RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	UBX5	Q06682	500 aa		11.09	□□□□□ -0.63
TIF6	YPR016C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.09	□□□□□ -0.63	not detected
TIF6	YPR016C	NBL1	Q3E7Y6	73 aa		11.09	□□□□□ -0.63
TIF6	YPR016C	HXK1	P04806	485 aa	Known RBP	11.08	□□□□□ -0.64
TIF6	YPR016C	RGP1	P16664	663 aa		11.08	□□□□□ -0.64
TIF6	YPR016C	ASF1	P32447	279 aa		11.08	□□□□□ -0.64
TIF6	YPR016C	FMS1	P50264	508 aa		11.08	□□□□□ -0.64
TIF6	YPR016C	APC11	Q12157	165 aa		11.08	□□□□□ -0.64
TIF6	YPR016C	KEX1	P09620	729 aa		11.07	□□□□□ -0.64
TIF6	YPR016C	SAM1	P10659	382 aa	Known RBP	11.07	□□□□□ -0.64
TIF6	YPR016C	FRS2	P15625	503 aa	Known RBP	11.07	□□□□□ -0.64
TIF6	YPR016C	PWP2	P25635	923 aa	Known RBP	11.07	□□□□□ -0.64
TIF6	YPR016C	SAS3	P34218	831 aa		11.07	□□□□□ -0.64
TIF6	YPR016C	NET1	P47035	1189 aa		11.07	□□□□□ -0.64
TIF6	YPR016C	RBA50	Q04418	439 aa		11.07	□□□□□ -0.64
TIF6	YPR016C	EIS1	Q05050	843 aa	Known RBP	11.07	□□□□□ -0.64
TIF6	YPR016C	ROX1	P25042	368 aa		11.06	□□□□□ -0.64
TIF6	YPR016C	IXR1	P33417	597 aa		11.06	□□□□□ -0.64
TIF6	YPR016C	CCT5	P40413	562 aa	Known RBP	11.06	□□□□□ -0.64
TIF6	YPR016C	BNI5	P53890	448 aa	Known RBP	11.06	□□□□□ -0.64
TIF6	YPR016C	TRS120	Q04183	1289 aa		11.06	□□□□□ -0.64
TIF6	YPR016C	TMA64	Q04600	565 aa	Known RBP	11.06	□□□□□ -0.64
TIF6	YPR016C	OXR1	Q08952	273 aa		11.06	□□□□□ -0.64
TIF6	YPR016C	THR4	P16120	514 aa	Known RBP	11.05	□□□□□ -0.64
TIF6	YPR016C	PAN5	P38787	379 aa		11.05	□□□□□ -0.64
TIF6	YPR016C	SNF7	P39929	240 aa	Known RBP	11.05	□□□□□ -0.64
TIF6	YPR016C	DSE4	P53753	1117 aa		11.05	□□□□□ -0.64
TIF6	YPR016C	YOR296W	Q08748	1289 aa		11.05	□□□□□ -0.64
TIF6	YPR016C	CFT2	Q12102	859 aa	Predicted RBP	11.05	□□□□□ -0.64
TIF6	YPR016C	TIP41	Q12199	356 aa		11.05	□□□□□ -0.64
TIF6	YPR016C	RKM4	Q12504	494 aa		11.05	□□□□□ -0.64
TIF6	YPR016C	PTC5	Q12511	572 aa		11.05	□□□□□ -0.64
TIF6	YPR016C	URA1	P28272	314 aa	Predicted RBP	11.04	□□□□□ -0.64
TIF6	YPR016C	ELM1	P32801	640 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	TGL1	P34163	548 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	DID4	P36108	232 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	ARL1	P38116	183 aa	Known RBP	11.04	□□□□□ -0.64
TIF6	YPR016C	SUL1	P38359	859 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	ETP1	P38748	585 aa	Known RBP	11.04	□□□□□ -0.64
TIF6	YPR016C	CIT3	P43635	486 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	YGR273C	P53329	174 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	RET3	P53600	189 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	FAR11	P53917	953 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	ALD6	P54115	500 aa	Known RBP	11.04	□□□□□ -0.64
TIF6	YPR016C	CSM3	Q04659	317 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	CST9	Q06032	482 aa		11.04	□□□□□ -0.64
TIF6	YPR016C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.03	□□□□□ -0.64	not detected
TIF6	YPR016C	VMA2	P16140	517 aa	Known RBP	11.03	□□□□□ -0.64
TIF6	YPR016C	UTR4	P32626	227 aa		11.03	□□□□□ -0.64
TIF6	YPR016C	ASH1	P34233	588 aa		11.03	□□□□□ -0.64
TIF6	YPR016C	APE3	P37302	537 aa	Known RBP	11.03	□□□□□ -0.64
TIF6	YPR016C	STT3	P39007	718 aa	Known RBP	11.03	□□□□□ -0.64
TIF6	YPR016C	RVS167	P39743	482 aa	Known RBP	11.03	□□□□□ -0.64
TIF6	YPR016C	SLK19	Q08581	821 aa	Known RBP	11.03	□□□□□ -0.64
TIF6	YPR016C	SHP1	P34223	423 aa		11.02	□□□□□ -0.65
TIF6	YPR016C	ERG7	P38604	731 aa		11.02	□□□□□ -0.65
TIF6	YPR016C	RSM25	P40496	264 aa		11.02	□□□□□ -0.65
TIF6	YPR016C	AIM33	Q04516	312 aa		11.02	□□□□□ -0.65
TIF6	YPR016C	AIM44	Q99299	758 aa		11.02	□□□□□ -0.65
TIF6	YPR016C	TUF1	P02992	437 aa	Known RBP	11.01	□□□□□ -0.65
TIF6	YPR016C	ALG1	P16661	449 aa		11.01	□□□□□ -0.65
TIF6	YPR016C	CDC60	P26637	1090 aa	Known RBP	11.01	□□□□□ -0.65
TIF6	YPR016C	MCM4	P30665	933 aa	Known RBP	11.01	□□□□□ -0.65
TIF6	YPR016C	YKR018C	P36114	725 aa		11.01	□□□□□ -0.65
TIF6	YPR016C	RFT1	P38206	574 aa	Predicted RBP	11.01	□□□□□ -0.65
TIF6	YPR016C	ORC6	P38826	435 aa		11.01	□□□□□ -0.65
TIF6	YPR016C	LIF1	P53150	421 aa		11.01	□□□□□ -0.65
TIF6	YPR016C	RTC4	P53850	401 aa		11.01	□□□□□ -0.65
TIF6	YPR016C	SPH1	Q06160	661 aa		11.01	□□□□□ -0.65
TIF6	YPR016C	DDP1	Q99321	188 aa	Known RBP	11.01	□□□□□ -0.65
TIF6	YPR016C	UGA4	P32837	571 aa		11	□□□□□ -0.65
TIF6	YPR016C	RSC30	P38781	883 aa		11	□□□□□ -0.65
TIF6	YPR016C	ATG32	P40458	529 aa		11	□□□□□ -0.65
TIF6	YPR016C	SDA1	P53313	767 aa	Known RBP	11	□□□□□ -0.65
TIF6	YPR016C	VMS1	Q04311	632 aa	Known RBP	11	□□□□□ -0.65
TIF6	YPR016C	DUS3	Q06053	668 aa	Known RBP	11	□□□□□ -0.65
TIF6	YPR016C	MMR1	Q06324	491 aa		11	□□□□□ -0.65
TIF6	YPR016C	GSY1	P23337	708 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	SRO9	P25567	434 aa	Known RBP	10.99	□□□□□ -0.65
TIF6	YPR016C	EUG1	P32474	517 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	RPN12	P32496	274 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	MOT2	P34909	587 aa	Known RBP	10.99	□□□□□ -0.65
TIF6	YPR016C	GAA1	P39012	614 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	GPB2	P39717	880 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	SPR3	P41901	512 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	ARP6	Q12509	438 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	TIF6	Q12522	245 aa	Known RBP	10.99	□□□□□ -0.65
TIF6	YPR016C	TRS33	Q99394	268 aa		10.99	□□□□□ -0.65
TIF6	YPR016C	ILV1	P00927	576 aa	Known RBP	10.98	□□□□□ -0.65
TIF6	YPR016C	SES1	P07284	462 aa	Known RBP	10.98	□□□□□ -0.65
TIF6	YPR016C	GPA1	P08539	472 aa		10.98	□□□□□ -0.65
TIF6	YPR016C	MCM3	P24279	971 aa	Known RBP	10.98	□□□□□ -0.65
TIF6	YPR016C	PKC1	P24583	1151 aa		10.98	□□□□□ -0.65
TIF6	YPR016C	MCR1	P36060	302 aa	Known RBP	10.98	□□□□□ -0.65
TIF6	YPR016C	YER130C	P39959	443 aa		10.98	□□□□□ -0.65
TIF6	YPR016C	YPT11	P48559	417 aa		10.98	□□□□□ -0.65
TIF6	YPR016C	CUE3	P53137	624 aa	Known RBP	10.98	□□□□□ -0.65
TIF6	YPR016C	ORC4	P54791	529 aa		10.98	□□□□□ -0.65
TIF6	YPR016C	YLR326W	Q06170	240 aa	Known RBP	10.98	□□□□□ -0.65
TIF6	YPR016C	GUD1	Q07729	489 aa		10.98	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms