RNA–Protein interactions for RNA: ENSMUST00000014812.12

Chfr-201, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Chfr, Length 3,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-201ENSMUST00000014812 NischQ80TM9 1593 aa23.51■■□□□ 1.35
Chfr-201ENSMUST00000014812 Rhox8Q6VSS7 320 aa23.39■■□□□ 1.33
Chfr-201ENSMUST00000014812 Abcc9P70170 1546 aa22.63■■□□□ 1.21
Chfr-201ENSMUST00000014812 Ehmt2Q9Z148 1263 aaKnown RBP22.28■■□□□ 1.16
Chfr-201ENSMUST00000014812 Rpgrip1Q9EPQ2 1331 aa22.17■■□□□ 1.14
Chfr-201ENSMUST00000014812 Gm35339A0A140LHH9 1649 aa22.16■■□□□ 1.14
Chfr-201ENSMUST00000014812 Abcc8B2RUS7 1588 aa22.04■■□□□ 1.12
Chfr-201ENSMUST00000014812 Ccdc180J3QNE4 1664 aa22■■□□□ 1.11
Chfr-201ENSMUST00000014812 Rtl1Q7M732 1744 aa21.98■■□□□ 1.11
Chfr-201ENSMUST00000014812 Acin1Q9JIX8 1338 aaKnown RBP21.8■■□□□ 1.08
Chfr-201ENSMUST00000014812 Ccdc136Q3TVA9 1136 aa21.62■■□□□ 1.05
Chfr-201ENSMUST00000014812 Pcgf6Q99NA9 353 aa21.42■■□□□ 1.02
Chfr-201ENSMUST00000014812 Zcchc6Q5BLK4 1491 aaKnown RBP21.36■■□□□ 1.01
Chfr-201ENSMUST00000014812 HrcG5E8J6 738 aa21.23■□□□□ 0.99
Chfr-201ENSMUST00000014812 Trim41Q5NCC3 630 aa21.15■□□□□ 0.98
Chfr-201ENSMUST00000014812 Supt5hO55201 1082 aaKnown RBP21.03■□□□□ 0.96
Chfr-201ENSMUST00000014812 Dcaf1Q80TR8 1506 aa20.99■□□□□ 0.95
Chfr-201ENSMUST00000014812 Zeb1Q64318 1117 aa20.86■□□□□ 0.93
Chfr-201ENSMUST00000014812 Gab3Q8BSM5 595 aa20.78■□□□□ 0.92
Chfr-201ENSMUST00000014812 Neurod1Q60867 357 aa20.65■□□□□ 0.9
Chfr-201ENSMUST00000014812 Rb1cc1Q9ESK9 1588 aa20.64■□□□□ 0.9
Chfr-201ENSMUST00000014812 Cngb1E1AZ71 1325 aa20.6■□□□□ 0.89
Chfr-201ENSMUST00000014812 Chic1Q8CBW7 227 aa20.38■□□□□ 0.85
Chfr-201ENSMUST00000014812 Cep164Q5DU05 1446 aa20.37■□□□□ 0.85
Chfr-201ENSMUST00000014812 Mier1Q5UAK0 511 aa20.35■□□□□ 0.85
Chfr-201ENSMUST00000014812 Sall2Q9QX96 1004 aa20.31■□□□□ 0.84
Chfr-201ENSMUST00000014812 Baz1aO88379 1555 aa20.29■□□□□ 0.84
Chfr-201ENSMUST00000014812 NefmP08553 848 aa20.25■□□□□ 0.83
Chfr-201ENSMUST00000014812 Wdr66E9Q743 1299 aa20.25■□□□□ 0.83
Chfr-201ENSMUST00000014812 ScribQ80U72 1612 aa20.25■□□□□ 0.83
Chfr-201ENSMUST00000014812 Ppargc1bQ8VHJ7 1014 aa20.22■□□□□ 0.83
Chfr-201ENSMUST00000014812 Las1lA2BE28 776 aaKnown RBP20.2■□□□□ 0.82
Chfr-201ENSMUST00000014812 Kdm5dQ62240 1548 aa20.14■□□□□ 0.81
Chfr-201ENSMUST00000014812 UbtfP25976 765 aaKnown RBP20.14■□□□□ 0.81
Chfr-201ENSMUST00000014812 Rsf1E9PWW9 1441 aaKnown RBP20.1■□□□□ 0.81
Chfr-201ENSMUST00000014812 Csrnp3P59055 597 aa20.06■□□□□ 0.8
Chfr-201ENSMUST00000014812 Esf1Q3V1V3 845 aaKnown RBP20.05■□□□□ 0.8
Chfr-201ENSMUST00000014812 1700123L14RikQ3V2K7 440 aa19.98■□□□□ 0.79
Chfr-201ENSMUST00000014812 Aebp2Q9Z248 504 aaKnown RBP19.94■□□□□ 0.78
Chfr-201ENSMUST00000014812 Ccdc88bQ4QRL3 1481 aa19.9■□□□□ 0.78
Chfr-201ENSMUST00000014812 Myt1lP97500 1187 aa19.89■□□□□ 0.78
Chfr-201ENSMUST00000014812 Anks4bQ8K3X6 423 aa19.87■□□□□ 0.77
Chfr-201ENSMUST00000014812 Gm38655A0A286YDK6 273 aa19.85■□□□□ 0.77
Chfr-201ENSMUST00000014812 NacadQ5SWP3 1504 aa19.83■□□□□ 0.77
Chfr-201ENSMUST00000014812 Cdk11bP24788 784 aaKnown RBP19.83■□□□□ 0.76
Chfr-201ENSMUST00000014812 Nop58Q6DFW4 536 aaKnown RBP19.82■□□□□ 0.76
Chfr-201ENSMUST00000014812 Smarca2Q6DIC0 1577 aa19.81■□□□□ 0.76
Chfr-201ENSMUST00000014812 Brd4Q9ESU6 1400 aaKnown RBP19.67■□□□□ 0.74
Chfr-201ENSMUST00000014812 ClspnQ80YR7 1315 aa19.63■□□□□ 0.73
Chfr-201ENSMUST00000014812 Golga3P55937 1487 aa19.63■□□□□ 0.73
Chfr-201ENSMUST00000014812 Cecr2E9Q2Z1 1453 aa19.59■□□□□ 0.73
Chfr-201ENSMUST00000014812 Npm2Q80W85 207 aa19.58■□□□□ 0.72
Chfr-201ENSMUST00000014812 TonslQ6NZL6 1363 aa19.55■□□□□ 0.72
Chfr-201ENSMUST00000014812 CenpbP27790 599 aa19.55■□□□□ 0.72
Chfr-201ENSMUST00000014812 Plekhg3Q4VAC9 1341 aa19.54■□□□□ 0.72
Chfr-201ENSMUST00000014812 Crybg2B7ZCC2 1516 aa19.5■□□□□ 0.71
Chfr-201ENSMUST00000014812 Aplp2Q06335 707 aa19.45■□□□□ 0.7
Chfr-201ENSMUST00000014812 Eid3Q3V124 375 aa19.41■□□□□ 0.7
Chfr-201ENSMUST00000014812 Synj1Q8CHC4 1574 aa19.39■□□□□ 0.69
Chfr-201ENSMUST00000014812 Mapk8ip2Q9ERE9 830 aa19.38■□□□□ 0.69
Chfr-201ENSMUST00000014812 Sycp2Q9CUU3 1500 aa19.37■□□□□ 0.69
Chfr-201ENSMUST00000014812 Ap3b1Q9Z1T1 1105 aa19.33■□□□□ 0.69
Chfr-201ENSMUST00000014812 SafbD3YXK2 937 aaKnown RBP19.25■□□□□ 0.67
Chfr-201ENSMUST00000014812 Clip1Q922J3 1391 aa19.24■□□□□ 0.67
Chfr-201ENSMUST00000014812 CftrP26361 1476 aa19.22■□□□□ 0.67
Chfr-201ENSMUST00000014812 Hnrnpul2Q00PI9 745 aaKnown RBP19.19■□□□□ 0.66
Chfr-201ENSMUST00000014812 Cep162Q6ZQ06 1403 aa19.15■□□□□ 0.66
Chfr-201ENSMUST00000014812 Rapgef2Q8CHG7 1496 aa19.13■□□□□ 0.65
Chfr-201ENSMUST00000014812 Il27Q8K3I6 234 aa19.11■□□□□ 0.65
Chfr-201ENSMUST00000014812 Fam71e1A1L3C1 212 aa19.11■□□□□ 0.65
Chfr-201ENSMUST00000014812 Myt1Q8CFC2 1127 aa19.1■□□□□ 0.65
Chfr-201ENSMUST00000014812 Cc2d2aQ8CFW7 1633 aa19.06■□□□□ 0.64
Chfr-201ENSMUST00000014812 Slc24a1Q91WD8 1130 aa19.01■□□□□ 0.63
Chfr-201ENSMUST00000014812 Fam50aQ9WV03 339 aaKnown RBP19.01■□□□□ 0.63
Chfr-201ENSMUST00000014812 NclP09405 707 aaKnown RBP18.99■□□□□ 0.63
Chfr-201ENSMUST00000014812 Top2bQ64511 1612 aa18.98■□□□□ 0.63
Chfr-201ENSMUST00000014812 Tnnt3Q9QZ47 272 aa18.96■□□□□ 0.63
Chfr-201ENSMUST00000014812 Fmn1Q05860 1466 aa18.92■□□□□ 0.62
Chfr-201ENSMUST00000014812 Lmod2Q3UHZ5 550 aa18.87■□□□□ 0.61
Chfr-201ENSMUST00000014812 BicraF8VPZ9 1578 aa18.87■□□□□ 0.61
Chfr-201ENSMUST00000014812 Cttnbp2B9EJA2 1648 aa18.85■□□□□ 0.61
Chfr-201ENSMUST00000014812 Ncapd3Q6ZQK0 1506 aa18.84■□□□□ 0.61
Chfr-201ENSMUST00000014812 Top2aQ01320 1528 aaKnown RBP18.84■□□□□ 0.61
Chfr-201ENSMUST00000014812 Ube2uB1AUC4 352 aa18.83■□□□□ 0.6
Chfr-201ENSMUST00000014812 DiexfQ8BTT6 772 aaKnown RBP18.8■□□□□ 0.6
Chfr-201ENSMUST00000014812 Setd5Q5XJV7 1441 aa18.78■□□□□ 0.6
Chfr-201ENSMUST00000014812 Stra8P70278 393 aa18.73■□□□□ 0.59
Chfr-201ENSMUST00000014812 Eea1Q8BL66 1411 aa18.73■□□□□ 0.59
Chfr-201ENSMUST00000014812 Anp32aO35381 247 aa18.72■□□□□ 0.59
Chfr-201ENSMUST00000014812 Eif5bQ05D44 1216 aaKnown RBP18.71■□□□□ 0.59
Chfr-201ENSMUST00000014812 BlmO88700 1416 aa18.71■□□□□ 0.58
Chfr-201ENSMUST00000014812 Bcl11aQ9QYE3 773 aa18.67■□□□□ 0.58
Chfr-201ENSMUST00000014812 Hspa5P20029 655 aaKnown RBP18.67■□□□□ 0.58
Chfr-201ENSMUST00000014812 Znf710Q3U288 666 aa18.66■□□□□ 0.58
Chfr-201ENSMUST00000014812 Smarca4Q3TKT4 1613 aaKnown RBP18.66■□□□□ 0.58
Chfr-201ENSMUST00000014812 Calr4Q3TQS0 420 aa18.66■□□□□ 0.58
Chfr-201ENSMUST00000014812 Arap1Q4LDD4 1452 aa18.65■□□□□ 0.58
Chfr-201ENSMUST00000014812 Nolc1E9Q5C9 702 aaKnown RBP18.6■□□□□ 0.57
Chfr-201ENSMUST00000014812 PtprkP35822 1457 aa18.6■□□□□ 0.57
Chfr-201ENSMUST00000014812 Sin3aQ60520 1274 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms