RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Rhox8Q6VSS7 320 aa18.44■□□□□ 0.54
Echdc1-201ENSMUST00000020034 NischQ80TM9 1593 aa18.17■□□□□ 0.5
Echdc1-201ENSMUST00000020034 Abcc9P70170 1546 aa17.39■□□□□ 0.38
Echdc1-201ENSMUST00000020034 Rpgrip1Q9EPQ2 1331 aa17.24■□□□□ 0.35
Echdc1-201ENSMUST00000020034 Ehmt2Q9Z148 1263 aaKnown RBP17.22■□□□□ 0.35
Echdc1-201ENSMUST00000020034 Abcc8B2RUS7 1588 aa16.99■□□□□ 0.31
Echdc1-201ENSMUST00000020034 Ccdc136Q3TVA9 1136 aa16.95■□□□□ 0.3
Echdc1-201ENSMUST00000020034 Ccdc180J3QNE4 1664 aa16.9■□□□□ 0.3
Echdc1-201ENSMUST00000020034 Gm35339A0A140LHH9 1649 aa16.9■□□□□ 0.3
Echdc1-201ENSMUST00000020034 Rtl1Q7M732 1744 aa16.83■□□□□ 0.28
Echdc1-201ENSMUST00000020034 Acin1Q9JIX8 1338 aaKnown RBP16.8■□□□□ 0.28
Echdc1-201ENSMUST00000020034 Trim41Q5NCC3 630 aa16.56■□□□□ 0.24
Echdc1-201ENSMUST00000020034 HrcG5E8J6 738 aa16.55■□□□□ 0.24
Echdc1-201ENSMUST00000020034 Pcgf6Q99NA9 353 aa16.42■□□□□ 0.22
Echdc1-201ENSMUST00000020034 Gab3Q8BSM5 595 aa16.29■□□□□ 0.2
Echdc1-201ENSMUST00000020034 Cngb1E1AZ71 1325 aa16.23■□□□□ 0.19
Echdc1-201ENSMUST00000020034 Zcchc6Q5BLK4 1491 aaKnown RBP16.23■□□□□ 0.19
Echdc1-201ENSMUST00000020034 Zeb1Q64318 1117 aa16.21■□□□□ 0.19
Echdc1-201ENSMUST00000020034 Supt5hO55201 1082 aaKnown RBP16.12■□□□□ 0.17
Echdc1-201ENSMUST00000020034 Dcaf1Q80TR8 1506 aa16.1■□□□□ 0.17
Echdc1-201ENSMUST00000020034 Esf1Q3V1V3 845 aaKnown RBP15.93■□□□□ 0.14
Echdc1-201ENSMUST00000020034 Rb1cc1Q9ESK9 1588 aa15.92■□□□□ 0.14
Echdc1-201ENSMUST00000020034 Wdr66E9Q743 1299 aa15.85■□□□□ 0.13
Echdc1-201ENSMUST00000020034 NefmP08553 848 aa15.85■□□□□ 0.13
Echdc1-201ENSMUST00000020034 Chic1Q8CBW7 227 aa15.79■□□□□ 0.12
Echdc1-201ENSMUST00000020034 Mier1Q5UAK0 511 aa15.77■□□□□ 0.11
Echdc1-201ENSMUST00000020034 Las1lA2BE28 776 aaKnown RBP15.76■□□□□ 0.11
Echdc1-201ENSMUST00000020034 UbtfP25976 765 aaKnown RBP15.76■□□□□ 0.11
Echdc1-201ENSMUST00000020034 Neurod1Q60867 357 aa15.76■□□□□ 0.11
Echdc1-201ENSMUST00000020034 Cep164Q5DU05 1446 aa15.75■□□□□ 0.11
Echdc1-201ENSMUST00000020034 Myt1lP97500 1187 aa15.68■□□□□ 0.1
Echdc1-201ENSMUST00000020034 Baz1aO88379 1555 aa15.66■□□□□ 0.1
Echdc1-201ENSMUST00000020034 Sall2Q9QX96 1004 aa15.61■□□□□ 0.09
Echdc1-201ENSMUST00000020034 Ppargc1bQ8VHJ7 1014 aa15.6■□□□□ 0.09
Echdc1-201ENSMUST00000020034 Kdm5dQ62240 1548 aa15.54■□□□□ 0.08
Echdc1-201ENSMUST00000020034 Npm2Q80W85 207 aa15.52■□□□□ 0.08
Echdc1-201ENSMUST00000020034 ScribQ80U72 1612 aa15.48■□□□□ 0.07
Echdc1-201ENSMUST00000020034 Rsf1E9PWW9 1441 aaKnown RBP15.48■□□□□ 0.07
Echdc1-201ENSMUST00000020034 NacadQ5SWP3 1504 aa15.45■□□□□ 0.06
Echdc1-201ENSMUST00000020034 Cdk11bP24788 784 aaKnown RBP15.43■□□□□ 0.06
Echdc1-201ENSMUST00000020034 Nop58Q6DFW4 536 aaKnown RBP15.39■□□□□ 0.05
Echdc1-201ENSMUST00000020034 Brd4Q9ESU6 1400 aaKnown RBP15.39■□□□□ 0.05
Echdc1-201ENSMUST00000020034 Csrnp3P59055 597 aa15.34■□□□□ 0.05
Echdc1-201ENSMUST00000020034 Ccdc88bQ4QRL3 1481 aa15.31■□□□□ 0.04
Echdc1-201ENSMUST00000020034 Aebp2Q9Z248 504 aaKnown RBP15.31■□□□□ 0.04
Echdc1-201ENSMUST00000020034 Anks4bQ8K3X6 423 aa15.3■□□□□ 0.04
Echdc1-201ENSMUST00000020034 Golga3P55937 1487 aa15.25■□□□□ 0.03
Echdc1-201ENSMUST00000020034 TonslQ6NZL6 1363 aa15.25■□□□□ 0.03
Echdc1-201ENSMUST00000020034 Plekhg3Q4VAC9 1341 aa15.24■□□□□ 0.03
Echdc1-201ENSMUST00000020034 ClspnQ80YR7 1315 aa15.23■□□□□ 0.03
Echdc1-201ENSMUST00000020034 CenpbP27790 599 aa15.22■□□□□ 0.03
Echdc1-201ENSMUST00000020034 1700123L14RikQ3V2K7 440 aa15.21■□□□□ 0.03
Echdc1-201ENSMUST00000020034 Smarca2Q6DIC0 1577 aa15.21■□□□□ 0.02
Echdc1-201ENSMUST00000020034 Ap3b1Q9Z1T1 1105 aa15.17■□□□□ 0.02
Echdc1-201ENSMUST00000020034 Gm38655A0A286YDK6 273 aa15.17■□□□□ 0.02
Echdc1-201ENSMUST00000020034 Il27Q8K3I6 234 aa15.14■□□□□ 0.01
Echdc1-201ENSMUST00000020034 Crybg2B7ZCC2 1516 aa15.13■□□□□ 0.01
Echdc1-201ENSMUST00000020034 Cecr2E9Q2Z1 1453 aa15.11■□□□□ 0.01
Echdc1-201ENSMUST00000020034 Eid3Q3V124 375 aa15.08■□□□□ 0.01
Echdc1-201ENSMUST00000020034 Clip1Q922J3 1391 aa15.04■□□□□ -0
Echdc1-201ENSMUST00000020034 Sycp2Q9CUU3 1500 aa15.02■□□□□ -0
Echdc1-201ENSMUST00000020034 Mapk8ip2Q9ERE9 830 aa15□□□□□ -0.01
Echdc1-201ENSMUST00000020034 Ube2uB1AUC4 352 aa14.99□□□□□ -0.01
Echdc1-201ENSMUST00000020034 Aplp2Q06335 707 aa14.97□□□□□ -0.01
Echdc1-201ENSMUST00000020034 Fam50aQ9WV03 339 aaKnown RBP14.96□□□□□ -0.01
Echdc1-201ENSMUST00000020034 Synj1Q8CHC4 1574 aa14.92□□□□□ -0.02
Echdc1-201ENSMUST00000020034 NclP09405 707 aaKnown RBP14.92□□□□□ -0.02
Echdc1-201ENSMUST00000020034 Slc24a1Q91WD8 1130 aa14.9□□□□□ -0.02
Echdc1-201ENSMUST00000020034 CftrP26361 1476 aa14.89□□□□□ -0.03
Echdc1-201ENSMUST00000020034 Tnnt3Q9QZ47 272 aa14.84□□□□□ -0.03
Echdc1-201ENSMUST00000020034 Cep162Q6ZQ06 1403 aa14.84□□□□□ -0.03
Echdc1-201ENSMUST00000020034 Lmod2Q3UHZ5 550 aa14.83□□□□□ -0.04
Echdc1-201ENSMUST00000020034 Myt1Q8CFC2 1127 aa14.82□□□□□ -0.04
Echdc1-201ENSMUST00000020034 Stra8P70278 393 aa14.79□□□□□ -0.04
Echdc1-201ENSMUST00000020034 Rapgef2Q8CHG7 1496 aa14.75□□□□□ -0.05
Echdc1-201ENSMUST00000020034 SafbD3YXK2 937 aaKnown RBP14.71□□□□□ -0.05
Echdc1-201ENSMUST00000020034 Hnrnpul2Q00PI9 745 aaKnown RBP14.71□□□□□ -0.05
Echdc1-201ENSMUST00000020034 Fmn1Q05860 1466 aa14.7□□□□□ -0.06
Echdc1-201ENSMUST00000020034 Setd5Q5XJV7 1441 aa14.68□□□□□ -0.06
Echdc1-201ENSMUST00000020034 BlmO88700 1416 aa14.64□□□□□ -0.07
Echdc1-201ENSMUST00000020034 Fam71e1A1L3C1 212 aa14.63□□□□□ -0.07
Echdc1-201ENSMUST00000020034 Eif5bQ05D44 1216 aaKnown RBP14.63□□□□□ -0.07
Echdc1-201ENSMUST00000020034 Eea1Q8BL66 1411 aa14.62□□□□□ -0.07
Echdc1-201ENSMUST00000020034 Pelp1Q9DBD5 1123 aaKnown RBP14.57□□□□□ -0.08
Echdc1-201ENSMUST00000020034 Anp32aO35381 247 aa14.55□□□□□ -0.08
Echdc1-201ENSMUST00000020034 Cc2d2aQ8CFW7 1633 aa14.54□□□□□ -0.08
Echdc1-201ENSMUST00000020034 Cttnbp2B9EJA2 1648 aa14.54□□□□□ -0.08
Echdc1-201ENSMUST00000020034 Npm1Q61937 292 aaKnown RBP14.51□□□□□ -0.09
Echdc1-201ENSMUST00000020034 Top2bQ64511 1612 aa14.5□□□□□ -0.09
Echdc1-201ENSMUST00000020034 Kif15Q6P9L6 1387 aa14.49□□□□□ -0.09
Echdc1-201ENSMUST00000020034 Hspa5P20029 655 aaKnown RBP14.49□□□□□ -0.09
Echdc1-201ENSMUST00000020034 Calr4Q3TQS0 420 aa14.49□□□□□ -0.09
Echdc1-201ENSMUST00000020034 BicraF8VPZ9 1578 aa14.48□□□□□ -0.09
Echdc1-201ENSMUST00000020034 Top2aQ01320 1528 aaKnown RBP14.48□□□□□ -0.09
Echdc1-201ENSMUST00000020034 Chic2Q9D9G3 165 aa14.47□□□□□ -0.09
Echdc1-201ENSMUST00000020034 Smarca4Q3TKT4 1613 aaKnown RBP14.46□□□□□ -0.09
Echdc1-201ENSMUST00000020034 NrdcQ8BHG1 1161 aa14.46□□□□□ -0.1
Echdc1-201ENSMUST00000020034 Ncapd3Q6ZQK0 1506 aa14.44□□□□□ -0.1
Echdc1-201ENSMUST00000020034 Ccer2J3QPU5 274 aa14.42□□□□□ -0.1
Echdc1-201ENSMUST00000020034 Sin3aQ60520 1274 aaKnown RBP14.4□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms