aa14.63□□□□□ -0.07
Clhc1-201ENSMUST00000020753 Mapk8ip2Q9ERE9 830 aa14.16□□□□□ -0.14
Clhc1-201ENSMUST00000020753 Phf23Q8BSN5 401 aa13.24□□□□□ -0.29
Clhc1-201ENSMUST00000020753 Plppr3Q7TPB0 716 aa13.05□□□□□ -0.32
Clhc1-201ENSMUST00000020753 Gab3Q8BSM5 595 aa12.68□□□□□ -0.38
Clhc1-201ENSMUST00000020753 Kcna4Q61423 654 aa12.5□□□□□ -0.41
Clhc1-201ENSMUST00000020753 Senp3Q9EP97 568 aaKnown RBP12.23□□□□□ -0.45
Clhc1-201ENSMUST00000020753 Ppargc1bQ8VHJ7 1014 aa11.56□□□□□ -0.56
Clhc1-201ENSMUST00000020753 Ube2uB1AUC4 352 aa11.12□□□□□ -0.63
Clhc1-201ENSMUST00000020753 Dmrt2Q8BG36 561 aa11.1□□□□□ -0.63
Clhc1-201ENSMUST00000020753 Slc4a1apE9PX68 744 aa10.78□□□□□ -0.68
Clhc1-201ENSMUST00000020753 Trap1aP19473 224 aa10.73□□□□□ -0.69
Clhc1-201ENSMUST00000020753 Hoxd11P23813 323 aa10.65□□□□□ -0.71
Clhc1-201ENSMUST00000020753 Atf5O70191 283 aa10.53□□□□□ -0.72
Clhc1-201ENSMUST00000020753 Fam71e1A1L3C1 212 aa10.46□□□□□ -0.74
Clhc1-201ENSMUST00000020753 Fam163aQ8CAA5 168 aa10.46□□□□□ -0.74
Clhc1-201ENSMUST00000020753 Ehmt2Q9Z148 1263 aaKnown RBP10.38□□□□□ -0.75
Clhc1-201ENSMUST00000020753 1700123L14RikQ3V2K7 440 aa10.23□□□□□ -0.77
Clhc1-201ENSMUST00000020753 Ppp4r2Q0VGB7 417 aa10.19□□□□□ -0.78
Clhc1-201ENSMUST00000020753 Znf219Q6IQX8 726 aa10.19□□□□□ -0.78
Clhc1-201ENSMUST00000020753 Chrna2Q91X60 512 aa10.14□□□□□ -0.79
Clhc1-201ENSMUST00000020753 Hs6st3Q9QYK4 470 aa10.07□□□□□ -0.8
Clhc1-201ENSMUST00000020753 Pde4cQ3UEI1 686 aa10.05□□□□□ -0.8
Clhc1-201ENSMUST00000020753 Rsph4aQ8BYM7 716 aa10.05□□□□□ -0.8
Clhc1-201ENSMUST00000020753 Nlrp6Q91WS2 869 aa10.03□□□□□ -0.8
Clhc1-201ENSMUST00000020753 AcrbpQ3V140 540 aa10.02□□□□□ -0.81
Clhc1-201ENSMUST00000020753 Cdca7Q9D0M2 382 aa9.94□□□□□ -0.82
Clhc1-201ENSMUST00000020753 Rimbp2Q80U40 1072 aa9.92□□□□□ -0.82
Clhc1-201ENSMUST00000020753 Tshz2Q68FE9 1030 aa9.91□□□□□ -0.82
Clhc1-201ENSMUST00000020753 Dnajc5bQ9CQ94 199 aa9.89□□□□□ -0.83
Clhc1-201ENSMUST00000020753 Bach1P97302 739 aa9.76□□□□□ -0.85
Clhc1-201ENSMUST00000020753 Rtn4Q99P72 1162 aaKnown RBP9.74□□□□□ -0.85
Clhc1-201ENSMUST00000020753 Prdm10Q3UTQ7 1184 aa9.67□□□□□ -0.86
Clhc1-201ENSMUST00000020753 ArsiQ32KI9 573 aa9.66□□□□□ -0.86
Clhc1-201ENSMUST00000020753 Prm3Q62100 101 aa9.66□□□□□ -0.86
Clhc1-201ENSMUST00000020753 Akt1s1Q9D1F4 257 aa9.63□□□□□ -0.87
Clhc1-201ENSMUST00000020753 Ecm2Q5FW85 670 aa9.62□□□□□ -0.87
Clhc1-201ENSMUST00000020753 Riok3Q9DBU3 519 aaKnown RBP9.54□□□□□ -0.88
Clhc1-201ENSMUST00000020753 Styxl1Q9DAR2 321 aa9.51□□□□□ -0.89
Clhc1-201ENSMUST00000020753 Ms4a5Q810P8 197 aa9.5□□□□□ -0.89
Clhc1-201ENSMUST00000020753 WdpcpQ8C456 722 aa9.5□□□□□ -0.89
Clhc1-201ENSMUST00000020753 C1qtnf12Q8R2Z0 308 aa9.48□□□□□ -0.89
Clhc1-201ENSMUST00000020753 MyclP10166 368 aa9.48□□□□□ -0.89
Clhc1-201ENSMUST00000020753 Slc34a2Q9DBP0 697 aa9.47□□□□□ -0.89
Clhc1-201ENSMUST00000020753 Npm2Q80W85 207 aa9.4□□□□□ -0.9
Clhc1-201ENSMUST00000020753 Sox12Q04890 314 aa9.32□□□□□ -0.92
Clhc1-201ENSMUST00000020753 Prdm16A2A935 1275 aa9.25□□□□□ -0.93
Clhc1-201ENSMUST00000020753 Arid3aQ62431 601 aa9.18□□□□□ -0.94
Clhc1-201ENSMUST00000020753 Tcf3P15806 651 aa9.13□□□□□ -0.95
Clhc1-201ENSMUST00000020753 Trim41Q5NCC3 630 aa9.11□□□□□ -0.95
Clhc1-201ENSMUST00000020753 G430095P16RikE9Q913 147 aa9.08□□□□□ -0.96
Clhc1-201ENSMUST00000020753 Taok2Q6ZQ29 1240 aa9.08□□□□□ -0.96
Clhc1-201ENSMUST00000020753 MpndQ3TV65 487 aa9□□□□□ -0.97
Clhc1-201ENSMUST00000020753 Ppp6r1Q7TSI3 856 aa8.97□□□□□ -0.97
Clhc1-201ENSMUST00000020753 Ppp1r37Q8BKR5 712 aa8.96□□□□□ -0.98
Clhc1-201ENSMUST00000020753 CatipB9EKE5 520 aa8.91□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Zbtb7aO88939 569 aaKnown RBP8.9□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Skap1Q3UUV5 355 aa8.9□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Ifnlr1Q8CGK5 535 aa8.9□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Npm3Q9CPP0 175 aaKnown RBP8.89□□□□□ -0.99
Clhc1-201ENSMUST00000020753 Fbln2P37889 1221 aa8.87□□□□□ -0.99
Clhc1-201ENSMUST00000020753 Egfem1Q8C088 590 aa8.86□□□□□ -0.99
Clhc1-201ENSMUST00000020753 Abcb7Q61102 752 aaKnown RBP8.83□□□□□ -1
Clhc1-201ENSMUST00000020753 Grwd1Q810D6 446 aaKnown RBP8.8□□□□□ -1
Clhc1-201ENSMUST00000020753 Zbtb22Q9Z0G7 638 aa8.79□□□□□ -1
Clhc1-201ENSMUST00000020753 Esf1Q3V1V3 845 aaKnown RBP8.75□□□□□ -1.01
Clhc1-201ENSMUST00000020753 Gtpbp6Q3U6U5 514 aa8.7□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Znf704Q9ERQ3 566 aa8.7□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Zbtb12Q9Z150 459 aa8.69□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Mkrn3Q60764 544 aa8.66□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Slc4a2P13808 1237 aaKnown RBP8.65□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Spock2Q9ER58 423 aa8.64□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Rnf216P58283 853 aa8.64□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Slc4a5E9Q3M5 1116 aa8.63□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Nkx1-1G3UXB3 402 aa8.61□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Jarid2Q62315 1234 aa8.59□□□□□ -1.03
Clhc1-201ENSMUST00000020753 TimelessQ9R1X4 1197 aa8.58□□□□□ -1.04
Clhc1-201ENSMUST00000020753 Skida1Q80YR3 822 aa8.56□□□□□ -1.04
Clhc1-201ENSMUST00000020753 Ferd3lQ923Z4 168 aa8.56□□□□□ -1.04
Clhc1-201ENSMUST00000020753 Lrrc43Q3V0L5 667 aa8.54□□□□□ -1.04
Clhc1-201ENSMUST00000020753 MycnP03966 462 aaKnown RBP8.52□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Fam117bQ3U3E2 584 aa8.52□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Noa1Q9JJG9 693 aaKnown RBP8.52□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Repin1Q5U4E2 545 aa8.5□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Pde4dQ01063 747 aa8.5□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Rgl2Q61193 778 aa8.48□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Zeb1Q64318 1117 aa8.46□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Zbtb38Q3LR78 1197 aa8.45□□□□□ -1.06
Clhc1-201ENSMUST00000020753 Hdac5Q9Z2V6 1113 aa8.4□□□□□ -1.06
Clhc1-201ENSMUST00000020753 Stag3O70576 1240 aa8.38□□□□□ -1.07
Clhc1-201ENSMUST00000020753 Stk3Q9JI10 497 aa8.37□□□□□ -1.07
Clhc1-201ENSMUST00000020753 UncxO08934 530 aa8.36□□□□□ -1.07
Clhc1-201ENSMUST00000020753 Vsig10D3YX43 558 aa8.35□□□□□ -1.07
Clhc1-201ENSMUST00000020753 Slc24a1Q91WD8 1130 aa8.33□□□□□ -1.08
Clhc1-201ENSMUST00000020753 GapdhsQ64467 440 aa8.32□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Sra1Q80VJ2 232 aa8.31□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Spryd3E9Q9B3 442 aa8.3□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Ubap1lG3UW59 384 aa8.3□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Map4k4P97820 1233 aaKnown RBP8.29□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Tmem132aQ922P8 1018 aa8.27□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 114.9 ms