RNA–Protein interactions for RNA: ENSMUST00000017881.2

Mmp9-201, Transcript of Matrix metalloproteinase-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Mmp9, Length 3,175 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9-201ENSMUST00000017881 NischQ80TM9 1593 aa16.9■□□□□ 0.3
Mmp9-201ENSMUST00000017881 Gm35339A0A140LHH9 1649 aa16.82■□□□□ 0.28
Mmp9-201ENSMUST00000017881 DiexfQ8BTT6 772 aaKnown RBP16.57■□□□□ 0.24
Mmp9-201ENSMUST00000017881 Rpgrip1Q9EPQ2 1331 aa16.55■□□□□ 0.24
Mmp9-201ENSMUST00000017881 Abcc9P70170 1546 aa16.44■□□□□ 0.22
Mmp9-201ENSMUST00000017881 Rhox8Q6VSS7 320 aa16.25■□□□□ 0.19
Mmp9-201ENSMUST00000017881 Abcc8B2RUS7 1588 aa16.16■□□□□ 0.18
Mmp9-201ENSMUST00000017881 Pcgf6Q99NA9 353 aa16.08■□□□□ 0.17
Mmp9-201ENSMUST00000017881 Acin1Q9JIX8 1338 aaKnown RBP16.04■□□□□ 0.16
Mmp9-201ENSMUST00000017881 Ttbk1Q6PCN3 1308 aa15.96■□□□□ 0.14
Mmp9-201ENSMUST00000017881 Amer1Q7TS75 1132 aa15.95■□□□□ 0.14
Mmp9-201ENSMUST00000017881 Ube2uB1AUC4 352 aa15.93■□□□□ 0.14
Mmp9-201ENSMUST00000017881 Plppr3Q7TPB0 716 aa15.86■□□□□ 0.13
Mmp9-201ENSMUST00000017881 Ehmt2Q9Z148 1263 aaKnown RBP15.86■□□□□ 0.13
Mmp9-201ENSMUST00000017881 Neurod1Q60867 357 aa15.61■□□□□ 0.09
Mmp9-201ENSMUST00000017881 Myt1Q8CFC2 1127 aa15.58■□□□□ 0.08
Mmp9-201ENSMUST00000017881 Supt5hO55201 1082 aaKnown RBP15.56■□□□□ 0.08
Mmp9-201ENSMUST00000017881 Bcl11aQ9QYE3 773 aa15.55■□□□□ 0.08
Mmp9-201ENSMUST00000017881 CatipB9EKE5 520 aa15.55■□□□□ 0.08
Mmp9-201ENSMUST00000017881 Ccdc180J3QNE4 1664 aa15.51■□□□□ 0.07
Mmp9-201ENSMUST00000017881 CenpbP27790 599 aa15.45■□□□□ 0.06
Mmp9-201ENSMUST00000017881 Rtl1Q7M732 1744 aa15.44■□□□□ 0.06
Mmp9-201ENSMUST00000017881 Las1lA2BE28 776 aaKnown RBP15.39■□□□□ 0.05
Mmp9-201ENSMUST00000017881 Trim41Q5NCC3 630 aa15.34■□□□□ 0.05
Mmp9-201ENSMUST00000017881 1700123L14RikQ3V2K7 440 aa15.32■□□□□ 0.04
Mmp9-201ENSMUST00000017881 PrkcshO08795 521 aa15.31■□□□□ 0.04
Mmp9-201ENSMUST00000017881 ScribQ80U72 1612 aa15.2■□□□□ 0.02
Mmp9-201ENSMUST00000017881 Csrnp3P59055 597 aa15.15■□□□□ 0.02
Mmp9-201ENSMUST00000017881 Dcaf1Q80TR8 1506 aa15.1■□□□□ 0.01
Mmp9-201ENSMUST00000017881 ArxO35085 564 aa15.08■□□□□ 0
Mmp9-201ENSMUST00000017881 Zeb1Q64318 1117 aa15□□□□□ -0.01
Mmp9-201ENSMUST00000017881 Anks4bQ8K3X6 423 aa14.94□□□□□ -0.02
Mmp9-201ENSMUST00000017881 Cngb1E1AZ71 1325 aa14.89□□□□□ -0.03
Mmp9-201ENSMUST00000017881 Zcchc6Q5BLK4 1491 aaKnown RBP14.86□□□□□ -0.03
Mmp9-201ENSMUST00000017881 Sall2Q9QX96 1004 aa14.85□□□□□ -0.03
Mmp9-201ENSMUST00000017881 Gm38655A0A286YDK6 273 aa14.84□□□□□ -0.03
Mmp9-201ENSMUST00000017881 Kdm5dQ62240 1548 aa14.83□□□□□ -0.04
Mmp9-201ENSMUST00000017881 Ccdc136Q3TVA9 1136 aa14.82□□□□□ -0.04
Mmp9-201ENSMUST00000017881 HrcG5E8J6 738 aa14.8□□□□□ -0.04
Mmp9-201ENSMUST00000017881 Aplp2Q06335 707 aa14.79□□□□□ -0.04
Mmp9-201ENSMUST00000017881 Gtf3c5Q8R2T8 520 aa14.79□□□□□ -0.04
Mmp9-201ENSMUST00000017881 Rb1cc1Q9ESK9 1588 aa14.78□□□□□ -0.04
Mmp9-201ENSMUST00000017881 NacadQ5SWP3 1504 aa14.73□□□□□ -0.05
Mmp9-201ENSMUST00000017881 Pknox2Q8BG99 474 aa14.69□□□□□ -0.06
Mmp9-201ENSMUST00000017881 Baz1aO88379 1555 aa14.62□□□□□ -0.07
Mmp9-201ENSMUST00000017881 Eif5bQ05D44 1216 aaKnown RBP14.58□□□□□ -0.08
Mmp9-201ENSMUST00000017881 BccipQ9CWI3 316 aa14.57□□□□□ -0.08
Mmp9-201ENSMUST00000017881 Cdk11bP24788 784 aaKnown RBP14.53□□□□□ -0.08
Mmp9-201ENSMUST00000017881 Ifnlr1Q8CGK5 535 aa14.52□□□□□ -0.09
Mmp9-201ENSMUST00000017881 TimelessQ9R1X4 1197 aa14.51□□□□□ -0.09
Mmp9-201ENSMUST00000017881 NefmP08553 848 aa14.49□□□□□ -0.09
Mmp9-201ENSMUST00000017881 Fam71e1A1L3C1 212 aa14.48□□□□□ -0.09
Mmp9-201ENSMUST00000017881 Nop58Q6DFW4 536 aaKnown RBP14.48□□□□□ -0.09
Mmp9-201ENSMUST00000017881 Wdr66E9Q743 1299 aa14.46□□□□□ -0.09
Mmp9-201ENSMUST00000017881 Ppargc1bQ8VHJ7 1014 aa14.45□□□□□ -0.1
Mmp9-201ENSMUST00000017881 Sycp2Q9CUU3 1500 aa14.44□□□□□ -0.1
Mmp9-201ENSMUST00000017881 Crybg2B7ZCC2 1516 aa14.43□□□□□ -0.1
Mmp9-201ENSMUST00000017881 Mier1Q5UAK0 511 aa14.42□□□□□ -0.1
Mmp9-201ENSMUST00000017881 Rsph4aQ8BYM7 716 aa14.39□□□□□ -0.11
Mmp9-201ENSMUST00000017881 Aebp2Q9Z248 504 aaKnown RBP14.38□□□□□ -0.11
Mmp9-201ENSMUST00000017881 Mapk8ip2Q9ERE9 830 aa14.37□□□□□ -0.11
Mmp9-201ENSMUST00000017881 Q8BT18 775 aa14.32□□□□□ -0.12
Mmp9-201ENSMUST00000017881 Smarca2Q6DIC0 1577 aa14.3□□□□□ -0.12
Mmp9-201ENSMUST00000017881 Fgd1P52734 960 aa14.3□□□□□ -0.12
Mmp9-201ENSMUST00000017881 SafbD3YXK2 937 aaKnown RBP14.28□□□□□ -0.12
Mmp9-201ENSMUST00000017881 NrdcQ8BHG1 1161 aa14.28□□□□□ -0.12
Mmp9-201ENSMUST00000017881 UbtfP25976 765 aaKnown RBP14.24□□□□□ -0.13
Mmp9-201ENSMUST00000017881 Slc4a1apE9PX68 744 aa14.22□□□□□ -0.13
Mmp9-201ENSMUST00000017881 ClspnQ80YR7 1315 aa14.18□□□□□ -0.14
Mmp9-201ENSMUST00000017881 BicraF8VPZ9 1578 aa14.17□□□□□ -0.14
Mmp9-201ENSMUST00000017881 Ncbp3Q8BZR9 615 aaKnown RBP14.16□□□□□ -0.14
Mmp9-201ENSMUST00000017881 Hnrnpul2Q00PI9 745 aaKnown RBP14.16□□□□□ -0.14
Mmp9-201ENSMUST00000017881 Scaf1Q5U4C3 1256 aaKnown RBP14.16□□□□□ -0.14
Mmp9-201ENSMUST00000017881 Znf316Q6PGE4 1016 aa14.15□□□□□ -0.14
Mmp9-201ENSMUST00000017881 Gab3Q8BSM5 595 aa14.07□□□□□ -0.16
Mmp9-201ENSMUST00000017881 Cep164Q5DU05 1446 aa14.05□□□□□ -0.16
Mmp9-201ENSMUST00000017881 Esf1Q3V1V3 845 aaKnown RBP14.03□□□□□ -0.16
Mmp9-201ENSMUST00000017881 Hdac5Q9Z2V6 1113 aa14.01□□□□□ -0.17
Mmp9-201ENSMUST00000017881 Cecr2E9Q2Z1 1453 aa14□□□□□ -0.17
Mmp9-201ENSMUST00000017881 Ap3b1Q9Z1T1 1105 aa13.96□□□□□ -0.17
Mmp9-201ENSMUST00000017881 Zfp777B9EKF4 885 aa13.96□□□□□ -0.17
Mmp9-201ENSMUST00000017881 Arid3aQ62431 601 aa13.94□□□□□ -0.18
Mmp9-201ENSMUST00000017881 Anp32aO35381 247 aa13.92□□□□□ -0.18
Mmp9-201ENSMUST00000017881 Tnnt3Q9QZ47 272 aa13.91□□□□□ -0.18
Mmp9-201ENSMUST00000017881 Brd4Q9ESU6 1400 aaKnown RBP13.87□□□□□ -0.19
Mmp9-201ENSMUST00000017881 Ube2q2Q8K2Z8 378 aa13.86□□□□□ -0.19
Mmp9-201ENSMUST00000017881 Nolc1E9Q5C9 702 aaKnown RBP13.85□□□□□ -0.19
Mmp9-201ENSMUST00000017881 Synj1Q8CHC4 1574 aa13.83□□□□□ -0.2
Mmp9-201ENSMUST00000017881 Rtl5Q5DTT4 599 aa13.82□□□□□ -0.2
Mmp9-201ENSMUST00000017881 Kcna4Q61423 654 aa13.82□□□□□ -0.2
Mmp9-201ENSMUST00000017881 Chic1Q8CBW7 227 aa13.81□□□□□ -0.2
Mmp9-201ENSMUST00000017881 TonslQ6NZL6 1363 aa13.81□□□□□ -0.2
Mmp9-201ENSMUST00000017881 Samd1D3YXK1 519 aa13.8□□□□□ -0.2
Mmp9-201ENSMUST00000017881 CftrP26361 1476 aa13.77□□□□□ -0.21
Mmp9-201ENSMUST00000017881 Znf326O88291 580 aa13.75□□□□□ -0.21
Mmp9-201ENSMUST00000017881 Il27Q8K3I6 234 aa13.75□□□□□ -0.21
Mmp9-201ENSMUST00000017881 Pelp1Q9DBD5 1123 aaKnown RBP13.75□□□□□ -0.21
Mmp9-201ENSMUST00000017881 Smarca4Q3TKT4 1613 aaKnown RBP13.74□□□□□ -0.21
Mmp9-201ENSMUST00000017881 Fbxo3Q9DC63 480 aa13.72□□□□□ -0.21
Mmp9-201ENSMUST00000017881 Plcd4Q8K3R3 807 aa13.71□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms