RNA–Protein interactions for RNA: ENSMUST00000019374.13

Lhx9-201, Transcript of LIM/homeobox protein Lhx9, mousemouse

TSL 1 (best) BASIC

Gene Lhx9, Length 4,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9-201ENSMUST00000019374 Rhox8Q6VSS7 320 aa17.79■□□□□ 0.44
Lhx9-201ENSMUST00000019374 Rpgrip1Q9EPQ2 1331 aa17.23■□□□□ 0.35
Lhx9-201ENSMUST00000019374 NischQ80TM9 1593 aa16.88■□□□□ 0.29
Lhx9-201ENSMUST00000019374 Ehmt2Q9Z148 1263 aaKnown RBP16.78■□□□□ 0.28
Lhx9-201ENSMUST00000019374 Acin1Q9JIX8 1338 aaKnown RBP16.47■□□□□ 0.23
Lhx9-201ENSMUST00000019374 Ccdc180J3QNE4 1664 aa16.24■□□□□ 0.19
Lhx9-201ENSMUST00000019374 Ccdc136Q3TVA9 1136 aa16.18■□□□□ 0.18
Lhx9-201ENSMUST00000019374 Pcgf6Q99NA9 353 aa16.14■□□□□ 0.17
Lhx9-201ENSMUST00000019374 Rtl1Q7M732 1744 aa16.12■□□□□ 0.17
Lhx9-201ENSMUST00000019374 Abcc9P70170 1546 aa16.07■□□□□ 0.16
Lhx9-201ENSMUST00000019374 Las1lA2BE28 776 aaKnown RBP16.04■□□□□ 0.16
Lhx9-201ENSMUST00000019374 Zeb1Q64318 1117 aa15.97■□□□□ 0.15
Lhx9-201ENSMUST00000019374 Trim41Q5NCC3 630 aa15.93■□□□□ 0.14
Lhx9-201ENSMUST00000019374 HrcG5E8J6 738 aa15.91■□□□□ 0.14
Lhx9-201ENSMUST00000019374 Supt5hO55201 1082 aaKnown RBP15.77■□□□□ 0.11
Lhx9-201ENSMUST00000019374 Wdr66E9Q743 1299 aa15.71■□□□□ 0.11
Lhx9-201ENSMUST00000019374 Gab3Q8BSM5 595 aa15.71■□□□□ 0.11
Lhx9-201ENSMUST00000019374 Abcc8B2RUS7 1588 aa15.62■□□□□ 0.09
Lhx9-201ENSMUST00000019374 Cngb1E1AZ71 1325 aa15.62■□□□□ 0.09
Lhx9-201ENSMUST00000019374 NefmP08553 848 aa15.59■□□□□ 0.09
Lhx9-201ENSMUST00000019374 Dcaf1Q80TR8 1506 aa15.49■□□□□ 0.07
Lhx9-201ENSMUST00000019374 Neurod1Q60867 357 aa15.47■□□□□ 0.07
Lhx9-201ENSMUST00000019374 CenpbP27790 599 aa15.4■□□□□ 0.06
Lhx9-201ENSMUST00000019374 Gm35339A0A140LHH9 1649 aa15.36■□□□□ 0.05
Lhx9-201ENSMUST00000019374 Esf1Q3V1V3 845 aaKnown RBP15.3■□□□□ 0.04
Lhx9-201ENSMUST00000019374 UbtfP25976 765 aaKnown RBP15.29■□□□□ 0.04
Lhx9-201ENSMUST00000019374 Cdk11bP24788 784 aaKnown RBP15.29■□□□□ 0.04
Lhx9-201ENSMUST00000019374 Mier1Q5UAK0 511 aa15.25■□□□□ 0.03
Lhx9-201ENSMUST00000019374 Nop58Q6DFW4 536 aaKnown RBP15.19■□□□□ 0.02
Lhx9-201ENSMUST00000019374 Zcchc6Q5BLK4 1491 aaKnown RBP15.18■□□□□ 0.02
Lhx9-201ENSMUST00000019374 Myt1Q8CFC2 1127 aa15.18■□□□□ 0.02
Lhx9-201ENSMUST00000019374 Sall2Q9QX96 1004 aa15.17■□□□□ 0.02
Lhx9-201ENSMUST00000019374 Ppargc1bQ8VHJ7 1014 aa15.17■□□□□ 0.02
Lhx9-201ENSMUST00000019374 Myt1lP97500 1187 aa15.15■□□□□ 0.02
Lhx9-201ENSMUST00000019374 Csrnp3P59055 597 aa15.11■□□□□ 0.01
Lhx9-201ENSMUST00000019374 Anks4bQ8K3X6 423 aa15.09■□□□□ 0.01
Lhx9-201ENSMUST00000019374 Cep164Q5DU05 1446 aa15.02■□□□□ -0
Lhx9-201ENSMUST00000019374 Npm2Q80W85 207 aa15.02■□□□□ -0
Lhx9-201ENSMUST00000019374 1700123L14RikQ3V2K7 440 aa14.98□□□□□ -0.01
Lhx9-201ENSMUST00000019374 Pelp1Q9DBD5 1123 aaKnown RBP14.95□□□□□ -0.02
Lhx9-201ENSMUST00000019374 ClspnQ80YR7 1315 aa14.92□□□□□ -0.02
Lhx9-201ENSMUST00000019374 Gm38655A0A286YDK6 273 aa14.92□□□□□ -0.02
Lhx9-201ENSMUST00000019374 Chic1Q8CBW7 227 aa14.91□□□□□ -0.02
Lhx9-201ENSMUST00000019374 TonslQ6NZL6 1363 aa14.89□□□□□ -0.03
Lhx9-201ENSMUST00000019374 Aplp2Q06335 707 aa14.88□□□□□ -0.03
Lhx9-201ENSMUST00000019374 Tnnt3Q9QZ47 272 aa14.83□□□□□ -0.04
Lhx9-201ENSMUST00000019374 Rb1cc1Q9ESK9 1588 aa14.83□□□□□ -0.04
Lhx9-201ENSMUST00000019374 Stra8P70278 393 aa14.78□□□□□ -0.04
Lhx9-201ENSMUST00000019374 Aebp2Q9Z248 504 aaKnown RBP14.75□□□□□ -0.05
Lhx9-201ENSMUST00000019374 DiexfQ8BTT6 772 aaKnown RBP14.75□□□□□ -0.05
Lhx9-201ENSMUST00000019374 Ube2uB1AUC4 352 aa14.73□□□□□ -0.05
Lhx9-201ENSMUST00000019374 Slc24a1Q91WD8 1130 aa14.71□□□□□ -0.06
Lhx9-201ENSMUST00000019374 Plekhg3Q4VAC9 1341 aa14.61□□□□□ -0.07
Lhx9-201ENSMUST00000019374 NclP09405 707 aaKnown RBP14.59□□□□□ -0.07
Lhx9-201ENSMUST00000019374 Ap3b1Q9Z1T1 1105 aa14.58□□□□□ -0.08
Lhx9-201ENSMUST00000019374 Baz1aO88379 1555 aa14.57□□□□□ -0.08
Lhx9-201ENSMUST00000019374 Rsf1E9PWW9 1441 aaKnown RBP14.56□□□□□ -0.08
Lhx9-201ENSMUST00000019374 Mapk8ip2Q9ERE9 830 aa14.53□□□□□ -0.08
Lhx9-201ENSMUST00000019374 Brd4Q9ESU6 1400 aaKnown RBP14.53□□□□□ -0.08
Lhx9-201ENSMUST00000019374 Anp32aO35381 247 aa14.53□□□□□ -0.08
Lhx9-201ENSMUST00000019374 Eid3Q3V124 375 aa14.52□□□□□ -0.08
Lhx9-201ENSMUST00000019374 Ttbk1Q6PCN3 1308 aa14.51□□□□□ -0.09
Lhx9-201ENSMUST00000019374 Fam50aQ9WV03 339 aaKnown RBP14.5□□□□□ -0.09
Lhx9-201ENSMUST00000019374 Fam71e1A1L3C1 212 aa14.47□□□□□ -0.09
Lhx9-201ENSMUST00000019374 Rtl5Q5DTT4 599 aa14.46□□□□□ -0.09
Lhx9-201ENSMUST00000019374 Eif5bQ05D44 1216 aaKnown RBP14.45□□□□□ -0.1
Lhx9-201ENSMUST00000019374 Il27Q8K3I6 234 aa14.42□□□□□ -0.1
Lhx9-201ENSMUST00000019374 Clip1Q922J3 1391 aa14.4□□□□□ -0.1
Lhx9-201ENSMUST00000019374 Amer1Q7TS75 1132 aa14.4□□□□□ -0.1
Lhx9-201ENSMUST00000019374 Golga3P55937 1487 aa14.36□□□□□ -0.11
Lhx9-201ENSMUST00000019374 SafbD3YXK2 937 aaKnown RBP14.36□□□□□ -0.11
Lhx9-201ENSMUST00000019374 Hnrnpul2Q00PI9 745 aaKnown RBP14.36□□□□□ -0.11
Lhx9-201ENSMUST00000019374 Ccdc88bQ4QRL3 1481 aa14.34□□□□□ -0.11
Lhx9-201ENSMUST00000019374 NrdcQ8BHG1 1161 aa14.32□□□□□ -0.12
Lhx9-201ENSMUST00000019374 Bcl11aQ9QYE3 773 aa14.31□□□□□ -0.12
Lhx9-201ENSMUST00000019374 Calr4Q3TQS0 420 aa14.29□□□□□ -0.12
Lhx9-201ENSMUST00000019374 NacadQ5SWP3 1504 aa14.28□□□□□ -0.12
Lhx9-201ENSMUST00000019374 Kdm5dQ62240 1548 aa14.27□□□□□ -0.12
Lhx9-201ENSMUST00000019374 Lmod2Q3UHZ5 550 aa14.22□□□□□ -0.13
Lhx9-201ENSMUST00000019374 Ppp4r2Q0VGB7 417 aa14.19□□□□□ -0.14
Lhx9-201ENSMUST00000019374 4933416C03RikQ3V063 378 aa14.19□□□□□ -0.14
Lhx9-201ENSMUST00000019374 Wdr43Q6ZQL4 677 aaKnown RBP14.11□□□□□ -0.15
Lhx9-201ENSMUST00000019374 Smarca2Q6DIC0 1577 aa14.07□□□□□ -0.16
Lhx9-201ENSMUST00000019374 NeflP08551 543 aa14.05□□□□□ -0.16
Lhx9-201ENSMUST00000019374 Cep162Q6ZQ06 1403 aa14.02□□□□□ -0.16
Lhx9-201ENSMUST00000019374 Ccer2J3QPU5 274 aa14□□□□□ -0.17
Lhx9-201ENSMUST00000019374 BlmO88700 1416 aa14□□□□□ -0.17
Lhx9-201ENSMUST00000019374 Setd5Q5XJV7 1441 aa14□□□□□ -0.17
Lhx9-201ENSMUST00000019374 ScribQ80U72 1612 aa14□□□□□ -0.17
Lhx9-201ENSMUST00000019374 Mrs2Q5NCE8 434 aa13.99□□□□□ -0.17
Lhx9-201ENSMUST00000019374 Crybg2B7ZCC2 1516 aa13.99□□□□□ -0.17
Lhx9-201ENSMUST00000019374 DaxxO35613 739 aa13.98□□□□□ -0.17
Lhx9-201ENSMUST00000019374 Anp32bQ9EST5 272 aaKnown RBP13.95□□□□□ -0.18
Lhx9-201ENSMUST00000019374 P3h3Q8CG70 732 aa13.94□□□□□ -0.18
Lhx9-201ENSMUST00000019374 Eea1Q8BL66 1411 aa13.94□□□□□ -0.18
Lhx9-201ENSMUST00000019374 Cecr2E9Q2Z1 1453 aa13.93□□□□□ -0.18
Lhx9-201ENSMUST00000019374 Nolc1E9Q5C9 702 aaKnown RBP13.93□□□□□ -0.18
Lhx9-201ENSMUST00000019374 Supt16hQ920B9 1047 aa13.91□□□□□ -0.18
Lhx9-201ENSMUST00000019374 Gm13697A2AK42 830 aa13.87□□□□□ -0.19
Lhx9-201ENSMUST00000019374 Hspa5P20029 655 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms