RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ARNTP27540 789 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 AOAHP28039 575 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 PPARGP37231 505 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-208ENST00000469802 PTGIRP43119 386 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 TTPAP49638 278 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 RAB28P51157 221 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 CSE1LP55060 971 aaKnown RBP15.73■□□□□ 0.11
COL9A3-208ENST00000469802 SESN2P58004 480 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-208ENST00000469802 CRADDP78560 199 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 KYNUQ16719 465 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 DEFB110Q30KQ9 67 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 FAM69BQ5VUD6 431 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 PAPD7Q5XG87 772 aaKnown RBP15.73■□□□□ 0.11
COL9A3-208ENST00000469802 UNC5DQ6UXZ4 953 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 ASB18Q6ZVZ8 466 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 DCUN1D3Q8IWE4 304 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 LINC01555Q8NAE3 123 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 TSSK1BQ9BXA7 367 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 P2RY12Q9H244 342 aa15.73■□□□□ 0.11
COL9A3-208ENST00000469802 ARGFXA6NJG6 315 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 CD3EAPO15446 510 aaKnown RBP15.72■□□□□ 0.11
COL9A3-208ENST00000469802 APOA4P06727 396 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 TPSB2P20231 275 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 RPS3P23396 243 aaKnown RBP eCLIP15.72■□□□□ 0.113e-14■□□□□ 10.8
COL9A3-208ENST00000469802 NMBRP28336 390 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 BASP1P80723 227 aaKnown RBP15.72■□□□□ 0.11
COL9A3-208ENST00000469802 CCZ1BP86790 482 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 CCZ1P86791 482 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-208ENST00000469802 HSPA14Q0VDF9 509 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 CHAF1BQ13112 559 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 TPSAB1Q15661 275 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 RHBDD2Q6NTF9 364 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 HOOK3Q86VS8 718 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 LRRC8AQ8IWT6 810 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 KRT222Q8N1A0 295 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 MAIP1Q8WWC4 291 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 GBP5Q96PP8 586 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 DHRS4Q9BTZ2 278 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 KIFC1Q9BW19 673 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 ING2Q9H160 280 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 MRM3Q9HC36 420 aaKnown RBP15.72■□□□□ 0.11
COL9A3-208ENST00000469802 AP1M2Q9Y6Q5 423 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 LRRK2Q5S007 2527 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 SHANK1Q9Y566 2161 aa15.72■□□□□ 0.11
COL9A3-208ENST00000469802 CLEC18AA5D8T8 446 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 AP3B1O00203 1094 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 KLF7O75840 302 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-208ENST00000469802 OR2B3O76000 313 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 RPN2P04844 631 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 CTSBP07858 339 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 GCGRP47871 477 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 KCNJ1P48048 391 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 NPY2RP49146 381 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 CDK16Q00536 496 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 IGFBP7Q16270 282 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 COLEC12Q5KU26 742 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 CLEC18BQ6UXF7 455 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 GPR135Q8IZ08 494 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 DNAJC22Q8N4W6 341 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 PRELID2Q8N945 189 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 CLEC18CQ8NCF0 446 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 PROKR1Q8TCW9 393 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 MIB2Q96AX9 1013 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 SYBUQ9NX95 663 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 BFARQ9NZS9 450 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 ANAPC5Q9UJX4 755 aa15.71■□□□□ 0.11
COL9A3-208ENST00000469802 COL12A1Q99715 3063 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 ISM1B1AKI9 464 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 C9J4A7 227 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 ZSCAN9O15535 394 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-208ENST00000469802 TMEM63AO94886 807 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 CBSLP0DN79 551 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 MAGP20916 626 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 CD9P21926 228 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 CBSP35520 551 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 MAGEA6P43360 314 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 CD97P48960 835 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 TMED2Q15363 201 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 TYSND1Q2T9J0 566 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 CTSL3PQ5NE16 218 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 LRRC8BQ6P9F7 803 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 LRRC6Q86X45 466 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 ZBTB2Q8N680 514 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 TEX19Q8NA77 164 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 OR2L8Q8NGY9 312 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 MFSD3Q96ES6 412 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 PANX3Q96QZ0 392 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 SLC25A23Q9BV35 468 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 SPRTNQ9H040 489 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-208ENST00000469802 ACSS2Q9NR19 701 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 ENAMQ9NRM1 1142 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 GNPTGQ9UJJ9 305 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 SRPK3Q9UPE1 567 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 PADI2Q9Y2J8 665 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 HEATR5BQ9P2D3 2071 aa15.7■□□□□ 0.1
COL9A3-208ENST00000469802 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-208ENST00000469802 TCRBV7S3A2A0A539 114 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 RASGRF2O14827 1237 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 CEP104O60308 925 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms