RNA–Protein interactions for RNA: YNL008C

ASI3, Transcript of Subunit of the nuclear inner membrane Asi ubiquitin ligase complex, yeast

Gene ASI3, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASI3	YNL008C	GNP1	P48813	663 aa		4.68	□□□□□ -1.66
ASI3	YNL008C	SIW14	P53965	281 aa		4.68	□□□□□ -1.66
ASI3	YNL008C	LAP2	Q10740	671 aa		4.68	□□□□□ -1.66
ASI3	YNL008C	COQ2	P32378	372 aa		4.67	□□□□□ -1.66
ASI3	YNL008C	PGM1	P33401	570 aa	Known RBP	4.67	□□□□□ -1.66
ASI3	YNL008C	MSH4	P40965	878 aa	Predicted RBP	4.67	□□□□□ -1.66
ASI3	YNL008C	RKM2	Q03942	479 aa		4.67	□□□□□ -1.66
ASI3	YNL008C	CDC34	P14682	295 aa		4.67	□□□□□ -1.66
ASI3	YNL008C	SAF1	P38352	637 aa		4.67	□□□□□ -1.66
ASI3	YNL008C	HSE1	P38753	452 aa		4.67	□□□□□ -1.66
ASI3	YNL008C	ROD1	Q02805	837 aa		4.67	□□□□□ -1.66
ASI3	YNL008C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
ASI3	YNL008C	PIN2	Q12057	282 aa		4.67	□□□□□ -1.66
ASI3	YNL008C	RAD27	P26793	382 aa		4.66	□□□□□ -1.66
ASI3	YNL008C	SMY2	P32909	740 aa	Known RBP	4.66	□□□□□ -1.66
ASI3	YNL008C	NNK1	P36003	928 aa		4.66	□□□□□ -1.66
ASI3	YNL008C	HXT13	P39924	564 aa		4.66	□□□□□ -1.66
ASI3	YNL008C	ENT3	P47160	408 aa		4.66	□□□□□ -1.66
ASI3	YNL008C	HXT17	P53631	564 aa		4.66	□□□□□ -1.66
ASI3	YNL008C	HXT15	P54854	567 aa		4.66	□□□□□ -1.66
ASI3	YNL008C	VPS16	Q03308	798 aa		4.66	□□□□□ -1.66
ASI3	YNL008C	NFS1	P25374	497 aa		4.65	□□□□□ -1.66
ASI3	YNL008C	MKK2	P32491	506 aa		4.65	□□□□□ -1.66
ASI3	YNL008C	DUT1	P33317	147 aa		4.65	□□□□□ -1.66
ASI3	YNL008C	TMA46	Q12000	345 aa	Known RBP	4.65	□□□□□ -1.66
ASI3	YNL008C	RPS4A	P0CX35	261 aa	Known RBP	4.65	□□□□□ -1.67
ASI3	YNL008C	RPS4B	P0CX36	261 aa	Known RBP	4.65	□□□□□ -1.67
ASI3	YNL008C	CHS2	P14180	963 aa		4.65	□□□□□ -1.67
ASI3	YNL008C	RET1	P22276	1149 aa	Known RBP	4.64	□□□□□ -1.67
ASI3	YNL008C	AFG2	P32794	780 aa		4.64	□□□□□ -1.67
ASI3	YNL008C	MMM1	P41800	426 aa		4.64	□□□□□ -1.67
ASI3	YNL008C	ALT1	P52893	592 aa		4.64	□□□□□ -1.67
ASI3	YNL008C	CWC24	P53769	259 aa		4.64	□□□□□ -1.67
ASI3	YNL008C	RAT1	Q02792	1006 aa	Known RBP	4.64	□□□□□ -1.67
ASI3	YNL008C	MAG2	Q06436	670 aa	Known RBP	4.64	□□□□□ -1.67
ASI3	YNL008C	YLR122C	Q12312	125 aa		4.64	□□□□□ -1.67
ASI3	YNL008C	KAE1	P36132	386 aa		4.63	□□□□□ -1.67
ASI3	YNL008C	VPS53	P47061	822 aa		4.63	□□□□□ -1.67
ASI3	YNL008C	GDE1	Q02979	1223 aa		4.63	□□□□□ -1.67
ASI3	YNL008C	RSA3	Q05942	220 aa	Known RBP	4.63	□□□□□ -1.67
ASI3	YNL008C	YLR257W	Q06146	321 aa	Known RBP	4.63	□□□□□ -1.67
ASI3	YNL008C	RER2	P35196	286 aa		4.63	□□□□□ -1.67
ASI3	YNL008C	ALG3	P38179	458 aa		4.63	□□□□□ -1.67
ASI3	YNL008C	QNS1	P38795	714 aa	Known RBP	4.63	□□□□□ -1.67
ASI3	YNL008C	PTC5	Q12511	572 aa		4.63	□□□□□ -1.67
ASI3	YNL008C	SYP1	P25623	870 aa	Known RBP	4.62	□□□□□ -1.67
ASI3	YNL008C	WHI3	P34761	661 aa	Known RBP	4.62	□□□□□ -1.67
ASI3	YNL008C	VAC8	P39968	578 aa		4.62	□□□□□ -1.67
ASI3	YNL008C	CIT3	P43635	486 aa		4.62	□□□□□ -1.67
ASI3	YNL008C	FAA4	P47912	694 aa	Known RBP	4.62	□□□□□ -1.67
ASI3	YNL008C	YGR053C	P53234	283 aa		4.62	□□□□□ -1.67
ASI3	YNL008C	ALD6	P54115	500 aa	Known RBP	4.62	□□□□□ -1.67
ASI3	YNL008C	EAR1	Q03212	550 aa		4.62	□□□□□ -1.67
ASI3	YNL008C	NMD3	P38861	518 aa	Known RBP	4.62	□□□□□ -1.67
ASI3	YNL008C	EEB1	Q02891	456 aa		4.62	□□□□□ -1.67
ASI3	YNL008C	TPP1	Q03796	238 aa		4.62	□□□□□ -1.67
ASI3	YNL008C	YGR130C	P53278	816 aa		4.61	□□□□□ -1.67
ASI3	YNL008C	YOR059C	Q08448	450 aa	Known RBP	4.61	□□□□□ -1.67
ASI3	YNL008C	PUS7	Q08647	676 aa	Known RBP	4.61	□□□□□ -1.67
ASI3	YNL008C	HRK1	Q08732	759 aa	Known RBP	4.61	□□□□□ -1.67
ASI3	YNL008C	TRP2	P00899	507 aa	Known RBP	4.6	□□□□□ -1.67
ASI3	YNL008C	MSB1	P21339	1137 aa	Known RBP	4.6	□□□□□ -1.67
ASI3	YNL008C	CNN1	P43618	361 aa		4.6	□□□□□ -1.67
ASI3	YNL008C	TYW3	P53177	273 aa		4.6	□□□□□ -1.67
ASI3	YNL008C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
ASI3	YNL008C	SBP1	P10080	294 aa	Known RBP	4.6	□□□□□ -1.67
ASI3	YNL008C	LYP1	P32487	611 aa		4.6	□□□□□ -1.67
ASI3	YNL008C	RCM1	P53972	490 aa		4.6	□□□□□ -1.67
ASI3	YNL008C	TIF35	Q04067	274 aa	Known RBP	4.6	□□□□□ -1.67
ASI3	YNL008C	DBP5	P20449	482 aa	Known RBP	4.59	□□□□□ -1.67
ASI3	YNL008C	KIP1	P28742	1111 aa		4.59	□□□□□ -1.67
ASI3	YNL008C	YJL045W	P47052	634 aa		4.59	□□□□□ -1.67
ASI3	YNL008C	YVC1	Q12324	675 aa		4.59	□□□□□ -1.67
ASI3	YNL008C	RGD1	P38339	666 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	AOS1	Q06624	347 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	CYC7	P00045	113 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	TRP3	P00937	484 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	MLS1	P30952	554 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	MCM7	P38132	845 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	SPO20	Q04359	397 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	MED7	Q08278	222 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	YPL260W	Q08977	551 aa		4.58	□□□□□ -1.68
ASI3	YNL008C	FAL1	Q12099	399 aa	Known RBP	4.58	□□□□□ -1.68
ASI3	YNL008C	GPB2	P39717	880 aa		4.57	□□□□□ -1.68
ASI3	YNL008C	MPH1	P40562	993 aa		4.57	□□□□□ -1.68
ASI3	YNL008C	SPO21	Q12411	609 aa		4.57	□□□□□ -1.68
ASI3	YNL008C	NSI1	Q12457	570 aa		4.57	□□□□□ -1.68
ASI3	YNL008C	INO1	P11986	533 aa		4.56	□□□□□ -1.68
ASI3	YNL008C	PRI2	P20457	528 aa		4.56	□□□□□ -1.68
ASI3	YNL008C	BAS1	P22035	811 aa		4.56	□□□□□ -1.68
ASI3	YNL008C	MOT2	P34909	587 aa	Known RBP	4.56	□□□□□ -1.68
ASI3	YNL008C	OYE3	P41816	400 aa	Predicted RBP	4.56	□□□□□ -1.68
ASI3	YNL008C	HNT2	P49775	206 aa		4.56	□□□□□ -1.68
ASI3	YNL008C	YKR073C	P36153	106 aa		4.56	□□□□□ -1.68
ASI3	YNL008C	ALO1	P54783	526 aa	Known RBP	4.56	□□□□□ -1.68
ASI3	YNL008C	YLR225C	Q05948	407 aa	Known RBP	4.56	□□□□□ -1.68
ASI3	YNL008C	OPI10	Q08202	246 aa		4.56	□□□□□ -1.68
ASI3	YNL008C	TRE1	Q08919	783 aa		4.56	□□□□□ -1.68
ASI3	YNL008C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	RIP-Chip
ASI3	YNL008C	YSC84	P32793	468 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms