RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C ILV3P39522 585 aaKnown RBP10.27□□□□□ -0.77
PUP1YOR157C BDP1P46678 594 aa10.27□□□□□ -0.77
PUP1YOR157C HGH1P48362 394 aaKnown RBP10.27□□□□□ -0.77
PUP1YOR157C ALO1P54783 526 aaKnown RBP10.27□□□□□ -0.77
PUP1YOR157C MSC2Q03455 724 aa10.27□□□□□ -0.77
PUP1YOR157C CHO2P05374 869 aaKnown RBP10.26□□□□□ -0.77
PUP1YOR157C COQ1P18900 473 aa10.26□□□□□ -0.77
PUP1YOR157C SEC8P32855 1065 aa10.26□□□□□ -0.77
PUP1YOR157C YNL034WP53963 612 aa10.26□□□□□ -0.77
PUP1YOR157C YNL018CP53976 612 aa10.26□□□□□ -0.77
PUP1YOR157C SUE1Q06524 206 aa10.26□□□□□ -0.77
PUP1YOR157C TFA1P36100 482 aa10.25□□□□□ -0.77
PUP1YOR157C SLN1P39928 1220 aaPredicted RBP10.25□□□□□ -0.77
PUP1YOR157C BBC1P47068 1157 aa10.25□□□□□ -0.77
PUP1YOR157C RPS7BP48164 190 aaKnown RBP10.25□□□□□ -0.77
PUP1YOR157C ESF1Q06344 628 aaKnown RBP10.25□□□□□ -0.77
PUP1YOR157C UTP4Q06679 776 aaKnown RBP10.25□□□□□ -0.77
PUP1YOR157C PBY1P38254 753 aa10.24□□□□□ -0.77
PUP1YOR157C ALD5P40047 520 aaKnown RBP10.24□□□□□ -0.77
PUP1YOR157C PIB2P53191 635 aa10.24□□□□□ -0.77
PUP1YOR157C TEL1P38110 2787 aa10.23□□□□□ -0.77
PUP1YOR157C NDT80P38830 627 aa10.23□□□□□ -0.77
PUP1YOR157C SPO74P45819 413 aa10.23□□□□□ -0.77
PUP1YOR157C MET13P53128 600 aa10.23□□□□□ -0.77
PUP1YOR157C ART5P53244 586 aaKnown RBP10.23□□□□□ -0.77
PUP1YOR157C HEH2Q03281 663 aa10.23□□□□□ -0.77
PUP1YOR157C RAD59Q12223 238 aa10.23□□□□□ -0.77
PUP1YOR157C NOT3P06102 836 aaKnown RBP10.22□□□□□ -0.77
PUP1YOR157C YIL092WP40497 633 aa10.22□□□□□ -0.77
PUP1YOR157C ENP2P48234 707 aaKnown RBP10.22□□□□□ -0.77
PUP1YOR157C MLC1P53141 149 aa10.22□□□□□ -0.77
PUP1YOR157C FOL1P53848 824 aa10.22□□□□□ -0.77
PUP1YOR157C GUD1Q07729 489 aa10.22□□□□□ -0.77
PUP1YOR157C VPS45P38932 577 aa10.21□□□□□ -0.77
PUP1YOR157C YGR035CP53222 116 aa10.21□□□□□ -0.77
PUP1YOR157C VPS30Q02948 557 aa10.21□□□□□ -0.77
PUP1YOR157C FKS1P38631 1876 aaKnown RBP10.21□□□□□ -0.78
PUP1YOR157C SIS1P25294 352 aaKnown RBP10.2□□□□□ -0.78
PUP1YOR157C RRP8P38961 392 aaKnown RBP10.2□□□□□ -0.78
PUP1YOR157C VPS27P40343 622 aaKnown RBP10.2□□□□□ -0.78
PUP1YOR157C PDR18P53756 1333 aa10.2□□□□□ -0.78
PUP1YOR157C PNG1Q02890 363 aa10.2□□□□□ -0.78
PUP1YOR157C PKH3Q03306 898 aaPredicted RBP10.2□□□□□ -0.78
PUP1YOR157C PPZ1P26570 692 aa10.19□□□□□ -0.78
PUP1YOR157C LCD1Q04377 747 aa10.19□□□□□ -0.78
PUP1YOR157C TAH18Q12181 623 aa10.19□□□□□ -0.78
PUP1YOR157C RIT1P23796 513 aa10.18□□□□□ -0.78
PUP1YOR157C SYN8P31377 255 aa10.18□□□□□ -0.78
PUP1YOR157C FAF1P40546 346 aaPredicted RBP10.18□□□□□ -0.78
PUP1YOR157C YLL058WQ12198 575 aa10.18□□□□□ -0.78
PUP1YOR157C NUC1P08466 329 aa10.17□□□□□ -0.78
PUP1YOR157C POL3P15436 1097 aa10.17□□□□□ -0.78
PUP1YOR157C FUB1P25659 250 aa10.17□□□□□ -0.78
PUP1YOR157C SKY1Q03656 742 aa10.17□□□□□ -0.78
PUP1YOR157C IRA2P19158 3079 aa10.17□□□□□ -0.78
PUP1YOR157C PRC1P00729 532 aa10.16□□□□□ -0.78
PUP1YOR157C CAN1P04817 590 aa10.16□□□□□ -0.78
PUP1YOR157C CUP1-1P0CX80 61 aa10.16□□□□□ -0.78
PUP1YOR157C CUP1-2P0CX81 61 aa10.16□□□□□ -0.78
PUP1YOR157C YTA12P40341 825 aa10.16□□□□□ -0.78
PUP1YOR157C OPT1P40897 799 aa10.16□□□□□ -0.78
PUP1YOR157C RPS15Q01855 142 aaKnown RBP10.16□□□□□ -0.78
PUP1YOR157C KEX2P13134 814 aa10.15□□□□□ -0.78
PUP1YOR157C ECM21P38167 1117 aaKnown RBP10.15□□□□□ -0.78
PUP1YOR157C PES4P39684 611 aa10.15□□□□□ -0.78
PUP1YOR157C HUL4P40985 892 aa10.15□□□□□ -0.78
PUP1YOR157C FMS1P50264 508 aa10.15□□□□□ -0.78
PUP1YOR157C LIF1P53150 421 aa10.15□□□□□ -0.78
PUP1YOR157C UFD2P54860 961 aa10.15□□□□□ -0.78
PUP1YOR157C YLR326WQ06170 240 aaKnown RBP10.15□□□□□ -0.78
PUP1YOR157C RVB2Q12464 471 aaKnown RBP10.15□□□□□ -0.78
PUP1YOR157C AFT1P22149 690 aa10.14□□□□□ -0.79
PUP1YOR157C KIN82P25341 720 aa10.14□□□□□ -0.79
PUP1YOR157C STB5P38699 743 aa10.14□□□□□ -0.79
PUP1YOR157C PTA1Q01329 785 aaPredicted RBP10.14□□□□□ -0.79
PUP1YOR157C SPO71Q03868 1245 aa10.14□□□□□ -0.79
PUP1YOR157C TY1B-AO13527 1196 aaKnown RBP10.13□□□□□ -0.79
PUP1YOR157C MSD1P15179 658 aaKnown RBP10.13□□□□□ -0.79
PUP1YOR157C SMY2P32909 740 aaKnown RBP10.13□□□□□ -0.79
PUP1YOR157C SAD1P43589 448 aa10.13□□□□□ -0.79
PUP1YOR157C UBP15P50101 1230 aa10.13□□□□□ -0.79
PUP1YOR157C YML020WQ03722 664 aa10.13□□□□□ -0.79
PUP1YOR157C MAG2Q06436 670 aaKnown RBP10.13□□□□□ -0.79
PUP1YOR157C RPL8BP29453 256 aaKnown RBP10.12□□□□□ -0.79
PUP1YOR157C SUV3P32580 737 aa10.12□□□□□ -0.79
PUP1YOR157C MYO3P36006 1272 aa10.12□□□□□ -0.79
PUP1YOR157C NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.12□□□□□ -0.79not detected
PUP1YOR157C IRC10Q08118 586 aa10.12□□□□□ -0.79
PUP1YOR157C RIF1P29539 1916 aa10.11□□□□□ -0.79
PUP1YOR157C ANP1P32629 500 aa10.11□□□□□ -0.79
PUP1YOR157C LSB1P53281 241 aa10.11□□□□□ -0.79
PUP1YOR157C HDA1P53973 706 aa10.11□□□□□ -0.79
PUP1YOR157C CDC45Q08032 650 aa10.11□□□□□ -0.79
PUP1YOR157C MBR1P23493 339 aa10.1□□□□□ -0.79
PUP1YOR157C DRE2P36152 348 aa10.1□□□□□ -0.79
PUP1YOR157C MRPS35P53292 345 aa10.1□□□□□ -0.79
PUP1YOR157C RPT6Q01939 405 aaKnown RBP10.1□□□□□ -0.79
PUP1YOR157C CCH1P50077 2039 aa10.09□□□□□ -0.79
PUP1YOR157C RAD2P07276 1031 aa10.09□□□□□ -0.79
PUP1YOR157C KTR4P38131 464 aa10.09□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 74 ms