RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C SNO2P53823 222 aa3.32□□□□□ -1.88
SOK2YMR016C YDL177CQ12257 170 aa3.32□□□□□ -1.88
SOK2YMR016C PHO4P07270 312 aaKnown RBP3.31□□□□□ -1.88
SOK2YMR016C TY1A-LR4P0C2I8 440 aaKnown RBP3.31□□□□□ -1.88
SOK2YMR016C TY1A-DR6P0CX70 440 aa3.31□□□□□ -1.88
SOK2YMR016C TY1A-ER1P0CX71 440 aa3.31□□□□□ -1.88
SOK2YMR016C TY1A-LR2P0CX72 440 aa3.31□□□□□ -1.88
SOK2YMR016C TY1A-PLP0CX73 440 aa3.31□□□□□ -1.88
SOK2YMR016C TY1A-JR1P0CX74 440 aa3.31□□□□□ -1.88
SOK2YMR016C TY1A-LR3P0CX75 440 aa3.31□□□□□ -1.88
SOK2YMR016C TY1A-ML2P0CX76 440 aa3.31□□□□□ -1.88
SOK2YMR016C MDL2P33311 773 aa3.31□□□□□ -1.88
SOK2YMR016C MTR4P47047 1073 aaKnown RBP3.31□□□□□ -1.88
SOK2YMR016C YJR107WP47145 328 aa3.31□□□□□ -1.88
SOK2YMR016C HRK1Q08732 759 aaKnown RBP3.31□□□□□ -1.88
SOK2YMR016C TY1A-GR1Q12085 440 aa3.31□□□□□ -1.88
SOK2YMR016C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.31□□□□□ -1.88
SOK2YMR016C TY1A-OLQ92392 440 aaKnown RBP3.31□□□□□ -1.88
SOK2YMR016C YHL012WP38709 493 aa3.31□□□□□ -1.88
SOK2YMR016C YAR028WP39548 234 aa3.31□□□□□ -1.88
SOK2YMR016C FYV10P40492 516 aa3.31□□□□□ -1.88
SOK2YMR016C ENV11P53246 860 aa3.31□□□□□ -1.88
SOK2YMR016C TOD6P34219 525 aa3.3□□□□□ -1.88
SOK2YMR016C ETP1P38748 585 aaKnown RBP3.3□□□□□ -1.88
SOK2YMR016C POL32P47110 350 aa3.3□□□□□ -1.88
SOK2YMR016C LAP2Q10740 671 aa3.3□□□□□ -1.88
SOK2YMR016C SEC8P32855 1065 aa3.3□□□□□ -1.88
SOK2YMR016C EXO5P38289 585 aa3.3□□□□□ -1.88
SOK2YMR016C DAK2P43550 591 aa3.3□□□□□ -1.88
SOK2YMR016C RPS13P05756 151 aaKnown RBP3.29□□□□□ -1.88
SOK2YMR016C SRO9P25567 434 aaKnown RBP3.29□□□□□ -1.88
SOK2YMR016C ATG14P38270 344 aa3.29□□□□□ -1.88
SOK2YMR016C YLR257WQ06146 321 aaKnown RBP3.29□□□□□ -1.88
SOK2YMR016C INP54Q08227 384 aaKnown RBP3.29□□□□□ -1.88
SOK2YMR016C YPL277CQ08989 487 aa3.29□□□□□ -1.88
SOK2YMR016C YLR358CO13565 187 aa3.29□□□□□ -1.88
SOK2YMR016C SAM35P14693 329 aa3.29□□□□□ -1.88
SOK2YMR016C RET1P22276 1149 aaKnown RBP3.29□□□□□ -1.88
SOK2YMR016C SEC20P28791 383 aa3.29□□□□□ -1.88
SOK2YMR016C SLS1P42900 643 aa3.28□□□□□ -1.88
SOK2YMR016C SAM37P50110 327 aa3.28□□□□□ -1.88
SOK2YMR016C CLU1Q03690 1277 aaKnown RBP3.28□□□□□ -1.88
SOK2YMR016C SPR28Q04921 423 aa3.28□□□□□ -1.88
SOK2YMR016C NEM1P38757 446 aa3.27□□□□□ -1.89
SOK2YMR016C MON1P53129 644 aa3.27□□□□□ -1.89
SOK2YMR016C SNU71P53207 620 aaKnown RBP3.27□□□□□ -1.89
SOK2YMR016C NOG1Q02892 647 aaKnown RBP3.27□□□□□ -1.89
SOK2YMR016C NOC3Q07896 663 aaPredicted RBP3.27□□□□□ -1.89
SOK2YMR016C YOR352WQ08816 343 aa3.27□□□□□ -1.89
SOK2YMR016C ABZ1P37254 787 aaPredicted RBP3.27□□□□□ -1.89
SOK2YMR016C NBA1Q08229 501 aaKnown RBP3.27□□□□□ -1.89
SOK2YMR016C CIC1P38779 376 aaKnown RBP3.26□□□□□ -1.89
SOK2YMR016C RSA3Q05942 220 aaKnown RBP3.26□□□□□ -1.89
SOK2YMR016C PRE10P21242 288 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SOK2YMR016C AIM26P32858 118 aa3.26□□□□□ -1.89
SOK2YMR016C OYE2Q03558 400 aaKnown RBP3.26□□□□□ -1.89
SOK2YMR016C YCS4Q06156 1176 aa3.26□□□□□ -1.89
SOK2YMR016C TUB2P02557 457 aaKnown RBP3.25□□□□□ -1.89
SOK2YMR016C MCM2P29469 868 aa3.25□□□□□ -1.89
SOK2YMR016C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
SOK2YMR016C UTP5Q04177 643 aaKnown RBP3.25□□□□□ -1.89
SOK2YMR016C VMA4P22203 233 aaKnown RBP3.25□□□□□ -1.89
SOK2YMR016C OCA5P38738 679 aa3.25□□□□□ -1.89
SOK2YMR016C CTS1P29029 562 aa3.24□□□□□ -1.89
SOK2YMR016C UGA4P32837 571 aa3.24□□□□□ -1.89
SOK2YMR016C RPT1P33299 467 aaKnown RBP3.24□□□□□ -1.89
SOK2YMR016C SHM2P37291 469 aaKnown RBP3.24□□□□□ -1.89
SOK2YMR016C XKS1P42826 600 aa3.24□□□□□ -1.89
SOK2YMR016C SPS1P08458 490 aa3.24□□□□□ -1.89
SOK2YMR016C FAA3P39002 694 aa3.24□□□□□ -1.89
SOK2YMR016C VPS53P47061 822 aa3.24□□□□□ -1.89
SOK2YMR016C HNT2P49775 206 aa3.24□□□□□ -1.89
SOK2YMR016C RKM2Q03942 479 aa3.24□□□□□ -1.89
SOK2YMR016C RSC58Q07979 502 aa3.24□□□□□ -1.89
SOK2YMR016C PNS1Q12412 539 aa3.24□□□□□ -1.89
SOK2YMR016C KAR2P16474 682 aaKnown RBP3.23□□□□□ -1.89
SOK2YMR016C MSH3P25336 1018 aa3.23□□□□□ -1.89
SOK2YMR016C TAT2P38967 592 aa3.23□□□□□ -1.89
SOK2YMR016C THI12P42883 340 aa3.23□□□□□ -1.89
SOK2YMR016C THI5P43534 340 aa3.23□□□□□ -1.89
SOK2YMR016C THI11P47183 340 aa3.23□□□□□ -1.89
SOK2YMR016C THI13Q07748 340 aa3.23□□□□□ -1.89
SOK2YMR016C COQ4O13525 335 aa3.23□□□□□ -1.89
SOK2YMR016C HXK1P04806 485 aaKnown RBP3.23□□□□□ -1.89
SOK2YMR016C QNS1P38795 714 aaKnown RBP3.23□□□□□ -1.89
SOK2YMR016C NMD3P38861 518 aaKnown RBP3.23□□□□□ -1.89
SOK2YMR016C YJL045WP47052 634 aa3.23□□□□□ -1.89
SOK2YMR016C YDR132CQ03900 495 aa3.23□□□□□ -1.89
SOK2YMR016C SGD1Q06132 899 aa3.23□□□□□ -1.89
SOK2YMR016C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89 RIP-Chip
SOK2YMR016C CCZ1P38273 704 aa3.22□□□□□ -1.89
SOK2YMR016C MPT5P39016 859 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SOK2YMR016C URN1Q06525 465 aaKnown RBP3.22□□□□□ -1.89
SOK2YMR016C TAD3Q9URQ3 322 aa3.22□□□□□ -1.89
SOK2YMR016C CYC8P14922 966 aa3.22□□□□□ -1.89
SOK2YMR016C ASF1P32447 279 aa3.22□□□□□ -1.89
SOK2YMR016C YSC84P32793 468 aa3.22□□□□□ -1.89
SOK2YMR016C MET10P39692 1035 aa3.22□□□□□ -1.89
SOK2YMR016C RSM26P47141 266 aa3.22□□□□□ -1.89
SOK2YMR016C SPT20P50875 604 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms