RNA–Protein interactions for RNA: ENSMUST00000016315.15

Lamb3-201, Transcript of Laminin subunit beta-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lamb3, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lamb3-201ENSMUST00000016315 Rhox8Q6VSS7 320 aa16.04■□□□□ 0.16
Lamb3-201ENSMUST00000016315 Rpgrip1Q9EPQ2 1331 aa15.3■□□□□ 0.04
Lamb3-201ENSMUST00000016315 NischQ80TM9 1593 aa14.95□□□□□ -0.02
Lamb3-201ENSMUST00000016315 Ehmt2Q9Z148 1263 aaKnown RBP14.72□□□□□ -0.05
Lamb3-201ENSMUST00000016315 Ccdc136Q3TVA9 1136 aa14.44□□□□□ -0.1
Lamb3-201ENSMUST00000016315 Acin1Q9JIX8 1338 aaKnown RBP14.41□□□□□ -0.1
Lamb3-201ENSMUST00000016315 Las1lA2BE28 776 aaKnown RBP14.32□□□□□ -0.12
Lamb3-201ENSMUST00000016315 Ccdc180J3QNE4 1664 aa14.26□□□□□ -0.13
Lamb3-201ENSMUST00000016315 Trim41Q5NCC3 630 aa14.22□□□□□ -0.13
Lamb3-201ENSMUST00000016315 Abcc9P70170 1546 aa14.16□□□□□ -0.14
Lamb3-201ENSMUST00000016315 Rtl1Q7M732 1744 aa14.15□□□□□ -0.14
Lamb3-201ENSMUST00000016315 Zeb1Q64318 1117 aa14.12□□□□□ -0.15
Lamb3-201ENSMUST00000016315 HrcG5E8J6 738 aa14.11□□□□□ -0.15
Lamb3-201ENSMUST00000016315 Cngb1E1AZ71 1325 aa14.05□□□□□ -0.16
Lamb3-201ENSMUST00000016315 Gab3Q8BSM5 595 aa14.04□□□□□ -0.16
Lamb3-201ENSMUST00000016315 Wdr66E9Q743 1299 aa14.03□□□□□ -0.16
Lamb3-201ENSMUST00000016315 Pcgf6Q99NA9 353 aa14.01□□□□□ -0.17
Lamb3-201ENSMUST00000016315 Abcc8B2RUS7 1588 aa13.97□□□□□ -0.17
Lamb3-201ENSMUST00000016315 NefmP08553 848 aa13.92□□□□□ -0.18
Lamb3-201ENSMUST00000016315 Esf1Q3V1V3 845 aaKnown RBP13.91□□□□□ -0.18
Lamb3-201ENSMUST00000016315 Gm35339A0A140LHH9 1649 aa13.85□□□□□ -0.19
Lamb3-201ENSMUST00000016315 CenpbP27790 599 aa13.69□□□□□ -0.22
Lamb3-201ENSMUST00000016315 Supt5hO55201 1082 aaKnown RBP13.68□□□□□ -0.22
Lamb3-201ENSMUST00000016315 Myt1lP97500 1187 aa13.64□□□□□ -0.23
Lamb3-201ENSMUST00000016315 UbtfP25976 765 aaKnown RBP13.63□□□□□ -0.23
Lamb3-201ENSMUST00000016315 Npm2Q80W85 207 aa13.63□□□□□ -0.23
Lamb3-201ENSMUST00000016315 Pelp1Q9DBD5 1123 aaKnown RBP13.57□□□□□ -0.24
Lamb3-201ENSMUST00000016315 Cdk11bP24788 784 aaKnown RBP13.55□□□□□ -0.24
Lamb3-201ENSMUST00000016315 Dcaf1Q80TR8 1506 aa13.49□□□□□ -0.25
Lamb3-201ENSMUST00000016315 Myt1Q8CFC2 1127 aa13.45□□□□□ -0.26
Lamb3-201ENSMUST00000016315 Zcchc6Q5BLK4 1491 aaKnown RBP13.45□□□□□ -0.26
Lamb3-201ENSMUST00000016315 Nop58Q6DFW4 536 aaKnown RBP13.44□□□□□ -0.26
Lamb3-201ENSMUST00000016315 Ube2uB1AUC4 352 aa13.43□□□□□ -0.26
Lamb3-201ENSMUST00000016315 Mier1Q5UAK0 511 aa13.4□□□□□ -0.26
Lamb3-201ENSMUST00000016315 Stra8P70278 393 aa13.38□□□□□ -0.27
Lamb3-201ENSMUST00000016315 Neurod1Q60867 357 aa13.34□□□□□ -0.27
Lamb3-201ENSMUST00000016315 Tnnt3Q9QZ47 272 aa13.26□□□□□ -0.29
Lamb3-201ENSMUST00000016315 Ppargc1bQ8VHJ7 1014 aa13.26□□□□□ -0.29
Lamb3-201ENSMUST00000016315 Cep164Q5DU05 1446 aa13.25□□□□□ -0.29
Lamb3-201ENSMUST00000016315 TonslQ6NZL6 1363 aa13.24□□□□□ -0.29
Lamb3-201ENSMUST00000016315 Sall2Q9QX96 1004 aa13.21□□□□□ -0.3
Lamb3-201ENSMUST00000016315 ClspnQ80YR7 1315 aa13.19□□□□□ -0.3
Lamb3-201ENSMUST00000016315 Anks4bQ8K3X6 423 aa13.18□□□□□ -0.3
Lamb3-201ENSMUST00000016315 Slc24a1Q91WD8 1130 aa13.14□□□□□ -0.31
Lamb3-201ENSMUST00000016315 Chic1Q8CBW7 227 aa13.1□□□□□ -0.31
Lamb3-201ENSMUST00000016315 Rb1cc1Q9ESK9 1588 aa13.09□□□□□ -0.31
Lamb3-201ENSMUST00000016315 NclP09405 707 aaKnown RBP13.08□□□□□ -0.31
Lamb3-201ENSMUST00000016315 Il27Q8K3I6 234 aa13.06□□□□□ -0.32
Lamb3-201ENSMUST00000016315 Csrnp3P59055 597 aa13.06□□□□□ -0.32
Lamb3-201ENSMUST00000016315 NacadQ5SWP3 1504 aa13.05□□□□□ -0.32
Lamb3-201ENSMUST00000016315 Fam50aQ9WV03 339 aaKnown RBP13.05□□□□□ -0.32
Lamb3-201ENSMUST00000016315 Ap3b1Q9Z1T1 1105 aa13.03□□□□□ -0.32
Lamb3-201ENSMUST00000016315 Aplp2Q06335 707 aa13.01□□□□□ -0.33
Lamb3-201ENSMUST00000016315 Brd4Q9ESU6 1400 aaKnown RBP13□□□□□ -0.33
Lamb3-201ENSMUST00000016315 Plekhg3Q4VAC9 1341 aa12.97□□□□□ -0.33
Lamb3-201ENSMUST00000016315 Kdm5dQ62240 1548 aa12.94□□□□□ -0.34
Lamb3-201ENSMUST00000016315 NrdcQ8BHG1 1161 aa12.94□□□□□ -0.34
Lamb3-201ENSMUST00000016315 Rtl5Q5DTT4 599 aa12.93□□□□□ -0.34
Lamb3-201ENSMUST00000016315 Amer1Q7TS75 1132 aa12.91□□□□□ -0.34
Lamb3-201ENSMUST00000016315 1700123L14RikQ3V2K7 440 aa12.88□□□□□ -0.35
Lamb3-201ENSMUST00000016315 Gm38655A0A286YDK6 273 aa12.87□□□□□ -0.35
Lamb3-201ENSMUST00000016315 Anp32aO35381 247 aa12.87□□□□□ -0.35
Lamb3-201ENSMUST00000016315 Eif5bQ05D44 1216 aaKnown RBP12.87□□□□□ -0.35
Lamb3-201ENSMUST00000016315 Clip1Q922J3 1391 aa12.85□□□□□ -0.35
Lamb3-201ENSMUST00000016315 Eid3Q3V124 375 aa12.84□□□□□ -0.35
Lamb3-201ENSMUST00000016315 Baz1aO88379 1555 aa12.84□□□□□ -0.35
Lamb3-201ENSMUST00000016315 Ttbk1Q6PCN3 1308 aa12.83□□□□□ -0.36
Lamb3-201ENSMUST00000016315 ScribQ80U72 1612 aa12.83□□□□□ -0.36
Lamb3-201ENSMUST00000016315 DiexfQ8BTT6 772 aaKnown RBP12.83□□□□□ -0.36
Lamb3-201ENSMUST00000016315 Aebp2Q9Z248 504 aaKnown RBP12.81□□□□□ -0.36
Lamb3-201ENSMUST00000016315 Anp32bQ9EST5 272 aaKnown RBP12.77□□□□□ -0.36
Lamb3-201ENSMUST00000016315 Mapk8ip2Q9ERE9 830 aa12.76□□□□□ -0.37
Lamb3-201ENSMUST00000016315 Lmod2Q3UHZ5 550 aa12.74□□□□□ -0.37
Lamb3-201ENSMUST00000016315 Rsf1E9PWW9 1441 aaKnown RBP12.73□□□□□ -0.37
Lamb3-201ENSMUST00000016315 NeflP08551 543 aa12.73□□□□□ -0.37
Lamb3-201ENSMUST00000016315 Golga3P55937 1487 aa12.72□□□□□ -0.37
Lamb3-201ENSMUST00000016315 4933416C03RikQ3V063 378 aa12.71□□□□□ -0.37
Lamb3-201ENSMUST00000016315 Ccer2J3QPU5 274 aa12.66□□□□□ -0.38
Lamb3-201ENSMUST00000016315 Calr4Q3TQS0 420 aa12.64□□□□□ -0.39
Lamb3-201ENSMUST00000016315 Npm1Q61937 292 aaKnown RBP12.62□□□□□ -0.39
Lamb3-201ENSMUST00000016315 Sycp2Q9CUU3 1500 aa12.61□□□□□ -0.39
Lamb3-201ENSMUST00000016315 Fam71e1A1L3C1 212 aa12.55□□□□□ -0.4
Lamb3-201ENSMUST00000016315 Ubl4bQ9CQ84 188 aa12.54□□□□□ -0.4
Lamb3-201ENSMUST00000016315 Ppp4r2Q0VGB7 417 aa12.53□□□□□ -0.4
Lamb3-201ENSMUST00000016315 Ccdc88bQ4QRL3 1481 aa12.53□□□□□ -0.4
Lamb3-201ENSMUST00000016315 BlmO88700 1416 aa12.51□□□□□ -0.41
Lamb3-201ENSMUST00000016315 Wdr43Q6ZQL4 677 aaKnown RBP12.5□□□□□ -0.41
Lamb3-201ENSMUST00000016315 Setd5Q5XJV7 1441 aa12.5□□□□□ -0.41
Lamb3-201ENSMUST00000016315 Mrs2Q5NCE8 434 aa12.47□□□□□ -0.41
Lamb3-201ENSMUST00000016315 DaxxO35613 739 aa12.46□□□□□ -0.41
Lamb3-201ENSMUST00000016315 Hnrnpul2Q00PI9 745 aaKnown RBP12.46□□□□□ -0.42
Lamb3-201ENSMUST00000016315 Eea1Q8BL66 1411 aa12.43□□□□□ -0.42
Lamb3-201ENSMUST00000016315 Crybg2B7ZCC2 1516 aa12.42□□□□□ -0.42
Lamb3-201ENSMUST00000016315 SafbD3YXK2 937 aaKnown RBP12.41□□□□□ -0.42
Lamb3-201ENSMUST00000016315 Os9Q8K2C7 672 aa12.41□□□□□ -0.42
Lamb3-201ENSMUST00000016315 Cecr2E9Q2Z1 1453 aa12.41□□□□□ -0.42
Lamb3-201ENSMUST00000016315 Chic2Q9D9G3 165 aa12.37□□□□□ -0.43
Lamb3-201ENSMUST00000016315 Cep162Q6ZQ06 1403 aa12.37□□□□□ -0.43
Lamb3-201ENSMUST00000016315 Smarca2Q6DIC0 1577 aa12.37□□□□□ -0.43
Lamb3-201ENSMUST00000016315 Upf2A2AT37 1269 aaKnown RBP12.33□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 73.6 ms