RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TRIM51Q9BSJ1 452 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC32Q9BV29 185 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CELF4Q9BZC1 486 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 NYXQ9GZU5 481 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RACGAP1Q9H0H5 632 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 GHITMQ9H3K2 345 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PIGUQ9H490 435 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 XKR8Q9H6D3 395 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 POLR1BQ9H9Y6 1135 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLCO1B3Q9NPD5 702 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 AP5S1Q9NUS5 200 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PAK1IP1Q9NWT1 392 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRR13Q9NZ81 148 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUX4Q9UBX2 424 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SERPINB13Q9UIV8 391 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TINAGQ9UJW2 476 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RPS6KA6Q9UK32 745 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PCDHGB4Q9UN71 923 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PLCL2Q9UPR0 1127 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 BAIAP2Q9UQB8 552 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ERVK-19Q9WJR5 959 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RUVBL2Q9Y230 463 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 BTBD3Q9Y2F9 522 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMX2Q9Y320 296 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SNX13Q9Y5W8 968 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 IRAK3Q9Y616 596 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PREX2Q70Z35 1606 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ADGRB1O14514 1584 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ABCA8O94911 1581 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CNTNAP1P78357 1384 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRPM2O94759 1503 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CPS1P31327 1500 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ABCC1P33527 1531 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MYO5AQ9Y4I1 1855 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ADGRA2Q96PE1 1338 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAP3K4Q9Y6R4 1608 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM191CA6NGB0 347 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 I3L521 148 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 L7N2F9 121 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCNK1O00180 336 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRIM38O00635 465 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 STX16O14662 325 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TYROBPO43914 113 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HS6ST1O60243 411 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MRPS14O60783 128 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HUS1O60921 280 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 UGT2B11O75310 529 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM155BO75949 473 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCNB2O95067 398 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF205O95201 554 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SEC24AO95486 1093 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TSPAN12O95859 305 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ERBB2P04626 1255 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 EPHX1P07099 455 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 FABP1P07148 127 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 PROS1P07225 676 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HOXD4P09016 255 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HOXB7P09629 217 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM191BP0C7N4 346 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SMIM6P0DI80 62 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 COX4I1P13073 169 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATF2P15336 505 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 PNLIPP16233 465 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 IFNAR1P17181 557 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CYP2A7P20853 494 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 TGM2P21980 687 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ME2P23368 584 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 DNAJB1P25685 340 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 GCAP28676 217 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ADSSP30520 456 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CHRNA5P30532 468 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 UQCRC1P31930 480 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 RPA3P35244 121 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CAPGP40121 348 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CD79BP40259 229 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRKCIP41743 596 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAGEA4P43358 317 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 HTR3AP46098 478 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATP5OP48047 213 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARCN1P48444 511 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CEBPAP49715 358 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 VEGFCP49767 419 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 DNA2P51530 1060 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 EPHB1P54762 984 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CASP7P55210 303 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 KRTAP10-2P60368 255 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ERVFRD-1P60508 538 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 YBX1P67809 324 aaKnown RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 RBP5P82980 135 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 MPP1Q00013 466 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARID5AQ03989 594 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 PUDPQ08623 228 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 GRM1Q13255 1194 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 BFSP2Q13515 415 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 RFTN1Q14699 578 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 GRK1Q15835 563 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCNG2Q16589 344 aa4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 SETMARQ53H47 684 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P19-201ENST00000517578 XKR3Q5GH77 459 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms