RNA–Protein interactions for RNA: ENSMUST00000020234.13

Timp3-201, Transcript of Metalloproteinase inhibitor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Timp3, Length 4,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3-201ENSMUST00000020234 Rhox8Q6VSS7 320 aa23.83■■□□□ 1.4
Timp3-201ENSMUST00000020234 NischQ80TM9 1593 aa22.03■■□□□ 1.12
Timp3-201ENSMUST00000020234 Rpgrip1Q9EPQ2 1331 aa21.8■■□□□ 1.08
Timp3-201ENSMUST00000020234 Ehmt2Q9Z148 1263 aaKnown RBP21.77■■□□□ 1.08
Timp3-201ENSMUST00000020234 Ccdc136Q3TVA9 1136 aa21.49■■□□□ 1.03
Timp3-201ENSMUST00000020234 Cngb1E1AZ71 1325 aa20.96■□□□□ 0.95
Timp3-201ENSMUST00000020234 Trim41Q5NCC3 630 aa20.92■□□□□ 0.94
Timp3-201ENSMUST00000020234 Gab3Q8BSM5 595 aa20.87■□□□□ 0.93
Timp3-201ENSMUST00000020234 Esf1Q3V1V3 845 aaKnown RBP20.78■□□□□ 0.92
Timp3-201ENSMUST00000020234 Abcc9P70170 1546 aa20.77■□□□□ 0.92
Timp3-201ENSMUST00000020234 Acin1Q9JIX8 1338 aaKnown RBP20.76■□□□□ 0.91
Timp3-201ENSMUST00000020234 Zeb1Q64318 1117 aa20.7■□□□□ 0.9
Timp3-201ENSMUST00000020234 Ccdc180J3QNE4 1664 aa20.68■□□□□ 0.9
Timp3-201ENSMUST00000020234 Wdr66E9Q743 1299 aa20.58■□□□□ 0.89
Timp3-201ENSMUST00000020234 Rtl1Q7M732 1744 aa20.49■□□□□ 0.87
Timp3-201ENSMUST00000020234 Las1lA2BE28 776 aaKnown RBP20.48■□□□□ 0.87
Timp3-201ENSMUST00000020234 HrcG5E8J6 738 aa20.45■□□□□ 0.86
Timp3-201ENSMUST00000020234 Myt1lP97500 1187 aa20.32■□□□□ 0.84
Timp3-201ENSMUST00000020234 Npm2Q80W85 207 aa20.29■□□□□ 0.84
Timp3-201ENSMUST00000020234 Abcc8B2RUS7 1588 aa20.29■□□□□ 0.84
Timp3-201ENSMUST00000020234 Pcgf6Q99NA9 353 aa20.13■□□□□ 0.81
Timp3-201ENSMUST00000020234 UbtfP25976 765 aaKnown RBP20.12■□□□□ 0.81
Timp3-201ENSMUST00000020234 NefmP08553 848 aa20.12■□□□□ 0.81
Timp3-201ENSMUST00000020234 Zcchc6Q5BLK4 1491 aaKnown RBP20.06■□□□□ 0.8
Timp3-201ENSMUST00000020234 Ube2uB1AUC4 352 aa20■□□□□ 0.79
Timp3-201ENSMUST00000020234 Gm35339A0A140LHH9 1649 aa19.81■□□□□ 0.76
Timp3-201ENSMUST00000020234 Supt5hO55201 1082 aaKnown RBP19.81■□□□□ 0.76
Timp3-201ENSMUST00000020234 Il27Q8K3I6 234 aa19.64■□□□□ 0.73
Timp3-201ENSMUST00000020234 Ppargc1bQ8VHJ7 1014 aa19.6■□□□□ 0.73
Timp3-201ENSMUST00000020234 CenpbP27790 599 aa19.6■□□□□ 0.73
Timp3-201ENSMUST00000020234 Mier1Q5UAK0 511 aa19.58■□□□□ 0.73
Timp3-201ENSMUST00000020234 Cdk11bP24788 784 aaKnown RBP19.58■□□□□ 0.72
Timp3-201ENSMUST00000020234 Ap3b1Q9Z1T1 1105 aa19.48■□□□□ 0.71
Timp3-201ENSMUST00000020234 Nop58Q6DFW4 536 aaKnown RBP19.45■□□□□ 0.7
Timp3-201ENSMUST00000020234 Pelp1Q9DBD5 1123 aaKnown RBP19.45■□□□□ 0.7
Timp3-201ENSMUST00000020234 Dcaf1Q80TR8 1506 aa19.44■□□□□ 0.7
Timp3-201ENSMUST00000020234 Slc24a1Q91WD8 1130 aa19.42■□□□□ 0.7
Timp3-201ENSMUST00000020234 Rb1cc1Q9ESK9 1588 aa19.37■□□□□ 0.69
Timp3-201ENSMUST00000020234 Chic1Q8CBW7 227 aa19.36■□□□□ 0.69
Timp3-201ENSMUST00000020234 Fam50aQ9WV03 339 aaKnown RBP19.34■□□□□ 0.69
Timp3-201ENSMUST00000020234 Stra8P70278 393 aa19.33■□□□□ 0.68
Timp3-201ENSMUST00000020234 TonslQ6NZL6 1363 aa19.32■□□□□ 0.68
Timp3-201ENSMUST00000020234 Cep164Q5DU05 1446 aa19.32■□□□□ 0.68
Timp3-201ENSMUST00000020234 Plekhg3Q4VAC9 1341 aa19.22■□□□□ 0.67
Timp3-201ENSMUST00000020234 NclP09405 707 aaKnown RBP19.22■□□□□ 0.67
Timp3-201ENSMUST00000020234 Neurod1Q60867 357 aa19.17■□□□□ 0.66
Timp3-201ENSMUST00000020234 Brd4Q9ESU6 1400 aaKnown RBP19.16■□□□□ 0.66
Timp3-201ENSMUST00000020234 Sall2Q9QX96 1004 aa19.14■□□□□ 0.65
Timp3-201ENSMUST00000020234 ClspnQ80YR7 1315 aa19.08■□□□□ 0.64
Timp3-201ENSMUST00000020234 Tnnt3Q9QZ47 272 aa19.05■□□□□ 0.64
Timp3-201ENSMUST00000020234 Lmod2Q3UHZ5 550 aa18.99■□□□□ 0.63
Timp3-201ENSMUST00000020234 Baz1aO88379 1555 aa18.96■□□□□ 0.63
Timp3-201ENSMUST00000020234 Eid3Q3V124 375 aa18.96■□□□□ 0.63
Timp3-201ENSMUST00000020234 Eif5bQ05D44 1216 aaKnown RBP18.92■□□□□ 0.62
Timp3-201ENSMUST00000020234 NrdcQ8BHG1 1161 aa18.91■□□□□ 0.62
Timp3-201ENSMUST00000020234 Clip1Q922J3 1391 aa18.9■□□□□ 0.62
Timp3-201ENSMUST00000020234 NacadQ5SWP3 1504 aa18.89■□□□□ 0.61
Timp3-201ENSMUST00000020234 Mapk8ip2Q9ERE9 830 aa18.87■□□□□ 0.61
Timp3-201ENSMUST00000020234 Csrnp3P59055 597 aa18.82■□□□□ 0.6
Timp3-201ENSMUST00000020234 Anks4bQ8K3X6 423 aa18.81■□□□□ 0.6
Timp3-201ENSMUST00000020234 Npm1Q61937 292 aaKnown RBP18.8■□□□□ 0.6
Timp3-201ENSMUST00000020234 Gm38655A0A286YDK6 273 aa18.8■□□□□ 0.6
Timp3-201ENSMUST00000020234 Myt1Q8CFC2 1127 aa18.8■□□□□ 0.6
Timp3-201ENSMUST00000020234 Rsf1E9PWW9 1441 aaKnown RBP18.72■□□□□ 0.59
Timp3-201ENSMUST00000020234 Kdm5dQ62240 1548 aa18.71■□□□□ 0.59
Timp3-201ENSMUST00000020234 Golga3P55937 1487 aa18.71■□□□□ 0.59
Timp3-201ENSMUST00000020234 Ttbk1Q6PCN3 1308 aa18.7■□□□□ 0.58
Timp3-201ENSMUST00000020234 Amer1Q7TS75 1132 aa18.67■□□□□ 0.58
Timp3-201ENSMUST00000020234 Anp32bQ9EST5 272 aaKnown RBP18.66■□□□□ 0.58
Timp3-201ENSMUST00000020234 Aebp2Q9Z248 504 aaKnown RBP18.65■□□□□ 0.58
Timp3-201ENSMUST00000020234 Zbtb7cQ8VCZ7 619 aa18.56■□□□□ 0.56
Timp3-201ENSMUST00000020234 NeflP08551 543 aa18.55■□□□□ 0.56
Timp3-201ENSMUST00000020234 Aplp2Q06335 707 aa18.51■□□□□ 0.55
Timp3-201ENSMUST00000020234 Os9Q8K2C7 672 aa18.51■□□□□ 0.55
Timp3-201ENSMUST00000020234 Anp32aO35381 247 aa18.49■□□□□ 0.55
Timp3-201ENSMUST00000020234 Ccdc88bQ4QRL3 1481 aa18.48■□□□□ 0.55
Timp3-201ENSMUST00000020234 BlmO88700 1416 aa18.46■□□□□ 0.55
Timp3-201ENSMUST00000020234 Setd5Q5XJV7 1441 aa18.43■□□□□ 0.54
Timp3-201ENSMUST00000020234 Zbtb4Q5F293 982 aa18.42■□□□□ 0.54
Timp3-201ENSMUST00000020234 4933416C03RikQ3V063 378 aa18.4■□□□□ 0.54
Timp3-201ENSMUST00000020234 1700123L14RikQ3V2K7 440 aa18.4■□□□□ 0.54
Timp3-201ENSMUST00000020234 Chic2Q9D9G3 165 aa18.4■□□□□ 0.54
Timp3-201ENSMUST00000020234 Ccer2J3QPU5 274 aa18.39■□□□□ 0.53
Timp3-201ENSMUST00000020234 Hnrnpul2Q00PI9 745 aaKnown RBP18.35■□□□□ 0.53
Timp3-201ENSMUST00000020234 Rtl5Q5DTT4 599 aa18.35■□□□□ 0.53
Timp3-201ENSMUST00000020234 Ubl4bQ9CQ84 188 aa18.34■□□□□ 0.53
Timp3-201ENSMUST00000020234 Calr4Q3TQS0 420 aa18.28■□□□□ 0.52
Timp3-201ENSMUST00000020234 Eea1Q8BL66 1411 aa18.25■□□□□ 0.51
Timp3-201ENSMUST00000020234 Kif15Q6P9L6 1387 aa18.25■□□□□ 0.51
Timp3-201ENSMUST00000020234 Fkbp15Q6P9Q6 1216 aaKnown RBP18.25■□□□□ 0.51
Timp3-201ENSMUST00000020234 Mrs2Q5NCE8 434 aa18.21■□□□□ 0.51
Timp3-201ENSMUST00000020234 Ppp4r2Q0VGB7 417 aa18.18■□□□□ 0.5
Timp3-201ENSMUST00000020234 ScribQ80U72 1612 aa18.17■□□□□ 0.5
Timp3-201ENSMUST00000020234 Ifnlr1Q8CGK5 535 aa18.17■□□□□ 0.5
Timp3-201ENSMUST00000020234 Cep162Q6ZQ06 1403 aa18.16■□□□□ 0.5
Timp3-201ENSMUST00000020234 Erich6D3Z6S9 713 aa18.16■□□□□ 0.5
Timp3-201ENSMUST00000020234 Cecr2E9Q2Z1 1453 aa18.14■□□□□ 0.49
Timp3-201ENSMUST00000020234 Smarca2Q6DIC0 1577 aa18.13■□□□□ 0.49
Timp3-201ENSMUST00000020234 Sycp2Q9CUU3 1500 aa18.13■□□□□ 0.49
Timp3-201ENSMUST00000020234 Prdm10Q3UTQ7 1184 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms