RNA–Protein interactions for RNA: ENSMUST00000012580.12

Hps3-201, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hps3, Length 4,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-201ENSMUST00000012580 Rhox8Q6VSS7 320 aa22.59■■□□□ 1.21
Hps3-201ENSMUST00000012580 NischQ80TM9 1593 aa21.95■■□□□ 1.1
Hps3-201ENSMUST00000012580 Ehmt2Q9Z148 1263 aaKnown RBP21.11■□□□□ 0.97
Hps3-201ENSMUST00000012580 Abcc9P70170 1546 aa20.91■□□□□ 0.94
Hps3-201ENSMUST00000012580 Ccdc136Q3TVA9 1136 aa20.74■□□□□ 0.91
Hps3-201ENSMUST00000012580 Rpgrip1Q9EPQ2 1331 aa20.47■□□□□ 0.87
Hps3-201ENSMUST00000012580 Abcc8B2RUS7 1588 aa20.46■□□□□ 0.87
Hps3-201ENSMUST00000012580 Gm35339A0A140LHH9 1649 aa20.24■□□□□ 0.83
Hps3-201ENSMUST00000012580 Ccdc180J3QNE4 1664 aa20.22■□□□□ 0.83
Hps3-201ENSMUST00000012580 Trim41Q5NCC3 630 aa20.1■□□□□ 0.81
Hps3-201ENSMUST00000012580 Acin1Q9JIX8 1338 aaKnown RBP20.1■□□□□ 0.81
Hps3-201ENSMUST00000012580 Rtl1Q7M732 1744 aa20.09■□□□□ 0.81
Hps3-201ENSMUST00000012580 Gab3Q8BSM5 595 aa19.98■□□□□ 0.79
Hps3-201ENSMUST00000012580 Cngb1E1AZ71 1325 aa19.9■□□□□ 0.78
Hps3-201ENSMUST00000012580 HrcG5E8J6 738 aa19.77■□□□□ 0.76
Hps3-201ENSMUST00000012580 Zeb1Q64318 1117 aa19.74■□□□□ 0.75
Hps3-201ENSMUST00000012580 Pcgf6Q99NA9 353 aa19.67■□□□□ 0.74
Hps3-201ENSMUST00000012580 Esf1Q3V1V3 845 aaKnown RBP19.54■□□□□ 0.72
Hps3-201ENSMUST00000012580 Zcchc6Q5BLK4 1491 aaKnown RBP19.5■□□□□ 0.71
Hps3-201ENSMUST00000012580 Supt5hO55201 1082 aaKnown RBP19.42■□□□□ 0.7
Hps3-201ENSMUST00000012580 Wdr66E9Q743 1299 aa19.32■□□□□ 0.68
Hps3-201ENSMUST00000012580 Dcaf1Q80TR8 1506 aa19.28■□□□□ 0.68
Hps3-201ENSMUST00000012580 Rb1cc1Q9ESK9 1588 aa19.27■□□□□ 0.68
Hps3-201ENSMUST00000012580 Myt1lP97500 1187 aa19.26■□□□□ 0.67
Hps3-201ENSMUST00000012580 UbtfP25976 765 aaKnown RBP19.22■□□□□ 0.67
Hps3-201ENSMUST00000012580 Chic1Q8CBW7 227 aa19.16■□□□□ 0.66
Hps3-201ENSMUST00000012580 Ppargc1bQ8VHJ7 1014 aa19.13■□□□□ 0.65
Hps3-201ENSMUST00000012580 Las1lA2BE28 776 aaKnown RBP19.09■□□□□ 0.65
Hps3-201ENSMUST00000012580 Mier1Q5UAK0 511 aa19.04■□□□□ 0.64
Hps3-201ENSMUST00000012580 Npm2Q80W85 207 aa19.02■□□□□ 0.64
Hps3-201ENSMUST00000012580 NefmP08553 848 aa19■□□□□ 0.63
Hps3-201ENSMUST00000012580 Cep164Q5DU05 1446 aa18.91■□□□□ 0.62
Hps3-201ENSMUST00000012580 Neurod1Q60867 357 aa18.89■□□□□ 0.61
Hps3-201ENSMUST00000012580 Baz1aO88379 1555 aa18.86■□□□□ 0.61
Hps3-201ENSMUST00000012580 Kdm5dQ62240 1548 aa18.82■□□□□ 0.6
Hps3-201ENSMUST00000012580 Sall2Q9QX96 1004 aa18.78■□□□□ 0.6
Hps3-201ENSMUST00000012580 ScribQ80U72 1612 aa18.73■□□□□ 0.59
Hps3-201ENSMUST00000012580 Rsf1E9PWW9 1441 aaKnown RBP18.68■□□□□ 0.58
Hps3-201ENSMUST00000012580 Il27Q8K3I6 234 aa18.67■□□□□ 0.58
Hps3-201ENSMUST00000012580 NacadQ5SWP3 1504 aa18.66■□□□□ 0.58
Hps3-201ENSMUST00000012580 Ap3b1Q9Z1T1 1105 aa18.65■□□□□ 0.58
Hps3-201ENSMUST00000012580 CenpbP27790 599 aa18.6■□□□□ 0.57
Hps3-201ENSMUST00000012580 Plekhg3Q4VAC9 1341 aa18.6■□□□□ 0.57
Hps3-201ENSMUST00000012580 Brd4Q9ESU6 1400 aaKnown RBP18.56■□□□□ 0.56
Hps3-201ENSMUST00000012580 Cdk11bP24788 784 aaKnown RBP18.56■□□□□ 0.56
Hps3-201ENSMUST00000012580 Nop58Q6DFW4 536 aaKnown RBP18.54■□□□□ 0.56
Hps3-201ENSMUST00000012580 Ccdc88bQ4QRL3 1481 aa18.51■□□□□ 0.55
Hps3-201ENSMUST00000012580 DiexfQ8BTT6 772 aaKnown RBP18.49■□□□□ 0.55
Hps3-201ENSMUST00000012580 Aebp2Q9Z248 504 aaKnown RBP18.47■□□□□ 0.55
Hps3-201ENSMUST00000012580 Ube2uB1AUC4 352 aa18.46■□□□□ 0.55
Hps3-201ENSMUST00000012580 Gm38655A0A286YDK6 273 aa18.45■□□□□ 0.54
Hps3-201ENSMUST00000012580 Csrnp3P59055 597 aa18.43■□□□□ 0.54
Hps3-201ENSMUST00000012580 TonslQ6NZL6 1363 aa18.42■□□□□ 0.54
Hps3-201ENSMUST00000012580 Eid3Q3V124 375 aa18.41■□□□□ 0.54
Hps3-201ENSMUST00000012580 Golga3P55937 1487 aa18.37■□□□□ 0.53
Hps3-201ENSMUST00000012580 Myt1Q8CFC2 1127 aa18.37■□□□□ 0.53
Hps3-201ENSMUST00000012580 Mapk8ip2Q9ERE9 830 aa18.37■□□□□ 0.53
Hps3-201ENSMUST00000012580 Fam50aQ9WV03 339 aaKnown RBP18.31■□□□□ 0.52
Hps3-201ENSMUST00000012580 Cecr2E9Q2Z1 1453 aa18.31■□□□□ 0.52
Hps3-201ENSMUST00000012580 ClspnQ80YR7 1315 aa18.28■□□□□ 0.52
Hps3-201ENSMUST00000012580 Smarca2Q6DIC0 1577 aa18.28■□□□□ 0.52
Hps3-201ENSMUST00000012580 Slc24a1Q91WD8 1130 aa18.27■□□□□ 0.52
Hps3-201ENSMUST00000012580 Clip1Q922J3 1391 aa18.21■□□□□ 0.51
Hps3-201ENSMUST00000012580 Anks4bQ8K3X6 423 aa18.21■□□□□ 0.51
Hps3-201ENSMUST00000012580 Lmod2Q3UHZ5 550 aa18.2■□□□□ 0.5
Hps3-201ENSMUST00000012580 1700123L14RikQ3V2K7 440 aa18.15■□□□□ 0.5
Hps3-201ENSMUST00000012580 NclP09405 707 aaKnown RBP18.14■□□□□ 0.49
Hps3-201ENSMUST00000012580 Sycp2Q9CUU3 1500 aa18.13■□□□□ 0.49
Hps3-201ENSMUST00000012580 Synj1Q8CHC4 1574 aa18.04■□□□□ 0.48
Hps3-201ENSMUST00000012580 Crybg2B7ZCC2 1516 aa18.03■□□□□ 0.48
Hps3-201ENSMUST00000012580 CftrP26361 1476 aa17.96■□□□□ 0.47
Hps3-201ENSMUST00000012580 Amer1Q7TS75 1132 aa17.94■□□□□ 0.46
Hps3-201ENSMUST00000012580 Cep162Q6ZQ06 1403 aa17.88■□□□□ 0.45
Hps3-201ENSMUST00000012580 Eif5bQ05D44 1216 aaKnown RBP17.85■□□□□ 0.45
Hps3-201ENSMUST00000012580 Bcl11aQ9QYE3 773 aa17.85■□□□□ 0.45
Hps3-201ENSMUST00000012580 Rapgef2Q8CHG7 1496 aa17.83■□□□□ 0.44
Hps3-201ENSMUST00000012580 Setd5Q5XJV7 1441 aa17.8■□□□□ 0.44
Hps3-201ENSMUST00000012580 Aplp2Q06335 707 aa17.79■□□□□ 0.44
Hps3-201ENSMUST00000012580 BlmO88700 1416 aa17.77■□□□□ 0.44
Hps3-201ENSMUST00000012580 SafbD3YXK2 937 aaKnown RBP17.76■□□□□ 0.43
Hps3-201ENSMUST00000012580 Stra8P70278 393 aa17.76■□□□□ 0.43
Hps3-201ENSMUST00000012580 Npm1Q61937 292 aaKnown RBP17.76■□□□□ 0.43
Hps3-201ENSMUST00000012580 Tnnt3Q9QZ47 272 aa17.75■□□□□ 0.43
Hps3-201ENSMUST00000012580 Hnrnpul2Q00PI9 745 aaKnown RBP17.71■□□□□ 0.43
Hps3-201ENSMUST00000012580 Fmn1Q05860 1466 aa17.71■□□□□ 0.43
Hps3-201ENSMUST00000012580 Chic2Q9D9G3 165 aa17.7■□□□□ 0.42
Hps3-201ENSMUST00000012580 Kif15Q6P9L6 1387 aa17.66■□□□□ 0.42
Hps3-201ENSMUST00000012580 Cc2d2aQ8CFW7 1633 aa17.65■□□□□ 0.42
Hps3-201ENSMUST00000012580 Eea1Q8BL66 1411 aa17.65■□□□□ 0.42
Hps3-201ENSMUST00000012580 Ttbk1Q6PCN3 1308 aa17.58■□□□□ 0.4
Hps3-201ENSMUST00000012580 Zbtb7cQ8VCZ7 619 aa17.57■□□□□ 0.4
Hps3-201ENSMUST00000012580 Hspa5P20029 655 aaKnown RBP17.56■□□□□ 0.4
Hps3-201ENSMUST00000012580 Fam71e1A1L3C1 212 aa17.56■□□□□ 0.4
Hps3-201ENSMUST00000012580 Cttnbp2B9EJA2 1648 aa17.54■□□□□ 0.4
Hps3-201ENSMUST00000012580 NrdcQ8BHG1 1161 aa17.54■□□□□ 0.4
Hps3-201ENSMUST00000012580 Ubl4bQ9CQ84 188 aa17.54■□□□□ 0.4
Hps3-201ENSMUST00000012580 Zbtb4Q5F293 982 aa17.53■□□□□ 0.4
Hps3-201ENSMUST00000012580 BicraF8VPZ9 1578 aa17.51■□□□□ 0.39
Hps3-201ENSMUST00000012580 Pelp1Q9DBD5 1123 aaKnown RBP17.5■□□□□ 0.39
Hps3-201ENSMUST00000012580 Smarca4Q3TKT4 1613 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms