RNA–Protein interactions for RNA: ENSMUST00000004201.7

Col5a3-201, Transcript of Collagen type V alpha 3 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a3, Length 6,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a3-201ENSMUST00000004201 Rhox8Q6VSS7 320 aa25.4■■□□□ 1.66
Col5a3-201ENSMUST00000004201 Rpgrip1Q9EPQ2 1331 aa23.71■■□□□ 1.39
Col5a3-201ENSMUST00000004201 Cngb1E1AZ71 1325 aa23.3■■□□□ 1.32
Col5a3-201ENSMUST00000004201 Las1lA2BE28 776 aaKnown RBP23.29■■□□□ 1.32
Col5a3-201ENSMUST00000004201 Ehmt2Q9Z148 1263 aaKnown RBP23.07■■□□□ 1.28
Col5a3-201ENSMUST00000004201 Pelp1Q9DBD5 1123 aaKnown RBP22.88■■□□□ 1.25
Col5a3-201ENSMUST00000004201 Wdr66E9Q743 1299 aa22.68■■□□□ 1.22
Col5a3-201ENSMUST00000004201 Ccdc136Q3TVA9 1136 aa22.46■■□□□ 1.19
Col5a3-201ENSMUST00000004201 Esf1Q3V1V3 845 aaKnown RBP22.37■■□□□ 1.17
Col5a3-201ENSMUST00000004201 Zeb1Q64318 1117 aa22.36■■□□□ 1.17
Col5a3-201ENSMUST00000004201 Amer1Q7TS75 1132 aa22.32■■□□□ 1.16
Col5a3-201ENSMUST00000004201 Ube2uB1AUC4 352 aa22.25■■□□□ 1.15
Col5a3-201ENSMUST00000004201 Gab3Q8BSM5 595 aa22.16■■□□□ 1.14
Col5a3-201ENSMUST00000004201 CenpbP27790 599 aa22.12■■□□□ 1.13
Col5a3-201ENSMUST00000004201 Npm2Q80W85 207 aa21.96■■□□□ 1.11
Col5a3-201ENSMUST00000004201 Trim41Q5NCC3 630 aa21.84■■□□□ 1.09
Col5a3-201ENSMUST00000004201 Myt1lP97500 1187 aa21.82■■□□□ 1.08
Col5a3-201ENSMUST00000004201 NischQ80TM9 1593 aa21.67■■□□□ 1.06
Col5a3-201ENSMUST00000004201 Acin1Q9JIX8 1338 aaKnown RBP21.58■■□□□ 1.05
Col5a3-201ENSMUST00000004201 4930567H17RikQ3V0K5 233 aa21.51■■□□□ 1.03
Col5a3-201ENSMUST00000004201 Stra8P70278 393 aa21.49■■□□□ 1.03
Col5a3-201ENSMUST00000004201 Ttbk1Q6PCN3 1308 aa21.46■■□□□ 1.03
Col5a3-201ENSMUST00000004201 Myt1Q8CFC2 1127 aa21.4■■□□□ 1.02
Col5a3-201ENSMUST00000004201 NefmP08553 848 aa21.38■■□□□ 1.01
Col5a3-201ENSMUST00000004201 UbtfP25976 765 aaKnown RBP21.38■■□□□ 1.01
Col5a3-201ENSMUST00000004201 Slc24a1Q91WD8 1130 aa21.38■■□□□ 1.01
Col5a3-201ENSMUST00000004201 4933416C03RikQ3V063 378 aa21.27■■□□□ 1
Col5a3-201ENSMUST00000004201 Cdk11bP24788 784 aaKnown RBP21.17■□□□□ 0.98
Col5a3-201ENSMUST00000004201 Pcgf6Q99NA9 353 aa21.03■□□□□ 0.96
Col5a3-201ENSMUST00000004201 Tnnt3Q9QZ47 272 aa20.96■□□□□ 0.95
Col5a3-201ENSMUST00000004201 Il27Q8K3I6 234 aa20.96■□□□□ 0.95
Col5a3-201ENSMUST00000004201 Nop58Q6DFW4 536 aaKnown RBP20.85■□□□□ 0.93
Col5a3-201ENSMUST00000004201 Ccdc180J3QNE4 1664 aa20.82■□□□□ 0.92
Col5a3-201ENSMUST00000004201 NeflP08551 543 aa20.79■□□□□ 0.92
Col5a3-201ENSMUST00000004201 NrdcQ8BHG1 1161 aa20.79■□□□□ 0.92
Col5a3-201ENSMUST00000004201 Eif5bQ05D44 1216 aaKnown RBP20.76■□□□□ 0.91
Col5a3-201ENSMUST00000004201 Ap3b1Q9Z1T1 1105 aa20.75■□□□□ 0.91
Col5a3-201ENSMUST00000004201 HrcG5E8J6 738 aa20.74■□□□□ 0.91
Col5a3-201ENSMUST00000004201 Fam50aQ9WV03 339 aaKnown RBP20.72■□□□□ 0.91
Col5a3-201ENSMUST00000004201 Neurod1Q60867 357 aa20.72■□□□□ 0.91
Col5a3-201ENSMUST00000004201 Rtl5Q5DTT4 599 aa20.71■□□□□ 0.91
Col5a3-201ENSMUST00000004201 DiexfQ8BTT6 772 aaKnown RBP20.67■□□□□ 0.9
Col5a3-201ENSMUST00000004201 Anp32bQ9EST5 272 aaKnown RBP20.65■□□□□ 0.9
Col5a3-201ENSMUST00000004201 Ppargc1bQ8VHJ7 1014 aa20.64■□□□□ 0.89
Col5a3-201ENSMUST00000004201 NclP09405 707 aaKnown RBP20.62■□□□□ 0.89
Col5a3-201ENSMUST00000004201 Rtl1Q7M732 1744 aa20.58■□□□□ 0.88
Col5a3-201ENSMUST00000004201 Supt5hO55201 1082 aaKnown RBP20.57■□□□□ 0.88
Col5a3-201ENSMUST00000004201 Os9Q8K2C7 672 aa20.54■□□□□ 0.88
Col5a3-201ENSMUST00000004201 Zcchc6Q5BLK4 1491 aaKnown RBP20.48■□□□□ 0.87
Col5a3-201ENSMUST00000004201 TonslQ6NZL6 1363 aa20.36■□□□□ 0.85
Col5a3-201ENSMUST00000004201 DaxxO35613 739 aa20.31■□□□□ 0.84
Col5a3-201ENSMUST00000004201 Anp32aO35381 247 aa20.27■□□□□ 0.84
Col5a3-201ENSMUST00000004201 Abcc9P70170 1546 aa20.26■□□□□ 0.83
Col5a3-201ENSMUST00000004201 Gm35339A0A140LHH9 1649 aa20.2■□□□□ 0.82
Col5a3-201ENSMUST00000004201 Mier1Q5UAK0 511 aa20.18■□□□□ 0.82
Col5a3-201ENSMUST00000004201 Zbtb7cQ8VCZ7 619 aa20.16■□□□□ 0.82
Col5a3-201ENSMUST00000004201 Lmod2Q3UHZ5 550 aa20.08■□□□□ 0.8
Col5a3-201ENSMUST00000004201 Plekhg3Q4VAC9 1341 aa19.99■□□□□ 0.79
Col5a3-201ENSMUST00000004201 ClspnQ80YR7 1315 aa19.98■□□□□ 0.79
Col5a3-201ENSMUST00000004201 Hnrnpul2Q00PI9 745 aaKnown RBP19.98■□□□□ 0.79
Col5a3-201ENSMUST00000004201 Gm38655A0A286YDK6 273 aa19.97■□□□□ 0.79
Col5a3-201ENSMUST00000004201 Chic1Q8CBW7 227 aa19.96■□□□□ 0.79
Col5a3-201ENSMUST00000004201 Zbtb4Q5F293 982 aa19.92■□□□□ 0.78
Col5a3-201ENSMUST00000004201 Npm1Q61937 292 aaKnown RBP19.92■□□□□ 0.78
Col5a3-201ENSMUST00000004201 Gm13697A2AK42 830 aa19.88■□□□□ 0.77
Col5a3-201ENSMUST00000004201 Csrnp3P59055 597 aa19.85■□□□□ 0.77
Col5a3-201ENSMUST00000004201 Ifnlr1Q8CGK5 535 aa19.85■□□□□ 0.77
Col5a3-201ENSMUST00000004201 ArxO35085 564 aa19.83■□□□□ 0.77
Col5a3-201ENSMUST00000004201 Mapk8ip2Q9ERE9 830 aa19.81■□□□□ 0.76
Col5a3-201ENSMUST00000004201 Erich6D3Z6S9 713 aa19.8■□□□□ 0.76
Col5a3-201ENSMUST00000004201 CatipB9EKE5 520 aa19.8■□□□□ 0.76
Col5a3-201ENSMUST00000004201 Nlrp6Q91WS2 869 aa19.77■□□□□ 0.76
Col5a3-201ENSMUST00000004201 Prdm10Q3UTQ7 1184 aa19.77■□□□□ 0.75
Col5a3-201ENSMUST00000004201 Anks4bQ8K3X6 423 aa19.76■□□□□ 0.75
Col5a3-201ENSMUST00000004201 Atp1b4Q99ME6 356 aa19.75■□□□□ 0.75
Col5a3-201ENSMUST00000004201 Aplp2Q06335 707 aa19.74■□□□□ 0.75
Col5a3-201ENSMUST00000004201 Polr3glQ8R0C0 218 aa19.72■□□□□ 0.75
Col5a3-201ENSMUST00000004201 Ythdc1E9Q5K9 736 aaKnown RBP19.71■□□□□ 0.75
Col5a3-201ENSMUST00000004201 Eid3Q3V124 375 aa19.68■□□□□ 0.74
Col5a3-201ENSMUST00000004201 Upf2A2AT37 1269 aaKnown RBP19.65■□□□□ 0.74
Col5a3-201ENSMUST00000004201 Abcc8B2RUS7 1588 aa19.63■□□□□ 0.73
Col5a3-201ENSMUST00000004201 Lmod3E9QA62 571 aa19.62■□□□□ 0.73
Col5a3-201ENSMUST00000004201 Ppp4r2Q0VGB7 417 aa19.6■□□□□ 0.73
Col5a3-201ENSMUST00000004201 Fkbp15Q6P9Q6 1216 aaKnown RBP19.57■□□□□ 0.72
Col5a3-201ENSMUST00000004201 Sall2Q9QX96 1004 aa19.56■□□□□ 0.72
Col5a3-201ENSMUST00000004201 Calr4Q3TQS0 420 aa19.56■□□□□ 0.72
Col5a3-201ENSMUST00000004201 Hsp90aa1P07901 733 aaKnown RBP19.55■□□□□ 0.72
Col5a3-201ENSMUST00000004201 Gm13695A2AK44 830 aa19.54■□□□□ 0.72
Col5a3-201ENSMUST00000004201 Plppr3Q7TPB0 716 aa19.51■□□□□ 0.71
Col5a3-201ENSMUST00000004201 Clip1Q922J3 1391 aa19.51■□□□□ 0.71
Col5a3-201ENSMUST00000004201 Ccdc9Q8VC31 543 aaKnown RBP19.48■□□□□ 0.71
Col5a3-201ENSMUST00000004201 Rangap1P46061 589 aaKnown RBP19.48■□□□□ 0.71
Col5a3-201ENSMUST00000004201 Hdac5Q9Z2V6 1113 aa19.41■□□□□ 0.7
Col5a3-201ENSMUST00000004201 Wdr43Q6ZQL4 677 aaKnown RBP19.4■□□□□ 0.7
Col5a3-201ENSMUST00000004201 DekQ7TNV0 380 aaKnown RBP19.38■□□□□ 0.69
Col5a3-201ENSMUST00000004201 Brd4Q9ESU6 1400 aaKnown RBP19.37■□□□□ 0.69
Col5a3-201ENSMUST00000004201 Trim44Q9QXA7 346 aa19.34■□□□□ 0.69
Col5a3-201ENSMUST00000004201 Vsig10D3YX43 558 aa19.33■□□□□ 0.68
Col5a3-201ENSMUST00000004201 Rad21Q61550 635 aaKnown RBP19.31■□□□□ 0.68
Col5a3-201ENSMUST00000004201 Chic2Q9D9G3 165 aa19.29■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms