RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CCND2P30279 289 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 RYKP34925 604 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 COPB2P35606 906 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 TIMP3P35625 211 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 AARSP49588 968 aaKnown RBP eCLIP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 PRKAA2P54646 552 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 TBX4P57082 545 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 BRWD1-AS2P59051 145 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 PPIGQ13427 754 aaKnown RBP eCLIP3.12□□□□□ -1.911e-7■■□□□ 13.3
PTCD3-218ENST00000493430 FCN2Q15485 313 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 STXBP2Q15833 593 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 BMP2KLQ5H9B9 411 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 PPP6R3Q5H9R7 873 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CELF3Q5SZQ8 465 aaKnown RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 MARCH8Q5T0T0 291 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 GPATCH4Q5T3I0 446 aaKnown RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 DENND1BQ6P3S1 775 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 TMED8Q6PL24 325 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CASC1Q6TDU7 716 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CCNI2Q6ZMN8 369 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CENPQQ7L2Z9 268 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 ADGRD2Q7Z7M1 963 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CDR2LQ86X02 465 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 HERC6Q8IVU3 1022 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 MYOCDQ8IZQ8 938 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CACNA2D3Q8IZS8 1091 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CIARTQ8N365 385 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 METTL27Q8N6F8 245 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 DBF4BQ8NFT6 615 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 DMBX1Q8NFW5 382 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 DNAJB3Q8WWF6 145 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 HERVK_113Q902F9 699 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 SH3KBP1Q96B97 665 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 SDCCAG3Q96C92 435 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 NEK1Q96PY6 1258 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CRB3Q9BUF7 120 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 SLC26A6Q9BXS9 759 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CXCL16Q9H2A7 254 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 SAYSD1Q9NPB0 183 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 KCNS2Q9ULS6 477 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CDC14AQ9UNH5 594 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 GINS2Q9Y248 185 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 MRPL11Q9Y3B7 192 aaKnown RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 BDP1A6H8Y1 2624 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 ELP1O95163 1332 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 SPTBN5Q9NRC6 3674 aaKnown RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 IGLV3-22A0A075B6J6 115 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ERICH2A1L162 156 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 SMCO2A6NFE2 343 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 H3BQ06 376 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-218ENST00000493430 HIP1O00291 1037 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 NDUFS7O75251 213 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 TBX10O75333 385 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 PEX14O75381 377 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 EIF3JO75822 258 aaKnown RBP3.11□□□□□ -1.91
PTCD3-218ENST00000493430 VTNP04004 478 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 EDN1P05305 212 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 CHRM4P08173 479 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 WEE2P0C1S8 567 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 CALM1P0DP23 149 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 CALM2P0DP24 149 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 CALM3P0DP25 149 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 DNAJB1P25685 340 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 SERPINB3P29508 390 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 CD52P31358 61 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 HNRNPH1P31943 449 aaKnown RBP3.11□□□□□ -1.91
PTCD3-218ENST00000493430 HSPA4P34932 840 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ACTR2P61160 394 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 MGAT3Q09327 533 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 TRDNQ13061 729 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 PPFIA1Q13136 1202 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 CUL4BQ13620 913 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 BLMHQ13867 455 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 EFNB3Q15768 340 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 TIGD6Q17RP2 521 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 SOWAHAQ2M3V2 549 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 EDRF1Q3B7T1 1238 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 C14orf177Q52M58 125 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ESCO2Q56NI9 601 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 IRAK1BP1Q5VVH5 260 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 PSRC1Q6PGN9 363 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-218ENST00000493430 KRBA2Q6ZNG9 492 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 TOGARAM2Q6ZUX3 1019 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 DGLUCYQ7Z3D6 616 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 DSG4Q86SJ6 1040 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 SLC9B2Q86UD5 537 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 EXOC8Q8IYI6 725 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 PARP16Q8N5Y8 322 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ZNF485Q8NCK3 441 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 SVIPQ8NHG7 77 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 RUFY2Q8WXA3 655 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ATP6V0A1Q93050 837 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 RRP36Q96EU6 259 aaKnown RBP3.11□□□□□ -1.91
PTCD3-218ENST00000493430 SPZ1Q9BXG8 430 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 TWSG1Q9GZX9 223 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 GFRA4Q9GZZ7 299 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 UNC45AQ9H3U1 944 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ZNF696Q9H7X3 374 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ABCF3Q9NUQ8 709 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 WRAP73Q9P2S5 460 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms