RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C ENT3P47160 408 aa7.78□□□□□ -1.16
PEX12YMR026C SIW14P53965 281 aa7.78□□□□□ -1.16
PEX12YMR026C LAP2Q10740 671 aa7.78□□□□□ -1.16
PEX12YMR026C COQ2P32378 372 aa7.77□□□□□ -1.17
PEX12YMR026C SAF1P38352 637 aa7.77□□□□□ -1.17
PEX12YMR026C HXT13P39924 564 aa7.77□□□□□ -1.17
PEX12YMR026C MAD1P40957 749 aa7.77□□□□□ -1.17
PEX12YMR026C HXT17P53631 564 aa7.77□□□□□ -1.17
PEX12YMR026C HXT15P54854 567 aa7.77□□□□□ -1.17
PEX12YMR026C ROD1Q02805 837 aa7.77□□□□□ -1.17
PEX12YMR026C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
PEX12YMR026C DED1P06634 604 aaKnown RBP7.76□□□□□ -1.17
PEX12YMR026C CDC34P14682 295 aa7.76□□□□□ -1.17
PEX12YMR026C CLN2P20438 545 aa7.76□□□□□ -1.17
PEX12YMR026C RAD27P26793 382 aa7.76□□□□□ -1.17
PEX12YMR026C DUT1P33317 147 aa7.76□□□□□ -1.17
PEX12YMR026C NNK1P36003 928 aa7.76□□□□□ -1.17
PEX12YMR026C SMY2P32909 740 aaKnown RBP7.75□□□□□ -1.17
PEX12YMR026C HSE1P38753 452 aa7.75□□□□□ -1.17
PEX12YMR026C MET10P39692 1035 aa7.75□□□□□ -1.17
PEX12YMR026C VPS16Q03308 798 aa7.75□□□□□ -1.17
PEX12YMR026C TMA46Q12000 345 aaKnown RBP7.75□□□□□ -1.17
PEX12YMR026C PIN2Q12057 282 aa7.75□□□□□ -1.17
PEX12YMR026C RPS4AP0CX35 261 aaKnown RBP7.74□□□□□ -1.17
PEX12YMR026C RPS4BP0CX36 261 aaKnown RBP7.74□□□□□ -1.17
PEX12YMR026C NFS1P25374 497 aa7.74□□□□□ -1.17
PEX12YMR026C AFG2P32794 780 aa7.74□□□□□ -1.17
PEX12YMR026C RET1P22276 1149 aaKnown RBP7.73□□□□□ -1.17
PEX12YMR026C MKK2P32491 506 aa7.73□□□□□ -1.17
PEX12YMR026C ALT1P52893 592 aa7.73□□□□□ -1.17
PEX12YMR026C YLR122CQ12312 125 aa7.73□□□□□ -1.17
PEX12YMR026C CHS2P14180 963 aa7.72□□□□□ -1.17
PEX12YMR026C KAE1P36132 386 aa7.72□□□□□ -1.17
PEX12YMR026C RSA3Q05942 220 aaKnown RBP7.72□□□□□ -1.17
PEX12YMR026C YLR257WQ06146 321 aaKnown RBP7.72□□□□□ -1.17
PEX12YMR026C RER2P35196 286 aa7.71□□□□□ -1.18
PEX12YMR026C QNS1P38795 714 aaKnown RBP7.71□□□□□ -1.18
PEX12YMR026C MMM1P41800 426 aa7.71□□□□□ -1.18
PEX12YMR026C VPS53P47061 822 aa7.71□□□□□ -1.18
PEX12YMR026C RAT1Q02792 1006 aaKnown RBP7.71□□□□□ -1.18
PEX12YMR026C MAG2Q06436 670 aaKnown RBP7.71□□□□□ -1.18
PEX12YMR026C SYP1P25623 870 aaKnown RBP7.7□□□□□ -1.18
PEX12YMR026C EAR1Q03212 550 aa7.7□□□□□ -1.18
PEX12YMR026C PTC5Q12511 572 aa7.7□□□□□ -1.18
PEX12YMR026C MSB1P21339 1137 aaKnown RBP7.69□□□□□ -1.18
PEX12YMR026C WHI3P34761 661 aaKnown RBP7.69□□□□□ -1.18
PEX12YMR026C ALG3P38179 458 aa7.69□□□□□ -1.18
PEX12YMR026C YGR053CP53234 283 aa7.69□□□□□ -1.18
PEX12YMR026C CWC24P53769 259 aa7.69□□□□□ -1.18
PEX12YMR026C EEB1Q02891 456 aa7.69□□□□□ -1.18
PEX12YMR026C GDE1Q02979 1223 aa7.69□□□□□ -1.18
PEX12YMR026C CIT3P43635 486 aa7.68□□□□□ -1.18
PEX12YMR026C FAA4P47912 694 aaKnown RBP7.68□□□□□ -1.18
PEX12YMR026C PUS7Q08647 676 aaKnown RBP7.68□□□□□ -1.18
PEX12YMR026C NMD3P38861 518 aaKnown RBP7.67□□□□□ -1.18
PEX12YMR026C YGR130CP53278 816 aa7.67□□□□□ -1.18
PEX12YMR026C ALD6P54115 500 aaKnown RBP7.67□□□□□ -1.18
PEX12YMR026C TPP1Q03796 238 aa7.67□□□□□ -1.18
PEX12YMR026C YOR059CQ08448 450 aaKnown RBP7.67□□□□□ -1.18
PEX12YMR026C VAC8P39968 578 aa7.66□□□□□ -1.18
PEX12YMR026C CNN1P43618 361 aa7.66□□□□□ -1.18
PEX12YMR026C RCM1P53972 490 aa7.66□□□□□ -1.18
PEX12YMR026C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
PEX12YMR026C HRK1Q08732 759 aaKnown RBP7.66□□□□□ -1.18
PEX12YMR026C DBP5P20449 482 aaKnown RBP7.65□□□□□ -1.18
PEX12YMR026C LYP1P32487 611 aa7.65□□□□□ -1.18
PEX12YMR026C YVC1Q12324 675 aa7.65□□□□□ -1.18
PEX12YMR026C TRP2P00899 507 aaKnown RBP7.64□□□□□ -1.19
PEX12YMR026C TRP3P00937 484 aa7.64□□□□□ -1.19
PEX12YMR026C KIP1P28742 1111 aa7.64□□□□□ -1.19
PEX12YMR026C TYW3P53177 273 aa7.64□□□□□ -1.19
PEX12YMR026C TIF35Q04067 274 aaKnown RBP7.64□□□□□ -1.19
PEX12YMR026C RGD1P38339 666 aa7.63□□□□□ -1.19
PEX12YMR026C YJL045WP47052 634 aa7.63□□□□□ -1.19
PEX12YMR026C SBP1P10080 294 aaKnown RBP7.62□□□□□ -1.19
PEX12YMR026C MLS1P30952 554 aa7.62□□□□□ -1.19
PEX12YMR026C MPH1P40562 993 aa7.62□□□□□ -1.19
PEX12YMR026C AOS1Q06624 347 aa7.62□□□□□ -1.19
PEX12YMR026C MED7Q08278 222 aa7.62□□□□□ -1.19
PEX12YMR026C YPL260WQ08977 551 aa7.62□□□□□ -1.19
PEX12YMR026C CYC7P00045 113 aa7.61□□□□□ -1.19
PEX12YMR026C OYE3P41816 400 aaPredicted RBP7.61□□□□□ -1.19
PEX12YMR026C YKR073CP36153 106 aa7.6□□□□□ -1.19
PEX12YMR026C SPO20Q04359 397 aa7.6□□□□□ -1.19
PEX12YMR026C SPO21Q12411 609 aa7.6□□□□□ -1.19
PEX12YMR026C NSI1Q12457 570 aa7.6□□□□□ -1.19
PEX12YMR026C YSC84P32793 468 aa7.59□□□□□ -1.19
PEX12YMR026C MCM7P38132 845 aa7.59□□□□□ -1.19
PEX12YMR026C GPB2P39717 880 aa7.59□□□□□ -1.19
PEX12YMR026C HNT2P49775 206 aa7.59□□□□□ -1.19
PEX12YMR026C ALO1P54783 526 aaKnown RBP7.59□□□□□ -1.19
PEX12YMR026C OPI10Q08202 246 aa7.59□□□□□ -1.19
PEX12YMR026C FAL1Q12099 399 aaKnown RBP7.59□□□□□ -1.19
PEX12YMR026C GCD1P09032 578 aaPredicted RBP7.58□□□□□ -1.2
PEX12YMR026C INO1P11986 533 aa7.58□□□□□ -1.2
PEX12YMR026C PUF4P25339 888 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
PEX12YMR026C MOT2P34909 587 aaKnown RBP7.58□□□□□ -1.2
PEX12YMR026C PEX7P39108 375 aa7.58□□□□□ -1.2
PEX12YMR026C YLR225CQ05948 407 aaKnown RBP7.58□□□□□ -1.2
PEX12YMR026C TRE1Q08919 783 aa7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 219.3 ms