RNA–Protein interactions for RNA: YLR298C

YHC1, Transcript of Component of the U1 snRNP complex required for pre-mRNA splicing, yeastyeast

Gene YHC1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHC1YLR298C HAT1Q12341 374 aa5.4□□□□□ -1.54
YHC1YLR298C UGA4P32837 571 aa5.39□□□□□ -1.55
YHC1YLR298C PRP40P33203 583 aaKnown RBP5.38□□□□□ -1.55
YHC1YLR298C MDL2P33311 773 aa5.38□□□□□ -1.55
YHC1YLR298C YJL045WP47052 634 aa5.38□□□□□ -1.55
YHC1YLR298C PEX13P80667 386 aa5.38□□□□□ -1.55
YHC1YLR298C HDA2Q06629 674 aa5.38□□□□□ -1.55
YHC1YLR298C HRK1Q08732 759 aaKnown RBP5.38□□□□□ -1.55
YHC1YLR298C SOD2P00447 233 aa5.37□□□□□ -1.55
YHC1YLR298C HSE1P38753 452 aa5.37□□□□□ -1.55
YHC1YLR298C YPL277CQ08989 487 aa5.37□□□□□ -1.55
YHC1YLR298C TOD6P34219 525 aa5.36□□□□□ -1.55
YHC1YLR298C GEF1P37020 779 aa5.36□□□□□ -1.55
YHC1YLR298C RSM26P47141 266 aa5.36□□□□□ -1.55
YHC1YLR298C YNR063WP53749 607 aa5.36□□□□□ -1.55
YHC1YLR298C LAP2Q10740 671 aa5.36□□□□□ -1.55
YHC1YLR298C VMA4P22203 233 aaKnown RBP5.35□□□□□ -1.55
YHC1YLR298C AIM26P32858 118 aa5.35□□□□□ -1.55
YHC1YLR298C FOL2P51601 243 aaKnown RBP5.35□□□□□ -1.55
YHC1YLR298C SNO2P53823 222 aa5.35□□□□□ -1.55
YHC1YLR298C ULP1Q02724 621 aa5.35□□□□□ -1.55
YHC1YLR298C RPS13P05756 151 aaKnown RBP5.34□□□□□ -1.55
YHC1YLR298C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
YHC1YLR298C SRO9P25567 434 aaKnown RBP5.34□□□□□ -1.55
YHC1YLR298C YHL050CP38721 697 aa5.34□□□□□ -1.55
YHC1YLR298C YHR219WP38900 624 aa5.34□□□□□ -1.55
YHC1YLR298C PHO4P07270 312 aaKnown RBP5.33□□□□□ -1.56
YHC1YLR298C QNS1P38795 714 aaKnown RBP5.33□□□□□ -1.56
YHC1YLR298C PEX28P38848 579 aa5.33□□□□□ -1.56
YHC1YLR298C DAL4Q04895 635 aa5.33□□□□□ -1.56
YHC1YLR298C TOS4Q06266 489 aa5.33□□□□□ -1.56
YHC1YLR298C SQT1P35184 431 aa5.32□□□□□ -1.56
YHC1YLR298C RDH54P38086 958 aa5.32□□□□□ -1.56
YHC1YLR298C ATG14P38270 344 aa5.32□□□□□ -1.56
YHC1YLR298C HEM13P11353 328 aaKnown RBP5.31□□□□□ -1.56
YHC1YLR298C KAR2P16474 682 aaKnown RBP5.31□□□□□ -1.56
YHC1YLR298C GCD6P32501 712 aaKnown RBP5.31□□□□□ -1.56
YHC1YLR298C YSC84P32793 468 aa5.31□□□□□ -1.56
YHC1YLR298C VPS35P34110 944 aa5.31□□□□□ -1.56
YHC1YLR298C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
YHC1YLR298C RKM2Q03942 479 aa5.31□□□□□ -1.56
YHC1YLR298C RSC58Q07979 502 aa5.31□□□□□ -1.56
YHC1YLR298C ADD66P36040 267 aa5.3□□□□□ -1.56
YHC1YLR298C CLU1Q03690 1277 aaKnown RBP5.3□□□□□ -1.56
YHC1YLR298C YDR132CQ03900 495 aa5.3□□□□□ -1.56
YHC1YLR298C RCL1Q08096 367 aaPredicted RBP5.3□□□□□ -1.56
YHC1YLR298C MET4P32389 672 aa5.29□□□□□ -1.56
YHC1YLR298C DAK2P43550 591 aa5.29□□□□□ -1.56
YHC1YLR298C VPS53P47061 822 aa5.29□□□□□ -1.56
YHC1YLR298C YGL140CP53120 1219 aa5.29□□□□□ -1.56
YHC1YLR298C SPS1P08458 490 aa5.28□□□□□ -1.56
YHC1YLR298C CTS1P29029 562 aa5.28□□□□□ -1.56
YHC1YLR298C AFG2P32794 780 aa5.28□□□□□ -1.56
YHC1YLR298C PRE10P21242 288 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
YHC1YLR298C YPL109CQ02981 657 aa5.27□□□□□ -1.57
YHC1YLR298C NBA1Q08229 501 aaKnown RBP5.27□□□□□ -1.57
YHC1YLR298C SEC23P15303 768 aaKnown RBP5.26□□□□□ -1.57
YHC1YLR298C KIP1P28742 1111 aa5.26□□□□□ -1.57
YHC1YLR298C PPX1P38698 397 aa5.26□□□□□ -1.57
YHC1YLR298C FAA3P39002 694 aa5.26□□□□□ -1.57
YHC1YLR298C GPB2P39717 880 aa5.26□□□□□ -1.57
YHC1YLR298C ADI1Q03677 179 aa5.26□□□□□ -1.57
YHC1YLR298C COQ4O13525 335 aa5.25□□□□□ -1.57
YHC1YLR298C YLR358CO13565 187 aa5.25□□□□□ -1.57
YHC1YLR298C SHM2P37291 469 aaKnown RBP5.25□□□□□ -1.57
YHC1YLR298C ENV11P53246 860 aa5.25□□□□□ -1.57
YHC1YLR298C EST2Q06163 884 aa5.25□□□□□ -1.57
YHC1YLR298C ABZ1P37254 787 aaPredicted RBP5.24□□□□□ -1.57
YHC1YLR298C BAP2P38084 609 aa5.24□□□□□ -1.57
YHC1YLR298C CCZ1P38273 704 aa5.24□□□□□ -1.57
YHC1YLR298C SSF1P38789 453 aaPredicted RBP5.24□□□□□ -1.57
YHC1YLR298C GSF2Q04697 403 aaKnown RBP5.24□□□□□ -1.57
YHC1YLR298C SGD1Q06132 899 aa5.24□□□□□ -1.57
YHC1YLR298C OXR1Q08952 273 aa5.24□□□□□ -1.57
YHC1YLR298C WHI5Q12416 295 aa5.24□□□□□ -1.57
YHC1YLR298C LAM1P38851 1228 aa5.23□□□□□ -1.57
YHC1YLR298C PIC2P40035 300 aa5.23□□□□□ -1.57
YHC1YLR298C SPT20P50875 604 aa5.23□□□□□ -1.57
YHC1YLR298C GCN5Q03330 439 aa5.23□□□□□ -1.57
YHC1YLR298C PTC5Q12511 572 aa5.23□□□□□ -1.57
YHC1YLR298C CYC1P00044 109 aaPredicted RBP5.22□□□□□ -1.57
YHC1YLR298C MEF2P39677 819 aa5.22□□□□□ -1.57
YHC1YLR298C TNA1P53322 534 aa5.22□□□□□ -1.57
YHC1YLR298C YOR352WQ08816 343 aa5.22□□□□□ -1.57
YHC1YLR298C HXK1P04806 485 aaKnown RBP5.21□□□□□ -1.58
YHC1YLR298C DED1P06634 604 aaKnown RBP5.21□□□□□ -1.58
YHC1YLR298C SNF5P18480 905 aa5.21□□□□□ -1.58
YHC1YLR298C ALG3P38179 458 aa5.21□□□□□ -1.58
YHC1YLR298C SEC26P41810 973 aaKnown RBP5.21□□□□□ -1.58
YHC1YLR298C HOS3Q02959 697 aaKnown RBP5.21□□□□□ -1.58
YHC1YLR298C SPO21Q12411 609 aa5.21□□□□□ -1.58
YHC1YLR298C TAT2P38967 592 aa5.2□□□□□ -1.58
YHC1YLR298C PIK1P39104 1066 aa5.2□□□□□ -1.58
YHC1YLR298C MSC6Q08818 692 aaKnown RBP5.2□□□□□ -1.58
YHC1YLR298C TUB2P02557 457 aaKnown RBP5.19□□□□□ -1.58
YHC1YLR298C ROT1Q03691 256 aa5.19□□□□□ -1.58
YHC1YLR298C RSB1Q08417 382 aa5.19□□□□□ -1.58
YHC1YLR298C RPT1P33299 467 aaKnown RBP5.18□□□□□ -1.58
YHC1YLR298C STM1P39015 273 aaKnown RBP5.18□□□□□ -1.58
YHC1YLR298C MPT5P39016 859 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
Retrieved 100 of 5,963 RNA–protein pairs in 105.6 ms