RNA–Protein interactions for RNA: ENSMUST00000016907.7

Scube1-201, Transcript of Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scube1, Length 3,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1-201ENSMUST00000016907 Rhox8Q6VSS7 320 aa26.53■■□□□ 1.84
Scube1-201ENSMUST00000016907 NischQ80TM9 1593 aa24.09■■□□□ 1.45
Scube1-201ENSMUST00000016907 Ccdc136Q3TVA9 1136 aa24.02■■□□□ 1.44
Scube1-201ENSMUST00000016907 Ehmt2Q9Z148 1263 aaKnown RBP24.01■■□□□ 1.43
Scube1-201ENSMUST00000016907 Gm35339A0A140LHH9 1649 aa23.66■■□□□ 1.38
Scube1-201ENSMUST00000016907 Cngb1E1AZ71 1325 aa23.32■■□□□ 1.32
Scube1-201ENSMUST00000016907 Esf1Q3V1V3 845 aaKnown RBP23.28■■□□□ 1.32
Scube1-201ENSMUST00000016907 Gab3Q8BSM5 595 aa23.24■■□□□ 1.31
Scube1-201ENSMUST00000016907 Trim41Q5NCC3 630 aa23.04■■□□□ 1.28
Scube1-201ENSMUST00000016907 Abcc9P70170 1546 aa22.81■■□□□ 1.24
Scube1-201ENSMUST00000016907 Rpgrip1Q9EPQ2 1331 aa22.76■■□□□ 1.23
Scube1-201ENSMUST00000016907 Abcc8B2RUS7 1588 aa22.75■■□□□ 1.23
Scube1-201ENSMUST00000016907 Myt1lP97500 1187 aa22.67■■□□□ 1.22
Scube1-201ENSMUST00000016907 Zeb1Q64318 1117 aa22.58■■□□□ 1.21
Scube1-201ENSMUST00000016907 Npm2Q80W85 207 aa22.57■■□□□ 1.2
Scube1-201ENSMUST00000016907 Wdr66E9Q743 1299 aa22.4■■□□□ 1.18
Scube1-201ENSMUST00000016907 Ube2uB1AUC4 352 aa22.27■■□□□ 1.16
Scube1-201ENSMUST00000016907 Zcchc6Q5BLK4 1491 aaKnown RBP22.23■■□□□ 1.15
Scube1-201ENSMUST00000016907 Il27Q8K3I6 234 aa22.22■■□□□ 1.15
Scube1-201ENSMUST00000016907 UbtfP25976 765 aaKnown RBP22.19■■□□□ 1.14
Scube1-201ENSMUST00000016907 Las1lA2BE28 776 aaKnown RBP22.11■■□□□ 1.13
Scube1-201ENSMUST00000016907 HrcG5E8J6 738 aa22.02■■□□□ 1.12
Scube1-201ENSMUST00000016907 Acin1Q9JIX8 1338 aaKnown RBP22.02■■□□□ 1.12
Scube1-201ENSMUST00000016907 Ccdc180J3QNE4 1664 aa21.82■■□□□ 1.08
Scube1-201ENSMUST00000016907 Ap3b1Q9Z1T1 1105 aa21.76■■□□□ 1.07
Scube1-201ENSMUST00000016907 Rtl1Q7M732 1744 aa21.76■■□□□ 1.07
Scube1-201ENSMUST00000016907 ScribQ80U72 1612 aa21.7■■□□□ 1.06
Scube1-201ENSMUST00000016907 Ppargc1bQ8VHJ7 1014 aa21.68■■□□□ 1.06
Scube1-201ENSMUST00000016907 NefmP08553 848 aa21.54■■□□□ 1.04
Scube1-201ENSMUST00000016907 Fam50aQ9WV03 339 aaKnown RBP21.45■■□□□ 1.02
Scube1-201ENSMUST00000016907 Chic1Q8CBW7 227 aa21.42■■□□□ 1.02
Scube1-201ENSMUST00000016907 Pcgf6Q99NA9 353 aa21.4■■□□□ 1.02
Scube1-201ENSMUST00000016907 Slc24a1Q91WD8 1130 aa21.38■■□□□ 1.01
Scube1-201ENSMUST00000016907 NacadQ5SWP3 1504 aa21.36■■□□□ 1.01
Scube1-201ENSMUST00000016907 Plekhg3Q4VAC9 1341 aa21.28■■□□□ 1
Scube1-201ENSMUST00000016907 Mier1Q5UAK0 511 aa21.27■■□□□ 1
Scube1-201ENSMUST00000016907 Supt5hO55201 1082 aaKnown RBP21.26■□□□□ 0.99
Scube1-201ENSMUST00000016907 Neurod1Q60867 357 aa21.25■□□□□ 0.99
Scube1-201ENSMUST00000016907 Lmod2Q3UHZ5 550 aa21.23■□□□□ 0.99
Scube1-201ENSMUST00000016907 Kdm5dQ62240 1548 aa21.19■□□□□ 0.98
Scube1-201ENSMUST00000016907 Npm1Q61937 292 aaKnown RBP21.13■□□□□ 0.97
Scube1-201ENSMUST00000016907 Rb1cc1Q9ESK9 1588 aa21.12■□□□□ 0.97
Scube1-201ENSMUST00000016907 Dcaf1Q80TR8 1506 aa21.06■□□□□ 0.96
Scube1-201ENSMUST00000016907 NclP09405 707 aaKnown RBP21.04■□□□□ 0.96
Scube1-201ENSMUST00000016907 Eid3Q3V124 375 aa20.98■□□□□ 0.95
Scube1-201ENSMUST00000016907 Zbtb7cQ8VCZ7 619 aa20.98■□□□□ 0.95
Scube1-201ENSMUST00000016907 Cdk11bP24788 784 aaKnown RBP20.95■□□□□ 0.94
Scube1-201ENSMUST00000016907 Brd4Q9ESU6 1400 aaKnown RBP20.94■□□□□ 0.94
Scube1-201ENSMUST00000016907 TonslQ6NZL6 1363 aa20.89■□□□□ 0.94
Scube1-201ENSMUST00000016907 Nop58Q6DFW4 536 aaKnown RBP20.87■□□□□ 0.93
Scube1-201ENSMUST00000016907 Mapk8ip2Q9ERE9 830 aa20.87■□□□□ 0.93
Scube1-201ENSMUST00000016907 Sycp2Q9CUU3 1500 aa20.85■□□□□ 0.93
Scube1-201ENSMUST00000016907 Ifnlr1Q8CGK5 535 aa20.82■□□□□ 0.92
Scube1-201ENSMUST00000016907 Cep164Q5DU05 1446 aa20.79■□□□□ 0.92
Scube1-201ENSMUST00000016907 Ubl4bQ9CQ84 188 aa20.76■□□□□ 0.91
Scube1-201ENSMUST00000016907 Fkbp15Q6P9Q6 1216 aaKnown RBP20.76■□□□□ 0.91
Scube1-201ENSMUST00000016907 Clip1Q922J3 1391 aa20.71■□□□□ 0.91
Scube1-201ENSMUST00000016907 Zbtb4Q5F293 982 aa20.68■□□□□ 0.9
Scube1-201ENSMUST00000016907 Eif5bQ05D44 1216 aaKnown RBP20.67■□□□□ 0.9
Scube1-201ENSMUST00000016907 Os9Q8K2C7 672 aa20.62■□□□□ 0.89
Scube1-201ENSMUST00000016907 Sall2Q9QX96 1004 aa20.62■□□□□ 0.89
Scube1-201ENSMUST00000016907 CenpbP27790 599 aa20.61■□□□□ 0.89
Scube1-201ENSMUST00000016907 Stra8P70278 393 aa20.61■□□□□ 0.89
Scube1-201ENSMUST00000016907 Hnrnpul2Q00PI9 745 aaKnown RBP20.61■□□□□ 0.89
Scube1-201ENSMUST00000016907 Baz1aO88379 1555 aa20.59■□□□□ 0.89
Scube1-201ENSMUST00000016907 NrdcQ8BHG1 1161 aa20.55■□□□□ 0.88
Scube1-201ENSMUST00000016907 Chic2Q9D9G3 165 aa20.47■□□□□ 0.87
Scube1-201ENSMUST00000016907 Rsf1E9PWW9 1441 aaKnown RBP20.46■□□□□ 0.87
Scube1-201ENSMUST00000016907 Pelp1Q9DBD5 1123 aaKnown RBP20.44■□□□□ 0.86
Scube1-201ENSMUST00000016907 ClspnQ80YR7 1315 aa20.4■□□□□ 0.86
Scube1-201ENSMUST00000016907 Golga3P55937 1487 aa20.38■□□□□ 0.85
Scube1-201ENSMUST00000016907 BicraF8VPZ9 1578 aa20.36■□□□□ 0.85
Scube1-201ENSMUST00000016907 Prdm10Q3UTQ7 1184 aa20.36■□□□□ 0.85
Scube1-201ENSMUST00000016907 Gm38655A0A286YDK6 273 aa20.35■□□□□ 0.85
Scube1-201ENSMUST00000016907 Kif15Q6P9L6 1387 aa20.34■□□□□ 0.85
Scube1-201ENSMUST00000016907 Erich6D3Z6S9 713 aa20.33■□□□□ 0.85
Scube1-201ENSMUST00000016907 BlmO88700 1416 aa20.33■□□□□ 0.84
Scube1-201ENSMUST00000016907 Anp32bQ9EST5 272 aaKnown RBP20.29■□□□□ 0.84
Scube1-201ENSMUST00000016907 Crybg2B7ZCC2 1516 aa20.29■□□□□ 0.84
Scube1-201ENSMUST00000016907 Setd5Q5XJV7 1441 aa20.26■□□□□ 0.83
Scube1-201ENSMUST00000016907 Ccdc88bQ4QRL3 1481 aa20.25■□□□□ 0.83
Scube1-201ENSMUST00000016907 Aebp2Q9Z248 504 aaKnown RBP20.24■□□□□ 0.83
Scube1-201ENSMUST00000016907 Plppr3Q7TPB0 716 aa20.22■□□□□ 0.83
Scube1-201ENSMUST00000016907 Pds5bQ4VA53 1446 aaKnown RBP20.17■□□□□ 0.82
Scube1-201ENSMUST00000016907 Tnnt3Q9QZ47 272 aa20.15■□□□□ 0.82
Scube1-201ENSMUST00000016907 Ttbk1Q6PCN3 1308 aa20.12■□□□□ 0.81
Scube1-201ENSMUST00000016907 Cecr2E9Q2Z1 1453 aa20.08■□□□□ 0.81
Scube1-201ENSMUST00000016907 Atp1b4Q99ME6 356 aa20.07■□□□□ 0.8
Scube1-201ENSMUST00000016907 Gm13697A2AK42 830 aa20.07■□□□□ 0.8
Scube1-201ENSMUST00000016907 Csrnp3P59055 597 aa20.04■□□□□ 0.8
Scube1-201ENSMUST00000016907 NeflP08551 543 aa20.02■□□□□ 0.8
Scube1-201ENSMUST00000016907 Arhgap27A2AB59 869 aa19.94■□□□□ 0.78
Scube1-201ENSMUST00000016907 Atad2bE9Q166 1460 aaKnown RBP19.91■□□□□ 0.78
Scube1-201ENSMUST00000016907 Eea1Q8BL66 1411 aa19.91■□□□□ 0.78
Scube1-201ENSMUST00000016907 Rgl3Q3UYI5 709 aa19.9■□□□□ 0.78
Scube1-201ENSMUST00000016907 Ccer2J3QPU5 274 aa19.89■□□□□ 0.77
Scube1-201ENSMUST00000016907 Amer1Q7TS75 1132 aa19.88■□□□□ 0.77
Scube1-201ENSMUST00000016907 Ercc6F8VPZ5 1481 aa19.87■□□□□ 0.77
Scube1-201ENSMUST00000016907 Mrs2Q5NCE8 434 aa19.86■□□□□ 0.77
Scube1-201ENSMUST00000016907 Ccdc18Q640L5 1455 aa19.84■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms