RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W ORC3P54790 616 aa3.85□□□□□ -1.79
SNF12YNR023W YPL109CQ02981 657 aa3.85□□□□□ -1.79
SNF12YNR023W HAS1Q03532 505 aaKnown RBP3.85□□□□□ -1.79
SNF12YNR023W ADI1Q03677 179 aa3.85□□□□□ -1.79
SNF12YNR023W TOS4Q06266 489 aa3.85□□□□□ -1.79
SNF12YNR023W RIM11P38615 370 aa3.84□□□□□ -1.79
SNF12YNR023W MON1P53129 644 aa3.84□□□□□ -1.79
SNF12YNR023W ULP1Q02724 621 aa3.84□□□□□ -1.79
SNF12YNR023W SSY1Q03770 852 aa3.84□□□□□ -1.79
SNF12YNR023W PRP5P21372 849 aaPredicted RBP3.84□□□□□ -1.8
SNF12YNR023W NPR1P22211 790 aa3.84□□□□□ -1.8
SNF12YNR023W MCM5P29496 775 aaKnown RBP3.84□□□□□ -1.8
SNF12YNR023W SHU2P38957 223 aa3.84□□□□□ -1.8
SNF12YNR023W YAF9P53930 226 aa3.84□□□□□ -1.8
SNF12YNR023W DOT1Q04089 582 aaKnown RBP3.84□□□□□ -1.8
SNF12YNR023W PIN2Q12057 282 aa3.84□□□□□ -1.8
SNF12YNR023W GLO4Q12320 285 aa3.84□□□□□ -1.8
SNF12YNR023W CMR1Q12510 522 aaKnown RBP3.84□□□□□ -1.8
SNF12YNR023W AIM44Q99299 758 aa3.84□□□□□ -1.8
SNF12YNR023W TUB2P02557 457 aaKnown RBP3.83□□□□□ -1.8
SNF12YNR023W DUR3P33413 735 aa3.83□□□□□ -1.8
SNF12YNR023W SQT1P35184 431 aa3.83□□□□□ -1.8
SNF12YNR023W VPS16Q03308 798 aa3.83□□□□□ -1.8
SNF12YNR023W HVG1P0CE11 249 aa3.82□□□□□ -1.8
SNF12YNR023W TAF13P11747 167 aa3.82□□□□□ -1.8
SNF12YNR023W FET4P40988 552 aa3.82□□□□□ -1.8
SNF12YNR023W NNF1P47149 201 aa3.82□□□□□ -1.8
SNF12YNR023W MRPL22P53881 309 aa3.82□□□□□ -1.8
SNF12YNR023W TRE1Q08919 783 aa3.82□□□□□ -1.8
SNF12YNR023W UGA4P32837 571 aa3.81□□□□□ -1.8
SNF12YNR023W TOD6P34219 525 aa3.81□□□□□ -1.8
SNF12YNR023W RSM26P47141 266 aa3.81□□□□□ -1.8
SNF12YNR023W NOG1Q02892 647 aaKnown RBP3.81□□□□□ -1.8
SNF12YNR023W RPS4AP0CX35 261 aaKnown RBP3.81□□□□□ -1.8
SNF12YNR023W RPS4BP0CX36 261 aaKnown RBP3.81□□□□□ -1.8
SNF12YNR023W PRO1P32264 428 aa3.81□□□□□ -1.8
SNF12YNR023W PIC2P40035 300 aa3.8□□□□□ -1.8
SNF12YNR023W ORC1P54784 914 aaPredicted RBP3.8□□□□□ -1.8
SNF12YNR023W CDC34P14682 295 aa3.79□□□□□ -1.8
SNF12YNR023W YKL077WP36081 392 aa3.79□□□□□ -1.8
SNF12YNR023W PEX28P38848 579 aa3.79□□□□□ -1.8
SNF12YNR023W VAC8P39968 578 aa3.79□□□□□ -1.8
SNF12YNR023W CWC24P53769 259 aa3.79□□□□□ -1.8
SNF12YNR023W ALD6P54115 500 aaKnown RBP3.79□□□□□ -1.8
SNF12YNR023W RTT10Q08924 1013 aa3.79□□□□□ -1.8
SNF12YNR023W HTS1P07263 546 aaKnown RBP3.78□□□□□ -1.8
SNF12YNR023W SEC23P15303 768 aaKnown RBP3.78□□□□□ -1.8
SNF12YNR023W VMA4P22203 233 aaKnown RBP3.78□□□□□ -1.8
SNF12YNR023W MSH3P25336 1018 aa3.78□□□□□ -1.8
SNF12YNR023W OCA5P38738 679 aa3.78□□□□□ -1.8
SNF12YNR023W ENT3P47160 408 aa3.78□□□□□ -1.8
SNF12YNR023W PEX13P80667 386 aa3.78□□□□□ -1.8
SNF12YNR023W TMA46Q12000 345 aaKnown RBP3.78□□□□□ -1.8
SNF12YNR023W SOD2P00447 233 aa3.78□□□□□ -1.8
SNF12YNR023W RAD27P26793 382 aa3.78□□□□□ -1.8
SNF12YNR023W ARL1P38116 183 aaKnown RBP3.78□□□□□ -1.8
SNF12YNR023W EXO5P38289 585 aa3.78□□□□□ -1.8
SNF12YNR023W YGL140CP53120 1219 aa3.78□□□□□ -1.8
SNF12YNR023W YIG1Q08956 461 aa3.78□□□□□ -1.8
SNF12YNR023W WRS1Q12109 432 aaKnown RBP3.78□□□□□ -1.8
SNF12YNR023W LPX1Q12405 387 aaKnown RBP3.78□□□□□ -1.8
SNF12YNR023W GCR1P07261 785 aa3.77□□□□□ -1.81
SNF12YNR023W SHM2P37291 469 aaKnown RBP3.77□□□□□ -1.81
SNF12YNR023W YTA7P40340 1379 aa3.77□□□□□ -1.81
SNF12YNR023W XKS1P42826 600 aa3.77□□□□□ -1.81
SNF12YNR023W YJL049WP47048 450 aa3.77□□□□□ -1.81
SNF12YNR023W UTP22P53254 1237 aaPredicted RBP3.77□□□□□ -1.81
SNF12YNR023W MRL1Q06815 381 aa3.77□□□□□ -1.81
SNF12YNR023W KRI1P42846 591 aaKnown RBP3.76□□□□□ -1.81
SNF12YNR023W MTR4P47047 1073 aaKnown RBP3.76□□□□□ -1.81
SNF12YNR023W GCV1P48015 400 aa3.76□□□□□ -1.81
SNF12YNR023W YGR053CP53234 283 aa3.76□□□□□ -1.81
SNF12YNR023W GDE1Q02979 1223 aa3.76□□□□□ -1.81
SNF12YNR023W CLU1Q03690 1277 aaKnown RBP3.76□□□□□ -1.81
SNF12YNR023W YLR358CO13565 187 aa3.75□□□□□ -1.81
SNF12YNR023W DUT1P33317 147 aa3.75□□□□□ -1.81
SNF12YNR023W RDH54P38086 958 aa3.75□□□□□ -1.81
SNF12YNR023W PTC7P38797 343 aa3.75□□□□□ -1.81
SNF12YNR023W SIW14P53965 281 aa3.75□□□□□ -1.81
SNF12YNR023W SSF2Q12153 453 aaPredicted RBP3.75□□□□□ -1.81
SNF12YNR023W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
SNF12YNR023W FAA4P47912 694 aaKnown RBP3.75□□□□□ -1.81
SNF12YNR023W GNP1P48813 663 aa3.75□□□□□ -1.81
SNF12YNR023W MEC3Q02574 474 aa3.75□□□□□ -1.81
SNF12YNR023W YML122CQ03207 126 aa3.75□□□□□ -1.81
SNF12YNR023W YPL277CQ08989 487 aa3.75□□□□□ -1.81
SNF12YNR023W RPS13P05756 151 aaKnown RBP3.74□□□□□ -1.81
SNF12YNR023W CTS1P29029 562 aa3.74□□□□□ -1.81
SNF12YNR023W PEX7P39108 375 aa3.74□□□□□ -1.81
SNF12YNR023W RKM2Q03942 479 aa3.74□□□□□ -1.81
SNF12YNR023W FPR4Q06205 392 aaPredicted RBP3.74□□□□□ -1.81
SNF12YNR023W YDL177CQ12257 170 aa3.74□□□□□ -1.81
SNF12YNR023W YOL098CQ12496 1037 aa3.74□□□□□ -1.81
SNF12YNR023W TY1A-LR4P0C2I8 440 aaKnown RBP3.73□□□□□ -1.81
SNF12YNR023W TY1A-DR6P0CX70 440 aa3.73□□□□□ -1.81
SNF12YNR023W TY1A-ER1P0CX71 440 aa3.73□□□□□ -1.81
SNF12YNR023W TY1A-LR2P0CX72 440 aa3.73□□□□□ -1.81
SNF12YNR023W TY1A-PLP0CX73 440 aa3.73□□□□□ -1.81
SNF12YNR023W TY1A-JR1P0CX74 440 aa3.73□□□□□ -1.81
SNF12YNR023W TY1A-LR3P0CX75 440 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms