RNA–Protein interactions for RNA: ENSMUST00000005532.8

Nid1-201, Transcript of Nidogen-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nid1, Length 6,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1-201ENSMUST00000005532 Rhox8Q6VSS7 320 aa26.52■■□□□ 1.84
Nid1-201ENSMUST00000005532 Rpgrip1Q9EPQ2 1331 aa25.11■■□□□ 1.61
Nid1-201ENSMUST00000005532 Ehmt2Q9Z148 1263 aaKnown RBP24.42■■□□□ 1.5
Nid1-201ENSMUST00000005532 Las1lA2BE28 776 aaKnown RBP24.38■■□□□ 1.49
Nid1-201ENSMUST00000005532 Cngb1E1AZ71 1325 aa24.32■■□□□ 1.48
Nid1-201ENSMUST00000005532 Wdr66E9Q743 1299 aa23.9■■□□□ 1.42
Nid1-201ENSMUST00000005532 Pelp1Q9DBD5 1123 aaKnown RBP23.84■■□□□ 1.41
Nid1-201ENSMUST00000005532 Zeb1Q64318 1117 aa23.63■■□□□ 1.37
Nid1-201ENSMUST00000005532 Ccdc136Q3TVA9 1136 aa23.43■■□□□ 1.34
Nid1-201ENSMUST00000005532 Ube2uB1AUC4 352 aa23.28■■□□□ 1.32
Nid1-201ENSMUST00000005532 Esf1Q3V1V3 845 aaKnown RBP23.22■■□□□ 1.31
Nid1-201ENSMUST00000005532 Gab3Q8BSM5 595 aa23.19■■□□□ 1.3
Nid1-201ENSMUST00000005532 CenpbP27790 599 aa23.19■■□□□ 1.3
Nid1-201ENSMUST00000005532 Amer1Q7TS75 1132 aa23.09■■□□□ 1.29
Nid1-201ENSMUST00000005532 Acin1Q9JIX8 1338 aaKnown RBP23.05■■□□□ 1.28
Nid1-201ENSMUST00000005532 Npm2Q80W85 207 aa22.91■■□□□ 1.26
Nid1-201ENSMUST00000005532 Trim41Q5NCC3 630 aa22.91■■□□□ 1.26
Nid1-201ENSMUST00000005532 Myt1lP97500 1187 aa22.78■■□□□ 1.24
Nid1-201ENSMUST00000005532 NefmP08553 848 aa22.76■■□□□ 1.23
Nid1-201ENSMUST00000005532 Stra8P70278 393 aa22.66■■□□□ 1.22
Nid1-201ENSMUST00000005532 UbtfP25976 765 aaKnown RBP22.54■■□□□ 1.2
Nid1-201ENSMUST00000005532 Slc24a1Q91WD8 1130 aa22.51■■□□□ 1.19
Nid1-201ENSMUST00000005532 Myt1Q8CFC2 1127 aa22.42■■□□□ 1.18
Nid1-201ENSMUST00000005532 Cdk11bP24788 784 aaKnown RBP22.4■■□□□ 1.18
Nid1-201ENSMUST00000005532 NischQ80TM9 1593 aa22.38■■□□□ 1.17
Nid1-201ENSMUST00000005532 Pcgf6Q99NA9 353 aa22.38■■□□□ 1.17
Nid1-201ENSMUST00000005532 Ttbk1Q6PCN3 1308 aa22.34■■□□□ 1.17
Nid1-201ENSMUST00000005532 Ccdc180J3QNE4 1664 aa22.3■■□□□ 1.16
Nid1-201ENSMUST00000005532 4933416C03RikQ3V063 378 aa22.18■■□□□ 1.14
Nid1-201ENSMUST00000005532 4930567H17RikQ3V0K5 233 aa22.18■■□□□ 1.14
Nid1-201ENSMUST00000005532 Tnnt3Q9QZ47 272 aa22.14■■□□□ 1.13
Nid1-201ENSMUST00000005532 Nop58Q6DFW4 536 aaKnown RBP22.09■■□□□ 1.13
Nid1-201ENSMUST00000005532 HrcG5E8J6 738 aa22.04■■□□□ 1.12
Nid1-201ENSMUST00000005532 Rtl1Q7M732 1744 aa21.98■■□□□ 1.11
Nid1-201ENSMUST00000005532 NrdcQ8BHG1 1161 aa21.96■■□□□ 1.11
Nid1-201ENSMUST00000005532 Supt5hO55201 1082 aaKnown RBP21.92■■□□□ 1.1
Nid1-201ENSMUST00000005532 Eif5bQ05D44 1216 aaKnown RBP21.89■■□□□ 1.1
Nid1-201ENSMUST00000005532 NeflP08551 543 aa21.87■■□□□ 1.09
Nid1-201ENSMUST00000005532 Ppargc1bQ8VHJ7 1014 aa21.84■■□□□ 1.09
Nid1-201ENSMUST00000005532 NclP09405 707 aaKnown RBP21.81■■□□□ 1.08
Nid1-201ENSMUST00000005532 Anp32bQ9EST5 272 aaKnown RBP21.8■■□□□ 1.08
Nid1-201ENSMUST00000005532 Rtl5Q5DTT4 599 aa21.77■■□□□ 1.08
Nid1-201ENSMUST00000005532 Neurod1Q60867 357 aa21.73■■□□□ 1.07
Nid1-201ENSMUST00000005532 Fam50aQ9WV03 339 aaKnown RBP21.71■■□□□ 1.07
Nid1-201ENSMUST00000005532 TonslQ6NZL6 1363 aa21.67■■□□□ 1.06
Nid1-201ENSMUST00000005532 Ap3b1Q9Z1T1 1105 aa21.66■■□□□ 1.06
Nid1-201ENSMUST00000005532 Il27Q8K3I6 234 aa21.63■■□□□ 1.05
Nid1-201ENSMUST00000005532 DiexfQ8BTT6 772 aaKnown RBP21.55■■□□□ 1.04
Nid1-201ENSMUST00000005532 Mier1Q5UAK0 511 aa21.47■■□□□ 1.03
Nid1-201ENSMUST00000005532 Os9Q8K2C7 672 aa21.43■■□□□ 1.02
Nid1-201ENSMUST00000005532 Anp32aO35381 247 aa21.4■■□□□ 1.02
Nid1-201ENSMUST00000005532 ClspnQ80YR7 1315 aa21.31■■□□□ 1
Nid1-201ENSMUST00000005532 DaxxO35613 739 aa21.27■■□□□ 1
Nid1-201ENSMUST00000005532 Zcchc6Q5BLK4 1491 aaKnown RBP21.26■□□□□ 0.99
Nid1-201ENSMUST00000005532 Gm38655A0A286YDK6 273 aa21.12■□□□□ 0.97
Nid1-201ENSMUST00000005532 Csrnp3P59055 597 aa21.07■□□□□ 0.96
Nid1-201ENSMUST00000005532 Anks4bQ8K3X6 423 aa21.03■□□□□ 0.96
Nid1-201ENSMUST00000005532 Plekhg3Q4VAC9 1341 aa20.97■□□□□ 0.95
Nid1-201ENSMUST00000005532 Mapk8ip2Q9ERE9 830 aa20.94■□□□□ 0.94
Nid1-201ENSMUST00000005532 Aplp2Q06335 707 aa20.94■□□□□ 0.94
Nid1-201ENSMUST00000005532 Lmod2Q3UHZ5 550 aa20.92■□□□□ 0.94
Nid1-201ENSMUST00000005532 Sall2Q9QX96 1004 aa20.92■□□□□ 0.94
Nid1-201ENSMUST00000005532 Zbtb7cQ8VCZ7 619 aa20.9■□□□□ 0.94
Nid1-201ENSMUST00000005532 Nlrp6Q91WS2 869 aa20.84■□□□□ 0.93
Nid1-201ENSMUST00000005532 ArxO35085 564 aa20.83■□□□□ 0.93
Nid1-201ENSMUST00000005532 Zbtb4Q5F293 982 aa20.79■□□□□ 0.92
Nid1-201ENSMUST00000005532 Polr3glQ8R0C0 218 aa20.77■□□□□ 0.92
Nid1-201ENSMUST00000005532 Hnrnpul2Q00PI9 745 aaKnown RBP20.75■□□□□ 0.91
Nid1-201ENSMUST00000005532 Calr4Q3TQS0 420 aa20.74■□□□□ 0.91
Nid1-201ENSMUST00000005532 Ppp4r2Q0VGB7 417 aa20.74■□□□□ 0.91
Nid1-201ENSMUST00000005532 Eid3Q3V124 375 aa20.72■□□□□ 0.91
Nid1-201ENSMUST00000005532 Chic1Q8CBW7 227 aa20.72■□□□□ 0.91
Nid1-201ENSMUST00000005532 Abcc9P70170 1546 aa20.7■□□□□ 0.9
Nid1-201ENSMUST00000005532 Dcaf1Q80TR8 1506 aa20.7■□□□□ 0.9
Nid1-201ENSMUST00000005532 Gm35339A0A140LHH9 1649 aa20.68■□□□□ 0.9
Nid1-201ENSMUST00000005532 Prdm10Q3UTQ7 1184 aa20.61■□□□□ 0.89
Nid1-201ENSMUST00000005532 Erich6D3Z6S9 713 aa20.6■□□□□ 0.89
Nid1-201ENSMUST00000005532 Hsp90aa1P07901 733 aaKnown RBP20.57■□□□□ 0.88
Nid1-201ENSMUST00000005532 Npm1Q61937 292 aaKnown RBP20.56■□□□□ 0.88
Nid1-201ENSMUST00000005532 Upf2A2AT37 1269 aaKnown RBP20.55■□□□□ 0.88
Nid1-201ENSMUST00000005532 Wdr43Q6ZQL4 677 aaKnown RBP20.54■□□□□ 0.88
Nid1-201ENSMUST00000005532 CatipB9EKE5 520 aa20.54■□□□□ 0.88
Nid1-201ENSMUST00000005532 Clip1Q922J3 1391 aa20.52■□□□□ 0.88
Nid1-201ENSMUST00000005532 Gm13697A2AK42 830 aa20.51■□□□□ 0.87
Nid1-201ENSMUST00000005532 Atp1b4Q99ME6 356 aa20.5■□□□□ 0.87
Nid1-201ENSMUST00000005532 Ccdc9Q8VC31 543 aaKnown RBP20.48■□□□□ 0.87
Nid1-201ENSMUST00000005532 Cep164Q5DU05 1446 aa20.44■□□□□ 0.86
Nid1-201ENSMUST00000005532 Ccer2J3QPU5 274 aa20.43■□□□□ 0.86
Nid1-201ENSMUST00000005532 Hdac5Q9Z2V6 1113 aa20.43■□□□□ 0.86
Nid1-201ENSMUST00000005532 Rad21Q61550 635 aaKnown RBP20.41■□□□□ 0.86
Nid1-201ENSMUST00000005532 Lmod3E9QA62 571 aa20.39■□□□□ 0.86
Nid1-201ENSMUST00000005532 Ythdc1E9Q5K9 736 aaKnown RBP20.39■□□□□ 0.85
Nid1-201ENSMUST00000005532 DekQ7TNV0 380 aaKnown RBP20.35■□□□□ 0.85
Nid1-201ENSMUST00000005532 Rangap1P46061 589 aaKnown RBP20.35■□□□□ 0.85
Nid1-201ENSMUST00000005532 1700123L14RikQ3V2K7 440 aa20.35■□□□□ 0.85
Nid1-201ENSMUST00000005532 Ifnlr1Q8CGK5 535 aa20.35■□□□□ 0.85
Nid1-201ENSMUST00000005532 Mrs2Q5NCE8 434 aa20.35■□□□□ 0.85
Nid1-201ENSMUST00000005532 Fam71e1A1L3C1 212 aa20.33■□□□□ 0.85
Nid1-201ENSMUST00000005532 Vsig10D3YX43 558 aa20.28■□□□□ 0.84
Nid1-201ENSMUST00000005532 Trim44Q9QXA7 346 aa20.27■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms