RNA–Protein interactions for RNA: ENSMUST00000001181.12

Col6a2-201, Transcript of Collagen alpha-2(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a2, Length 3,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-201ENSMUST00000001181 Rhox8Q6VSS7 320 aa20.62■□□□□ 0.89
Col6a2-201ENSMUST00000001181 Rpgrip1Q9EPQ2 1331 aa20.55■□□□□ 0.88
Col6a2-201ENSMUST00000001181 Ehmt2Q9Z148 1263 aaKnown RBP20.22■□□□□ 0.83
Col6a2-201ENSMUST00000001181 Acin1Q9JIX8 1338 aaKnown RBP19.75■□□□□ 0.75
Col6a2-201ENSMUST00000001181 Pcgf6Q99NA9 353 aa19.67■□□□□ 0.74
Col6a2-201ENSMUST00000001181 Las1lA2BE28 776 aaKnown RBP19.32■□□□□ 0.68
Col6a2-201ENSMUST00000001181 NischQ80TM9 1593 aa19.26■□□□□ 0.67
Col6a2-201ENSMUST00000001181 Supt5hO55201 1082 aaKnown RBP19.16■□□□□ 0.66
Col6a2-201ENSMUST00000001181 Zeb1Q64318 1117 aa19.15■□□□□ 0.66
Col6a2-201ENSMUST00000001181 Ccdc180J3QNE4 1664 aa19.04■□□□□ 0.64
Col6a2-201ENSMUST00000001181 Neurod1Q60867 357 aa18.97■□□□□ 0.63
Col6a2-201ENSMUST00000001181 Ccdc136Q3TVA9 1136 aa18.81■□□□□ 0.6
Col6a2-201ENSMUST00000001181 Rtl1Q7M732 1744 aa18.8■□□□□ 0.6
Col6a2-201ENSMUST00000001181 Cngb1E1AZ71 1325 aa18.74■□□□□ 0.59
Col6a2-201ENSMUST00000001181 CenpbP27790 599 aa18.7■□□□□ 0.58
Col6a2-201ENSMUST00000001181 Wdr66E9Q743 1299 aa18.69■□□□□ 0.58
Col6a2-201ENSMUST00000001181 Trim41Q5NCC3 630 aa18.58■□□□□ 0.57
Col6a2-201ENSMUST00000001181 HrcG5E8J6 738 aa18.53■□□□□ 0.56
Col6a2-201ENSMUST00000001181 Csrnp3P59055 597 aa18.53■□□□□ 0.56
Col6a2-201ENSMUST00000001181 1700123L14RikQ3V2K7 440 aa18.48■□□□□ 0.55
Col6a2-201ENSMUST00000001181 Myt1Q8CFC2 1127 aa18.43■□□□□ 0.54
Col6a2-201ENSMUST00000001181 Gab3Q8BSM5 595 aa18.4■□□□□ 0.54
Col6a2-201ENSMUST00000001181 DiexfQ8BTT6 772 aaKnown RBP18.39■□□□□ 0.53
Col6a2-201ENSMUST00000001181 Gm38655A0A286YDK6 273 aa18.37■□□□□ 0.53
Col6a2-201ENSMUST00000001181 NefmP08553 848 aa18.36■□□□□ 0.53
Col6a2-201ENSMUST00000001181 Ppargc1bQ8VHJ7 1014 aa18.36■□□□□ 0.53
Col6a2-201ENSMUST00000001181 Abcc9P70170 1546 aa18.34■□□□□ 0.53
Col6a2-201ENSMUST00000001181 Dcaf1Q80TR8 1506 aa18.34■□□□□ 0.53
Col6a2-201ENSMUST00000001181 Sall2Q9QX96 1004 aa18.32■□□□□ 0.52
Col6a2-201ENSMUST00000001181 Cdk11bP24788 784 aaKnown RBP18.3■□□□□ 0.52
Col6a2-201ENSMUST00000001181 Anks4bQ8K3X6 423 aa18.26■□□□□ 0.51
Col6a2-201ENSMUST00000001181 Nop58Q6DFW4 536 aaKnown RBP18.21■□□□□ 0.51
Col6a2-201ENSMUST00000001181 Mier1Q5UAK0 511 aa18.1■□□□□ 0.49
Col6a2-201ENSMUST00000001181 Aplp2Q06335 707 aa18.05■□□□□ 0.48
Col6a2-201ENSMUST00000001181 UbtfP25976 765 aaKnown RBP18■□□□□ 0.47
Col6a2-201ENSMUST00000001181 Bcl11aQ9QYE3 773 aa17.88■□□□□ 0.45
Col6a2-201ENSMUST00000001181 Zcchc6Q5BLK4 1491 aaKnown RBP17.84■□□□□ 0.45
Col6a2-201ENSMUST00000001181 Mapk8ip2Q9ERE9 830 aa17.77■□□□□ 0.44
Col6a2-201ENSMUST00000001181 Ttbk1Q6PCN3 1308 aa17.77■□□□□ 0.43
Col6a2-201ENSMUST00000001181 Aebp2Q9Z248 504 aaKnown RBP17.77■□□□□ 0.43
Col6a2-201ENSMUST00000001181 Abcc8B2RUS7 1588 aa17.75■□□□□ 0.43
Col6a2-201ENSMUST00000001181 Pelp1Q9DBD5 1123 aaKnown RBP17.74■□□□□ 0.43
Col6a2-201ENSMUST00000001181 ClspnQ80YR7 1315 aa17.74■□□□□ 0.43
Col6a2-201ENSMUST00000001181 Esf1Q3V1V3 845 aaKnown RBP17.73■□□□□ 0.43
Col6a2-201ENSMUST00000001181 Fam71e1A1L3C1 212 aa17.72■□□□□ 0.43
Col6a2-201ENSMUST00000001181 Amer1Q7TS75 1132 aa17.68■□□□□ 0.42
Col6a2-201ENSMUST00000001181 Myt1lP97500 1187 aa17.61■□□□□ 0.41
Col6a2-201ENSMUST00000001181 Tnnt3Q9QZ47 272 aa17.58■□□□□ 0.41
Col6a2-201ENSMUST00000001181 TonslQ6NZL6 1363 aa17.55■□□□□ 0.4
Col6a2-201ENSMUST00000001181 SafbD3YXK2 937 aaKnown RBP17.55■□□□□ 0.4
Col6a2-201ENSMUST00000001181 Ap3b1Q9Z1T1 1105 aa17.52■□□□□ 0.4
Col6a2-201ENSMUST00000001181 Slc24a1Q91WD8 1130 aa17.52■□□□□ 0.39
Col6a2-201ENSMUST00000001181 Cep164Q5DU05 1446 aa17.5■□□□□ 0.39
Col6a2-201ENSMUST00000001181 Chic1Q8CBW7 227 aa17.45■□□□□ 0.38
Col6a2-201ENSMUST00000001181 PrkcshO08795 521 aa17.44■□□□□ 0.38
Col6a2-201ENSMUST00000001181 Anp32aO35381 247 aa17.42■□□□□ 0.38
Col6a2-201ENSMUST00000001181 Hnrnpul2Q00PI9 745 aaKnown RBP17.41■□□□□ 0.38
Col6a2-201ENSMUST00000001181 Gm35339A0A140LHH9 1649 aa17.41■□□□□ 0.38
Col6a2-201ENSMUST00000001181 Ifnlr1Q8CGK5 535 aa17.33■□□□□ 0.37
Col6a2-201ENSMUST00000001181 Stra8P70278 393 aa17.33■□□□□ 0.36
Col6a2-201ENSMUST00000001181 Rtl5Q5DTT4 599 aa17.27■□□□□ 0.36
Col6a2-201ENSMUST00000001181 Npm2Q80W85 207 aa17.27■□□□□ 0.35
Col6a2-201ENSMUST00000001181 Eif5bQ05D44 1216 aaKnown RBP17.23■□□□□ 0.35
Col6a2-201ENSMUST00000001181 Eid3Q3V124 375 aa17.23■□□□□ 0.35
Col6a2-201ENSMUST00000001181 NclP09405 707 aaKnown RBP17.13■□□□□ 0.33
Col6a2-201ENSMUST00000001181 Plekhg3Q4VAC9 1341 aa17.12■□□□□ 0.33
Col6a2-201ENSMUST00000001181 Calr4Q3TQS0 420 aa17.11■□□□□ 0.33
Col6a2-201ENSMUST00000001181 4933416C03RikQ3V063 378 aa17.09■□□□□ 0.33
Col6a2-201ENSMUST00000001181 Ube2uB1AUC4 352 aa17.06■□□□□ 0.32
Col6a2-201ENSMUST00000001181 Ppp4r2Q0VGB7 417 aa17.06■□□□□ 0.32
Col6a2-201ENSMUST00000001181 Rsf1E9PWW9 1441 aaKnown RBP17■□□□□ 0.31
Col6a2-201ENSMUST00000001181 Il27Q8K3I6 234 aa16.96■□□□□ 0.31
Col6a2-201ENSMUST00000001181 Rb1cc1Q9ESK9 1588 aa16.96■□□□□ 0.3
Col6a2-201ENSMUST00000001181 Nolc1E9Q5C9 702 aaKnown RBP16.93■□□□□ 0.3
Col6a2-201ENSMUST00000001181 Fam50aQ9WV03 339 aaKnown RBP16.9■□□□□ 0.3
Col6a2-201ENSMUST00000001181 Wdr43Q6ZQL4 677 aaKnown RBP16.89■□□□□ 0.29
Col6a2-201ENSMUST00000001181 DaxxO35613 739 aa16.87■□□□□ 0.29
Col6a2-201ENSMUST00000001181 Supt16hQ920B9 1047 aa16.86■□□□□ 0.29
Col6a2-201ENSMUST00000001181 Hdac5Q9Z2V6 1113 aa16.83■□□□□ 0.29
Col6a2-201ENSMUST00000001181 NrdcQ8BHG1 1161 aa16.78■□□□□ 0.28
Col6a2-201ENSMUST00000001181 P3h3Q8CG70 732 aa16.75■□□□□ 0.27
Col6a2-201ENSMUST00000001181 Ccdc88bQ4QRL3 1481 aa16.74■□□□□ 0.27
Col6a2-201ENSMUST00000001181 Ccdc27Q3V036 639 aa16.71■□□□□ 0.27
Col6a2-201ENSMUST00000001181 Clip1Q922J3 1391 aa16.71■□□□□ 0.26
Col6a2-201ENSMUST00000001181 Upf2A2AT37 1269 aaKnown RBP16.67■□□□□ 0.26
Col6a2-201ENSMUST00000001181 Hsp90aa1P07901 733 aaKnown RBP16.67■□□□□ 0.26
Col6a2-201ENSMUST00000001181 Slc4a3P16283 1227 aa16.65■□□□□ 0.26
Col6a2-201ENSMUST00000001181 Irx3P81067 507 aa16.65■□□□□ 0.26
Col6a2-201ENSMUST00000001181 Gtf3c3Q3TMP1 882 aa16.63■□□□□ 0.25
Col6a2-201ENSMUST00000001181 Baz1aO88379 1555 aa16.61■□□□□ 0.25
Col6a2-201ENSMUST00000001181 Znf710Q3U288 666 aa16.61■□□□□ 0.25
Col6a2-201ENSMUST00000001181 Plcd4Q8K3R3 807 aa16.59■□□□□ 0.25
Col6a2-201ENSMUST00000001181 Mrs2Q5NCE8 434 aa16.56■□□□□ 0.24
Col6a2-201ENSMUST00000001181 Ccdc9Q8VC31 543 aaKnown RBP16.54■□□□□ 0.24
Col6a2-201ENSMUST00000001181 Lmod2Q3UHZ5 550 aa16.52■□□□□ 0.23
Col6a2-201ENSMUST00000001181 Pknox2Q8BG99 474 aa16.51■□□□□ 0.23
Col6a2-201ENSMUST00000001181 Brd4Q9ESU6 1400 aaKnown RBP16.51■□□□□ 0.23
Col6a2-201ENSMUST00000001181 Pak3Q61036 559 aa16.51■□□□□ 0.23
Col6a2-201ENSMUST00000001181 NeflP08551 543 aa16.51■□□□□ 0.23
Col6a2-201ENSMUST00000001181 Golga3P55937 1487 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms