RNA–Protein interactions for RNA: ENSMUST00000001522.9

Def8-201, Transcript of Differentially expressed in FDCP 8, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Def8, Length 3,214 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Def8-201ENSMUST00000001522 NischQ80TM9 1593 aa16.75■□□□□ 0.27
Def8-201ENSMUST00000001522 Abcc9P70170 1546 aa16.23■□□□□ 0.19
Def8-201ENSMUST00000001522 Gm35339A0A140LHH9 1649 aa16.22■□□□□ 0.19
Def8-201ENSMUST00000001522 Rhox8Q6VSS7 320 aa15.91■□□□□ 0.14
Def8-201ENSMUST00000001522 Abcc8B2RUS7 1588 aa15.85■□□□□ 0.13
Def8-201ENSMUST00000001522 Rtl1Q7M732 1744 aa15.46■□□□□ 0.07
Def8-201ENSMUST00000001522 Ccdc180J3QNE4 1664 aa15.32■□□□□ 0.04
Def8-201ENSMUST00000001522 Zcchc6Q5BLK4 1491 aaKnown RBP15.09■□□□□ 0.01
Def8-201ENSMUST00000001522 Ehmt2Q9Z148 1263 aaKnown RBP14.88□□□□□ -0.03
Def8-201ENSMUST00000001522 Rpgrip1Q9EPQ2 1331 aa14.83□□□□□ -0.04
Def8-201ENSMUST00000001522 Ccdc136Q3TVA9 1136 aa14.81□□□□□ -0.04
Def8-201ENSMUST00000001522 Acin1Q9JIX8 1338 aaKnown RBP14.72□□□□□ -0.05
Def8-201ENSMUST00000001522 ScribQ80U72 1612 aa14.72□□□□□ -0.05
Def8-201ENSMUST00000001522 Rb1cc1Q9ESK9 1588 aa14.69□□□□□ -0.06
Def8-201ENSMUST00000001522 HrcG5E8J6 738 aa14.65□□□□□ -0.06
Def8-201ENSMUST00000001522 Dcaf1Q80TR8 1506 aa14.65□□□□□ -0.06
Def8-201ENSMUST00000001522 Baz1aO88379 1555 aa14.48□□□□□ -0.09
Def8-201ENSMUST00000001522 Kdm5dQ62240 1548 aa14.48□□□□□ -0.09
Def8-201ENSMUST00000001522 Trim41Q5NCC3 630 aa14.46□□□□□ -0.09
Def8-201ENSMUST00000001522 Pcgf6Q99NA9 353 aa14.32□□□□□ -0.12
Def8-201ENSMUST00000001522 NacadQ5SWP3 1504 aa14.25□□□□□ -0.13
Def8-201ENSMUST00000001522 Smarca2Q6DIC0 1577 aa14.18□□□□□ -0.14
Def8-201ENSMUST00000001522 Cep164Q5DU05 1446 aa14.17□□□□□ -0.14
Def8-201ENSMUST00000001522 Chic1Q8CBW7 227 aa14.12□□□□□ -0.15
Def8-201ENSMUST00000001522 Supt5hO55201 1082 aaKnown RBP14.1□□□□□ -0.15
Def8-201ENSMUST00000001522 Gab3Q8BSM5 595 aa14.1□□□□□ -0.15
Def8-201ENSMUST00000001522 Cngb1E1AZ71 1325 aa14.08□□□□□ -0.15
Def8-201ENSMUST00000001522 Crybg2B7ZCC2 1516 aa14.05□□□□□ -0.16
Def8-201ENSMUST00000001522 Rsf1E9PWW9 1441 aaKnown RBP14.05□□□□□ -0.16
Def8-201ENSMUST00000001522 Sycp2Q9CUU3 1500 aa13.96□□□□□ -0.17
Def8-201ENSMUST00000001522 Cecr2E9Q2Z1 1453 aa13.95□□□□□ -0.18
Def8-201ENSMUST00000001522 Ccdc88bQ4QRL3 1481 aa13.95□□□□□ -0.18
Def8-201ENSMUST00000001522 Zeb1Q64318 1117 aa13.89□□□□□ -0.19
Def8-201ENSMUST00000001522 Brd4Q9ESU6 1400 aaKnown RBP13.84□□□□□ -0.19
Def8-201ENSMUST00000001522 Mier1Q5UAK0 511 aa13.84□□□□□ -0.19
Def8-201ENSMUST00000001522 Golga3P55937 1487 aa13.81□□□□□ -0.2
Def8-201ENSMUST00000001522 Synj1Q8CHC4 1574 aa13.81□□□□□ -0.2
Def8-201ENSMUST00000001522 Neurod1Q60867 357 aa13.79□□□□□ -0.2
Def8-201ENSMUST00000001522 Esf1Q3V1V3 845 aaKnown RBP13.74□□□□□ -0.21
Def8-201ENSMUST00000001522 BicraF8VPZ9 1578 aa13.7□□□□□ -0.22
Def8-201ENSMUST00000001522 Sall2Q9QX96 1004 aa13.69□□□□□ -0.22
Def8-201ENSMUST00000001522 NefmP08553 848 aa13.68□□□□□ -0.22
Def8-201ENSMUST00000001522 CftrP26361 1476 aa13.66□□□□□ -0.22
Def8-201ENSMUST00000001522 UbtfP25976 765 aaKnown RBP13.62□□□□□ -0.23
Def8-201ENSMUST00000001522 Top2bQ64511 1612 aa13.6□□□□□ -0.23
Def8-201ENSMUST00000001522 Cc2d2aQ8CFW7 1633 aa13.56□□□□□ -0.24
Def8-201ENSMUST00000001522 Aebp2Q9Z248 504 aaKnown RBP13.52□□□□□ -0.24
Def8-201ENSMUST00000001522 Myt1lP97500 1187 aa13.5□□□□□ -0.25
Def8-201ENSMUST00000001522 Ppargc1bQ8VHJ7 1014 aa13.49□□□□□ -0.25
Def8-201ENSMUST00000001522 Cttnbp2B9EJA2 1648 aa13.49□□□□□ -0.25
Def8-201ENSMUST00000001522 Rapgef2Q8CHG7 1496 aa13.47□□□□□ -0.25
Def8-201ENSMUST00000001522 Wdr66E9Q743 1299 aa13.45□□□□□ -0.26
Def8-201ENSMUST00000001522 Cep162Q6ZQ06 1403 aa13.39□□□□□ -0.27
Def8-201ENSMUST00000001522 Smarca4Q3TKT4 1613 aaKnown RBP13.39□□□□□ -0.27
Def8-201ENSMUST00000001522 Top2aQ01320 1528 aaKnown RBP13.38□□□□□ -0.27
Def8-201ENSMUST00000001522 Fmn1Q05860 1466 aa13.36□□□□□ -0.27
Def8-201ENSMUST00000001522 Las1lA2BE28 776 aaKnown RBP13.36□□□□□ -0.27
Def8-201ENSMUST00000001522 Csrnp3P59055 597 aa13.35□□□□□ -0.27
Def8-201ENSMUST00000001522 Plekhg3Q4VAC9 1341 aa13.35□□□□□ -0.27
Def8-201ENSMUST00000001522 Npm2Q80W85 207 aa13.34□□□□□ -0.27
Def8-201ENSMUST00000001522 Anks4bQ8K3X6 423 aa13.33□□□□□ -0.28
Def8-201ENSMUST00000001522 1700123L14RikQ3V2K7 440 aa13.3□□□□□ -0.28
Def8-201ENSMUST00000001522 ClspnQ80YR7 1315 aa13.27□□□□□ -0.29
Def8-201ENSMUST00000001522 Clip1Q922J3 1391 aa13.26□□□□□ -0.29
Def8-201ENSMUST00000001522 TonslQ6NZL6 1363 aa13.24□□□□□ -0.29
Def8-201ENSMUST00000001522 Nop58Q6DFW4 536 aaKnown RBP13.24□□□□□ -0.29
Def8-201ENSMUST00000001522 Iqgap2Q3UQ44 1575 aa13.22□□□□□ -0.29
Def8-201ENSMUST00000001522 Cdk11bP24788 784 aaKnown RBP13.22□□□□□ -0.29
Def8-201ENSMUST00000001522 Eif4g1Q6NZJ6 1600 aaKnown RBP13.19□□□□□ -0.3
Def8-201ENSMUST00000001522 Ap3b1Q9Z1T1 1105 aa13.18□□□□□ -0.3
Def8-201ENSMUST00000001522 Ncapd3Q6ZQK0 1506 aa13.17□□□□□ -0.3
Def8-201ENSMUST00000001522 PtprkP35822 1457 aa13.15□□□□□ -0.3
Def8-201ENSMUST00000001522 Eid3Q3V124 375 aa13.15□□□□□ -0.31
Def8-201ENSMUST00000001522 Gm38655A0A286YDK6 273 aa13.13□□□□□ -0.31
Def8-201ENSMUST00000001522 Il27Q8K3I6 234 aa13.12□□□□□ -0.31
Def8-201ENSMUST00000001522 Arhgap35Q91YM2 1499 aa13.12□□□□□ -0.31
Def8-201ENSMUST00000001522 Arap1Q4LDD4 1452 aa13.09□□□□□ -0.31
Def8-201ENSMUST00000001522 TnnQ80Z71 1560 aa13.06□□□□□ -0.32
Def8-201ENSMUST00000001522 Atad2bE9Q166 1460 aaKnown RBP13.05□□□□□ -0.32
Def8-201ENSMUST00000001522 Eea1Q8BL66 1411 aa13.01□□□□□ -0.33
Def8-201ENSMUST00000001522 Kdm5bQ80Y84 1544 aa13□□□□□ -0.33
Def8-201ENSMUST00000001522 Setd5Q5XJV7 1441 aa13□□□□□ -0.33
Def8-201ENSMUST00000001522 Mapk8ip2Q9ERE9 830 aa13□□□□□ -0.33
Def8-201ENSMUST00000001522 NrkQ9R0G8 1455 aa12.99□□□□□ -0.33
Def8-201ENSMUST00000001522 Frmpd1A2AKB4 1549 aa12.98□□□□□ -0.33
Def8-201ENSMUST00000001522 Aplp2Q06335 707 aa12.98□□□□□ -0.33
Def8-201ENSMUST00000001522 Arhgef5E9Q7D5 1581 aa12.97□□□□□ -0.33
Def8-201ENSMUST00000001522 AqrQ8CFQ3 1481 aaKnown RBP12.95□□□□□ -0.34
Def8-201ENSMUST00000001522 Kif15Q6P9L6 1387 aa12.95□□□□□ -0.34
Def8-201ENSMUST00000001522 Pds5bQ4VA53 1446 aaKnown RBP12.92□□□□□ -0.34
Def8-201ENSMUST00000001522 Shroom4Q1W617 1475 aa12.92□□□□□ -0.34
Def8-201ENSMUST00000001522 Lamc3Q9R0B6 1581 aa12.9□□□□□ -0.34
Def8-201ENSMUST00000001522 Wdr62Q3U3T8 1523 aa12.9□□□□□ -0.34
Def8-201ENSMUST00000001522 Ccdc18Q640L5 1455 aa12.9□□□□□ -0.34
Def8-201ENSMUST00000001522 Hnrnpul2Q00PI9 745 aaKnown RBP12.9□□□□□ -0.34
Def8-201ENSMUST00000001522 BlmO88700 1416 aa12.89□□□□□ -0.35
Def8-201ENSMUST00000001522 Lmod2Q3UHZ5 550 aa12.88□□□□□ -0.35
Def8-201ENSMUST00000001522 SafbD3YXK2 937 aaKnown RBP12.88□□□□□ -0.35
Def8-201ENSMUST00000001522 Fam50aQ9WV03 339 aaKnown RBP12.88□□□□□ -0.35
Def8-201ENSMUST00000001522 Naip1Q9QWK5 1403 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms