RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C DPS1P04802 557 aaKnown RBP2.21□□□□□ -2.06
HIR3YJR140C ARE1P25628 610 aa2.21□□□□□ -2.06
HIR3YJR140C NAB3P38996 802 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
HIR3YJR140C PMT3P47190 753 aa2.21□□□□□ -2.06
HIR3YJR140C CCP1P00431 361 aa2.21□□□□□ -2.06
HIR3YJR140C RDH54P38086 958 aa2.21□□□□□ -2.06
HIR3YJR140C GNP1P48813 663 aa2.21□□□□□ -2.06
HIR3YJR140C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
HIR3YJR140C EAF1Q06337 982 aa2.21□□□□□ -2.06
HIR3YJR140C MSH2P25847 964 aa2.21□□□□□ -2.06
HIR3YJR140C DOM34P33309 386 aa2.21□□□□□ -2.06
HIR3YJR140C DUT1P33317 147 aa2.21□□□□□ -2.06
HIR3YJR140C RTS3P53289 263 aa2.21□□□□□ -2.06
HIR3YJR140C KNS1P32350 737 aaPredicted RBP2.2□□□□□ -2.06
HIR3YJR140C NNK1P36003 928 aa2.2□□□□□ -2.06
HIR3YJR140C EXO5P38289 585 aa2.2□□□□□ -2.06
HIR3YJR140C YAR028WP39548 234 aa2.2□□□□□ -2.06
HIR3YJR140C DSE4P53753 1117 aa2.2□□□□□ -2.06
HIR3YJR140C CTR9P89105 1077 aa2.2□□□□□ -2.06
HIR3YJR140C GIC2Q06648 383 aa2.2□□□□□ -2.06
HIR3YJR140C YLL058WQ12198 575 aa2.2□□□□□ -2.06
HIR3YJR140C ADE8P04161 214 aa2.2□□□□□ -2.06
HIR3YJR140C INO1P11986 533 aa2.2□□□□□ -2.06
HIR3YJR140C SPP382Q06411 708 aaPredicted RBP2.2□□□□□ -2.06
HIR3YJR140C HDA2Q06629 674 aa2.2□□□□□ -2.06
HIR3YJR140C TY1A-DR3Q12441 440 aa2.2□□□□□ -2.06
HIR3YJR140C NSI1Q12457 570 aa2.2□□□□□ -2.06
HIR3YJR140C NOP14Q99207 810 aaKnown RBP2.2□□□□□ -2.06
HIR3YJR140C COQ4O13525 335 aa2.2□□□□□ -2.06
HIR3YJR140C RPL8BP29453 256 aaKnown RBP2.2□□□□□ -2.06
HIR3YJR140C MAE1P36013 669 aaKnown RBP2.2□□□□□ -2.06
HIR3YJR140C RSP5P39940 809 aaKnown RBP2.2□□□□□ -2.06
HIR3YJR140C EEB1Q02891 456 aa2.2□□□□□ -2.06
HIR3YJR140C AMN1P38285 549 aaPredicted RBP2.2□□□□□ -2.06
HIR3YJR140C YJR124CP47159 448 aa2.2□□□□□ -2.06
HIR3YJR140C CCM1P48237 864 aaPredicted RBP2.2□□□□□ -2.06
HIR3YJR140C YMR074CQ04773 145 aa2.2□□□□□ -2.06
HIR3YJR140C OPT2Q06593 877 aa2.2□□□□□ -2.06
HIR3YJR140C HVG1P0CE11 249 aa2.19□□□□□ -2.06
HIR3YJR140C SRM1P21827 482 aa2.19□□□□□ -2.06
HIR3YJR140C RER2P35196 286 aa2.19□□□□□ -2.06
HIR3YJR140C YKR078WP36158 585 aaKnown RBP2.19□□□□□ -2.06
HIR3YJR140C REI1P38344 393 aaPredicted RBP2.19□□□□□ -2.06
HIR3YJR140C PAF1P38351 445 aa2.19□□□□□ -2.06
HIR3YJR140C PRK1P40494 810 aa2.19□□□□□ -2.06
HIR3YJR140C CEF1Q03654 590 aaPredicted RBP2.19□□□□□ -2.06
HIR3YJR140C UTP5Q04177 643 aaKnown RBP2.19□□□□□ -2.06
HIR3YJR140C PEX6P33760 1030 aa2.19□□□□□ -2.06
HIR3YJR140C SIT1P39980 628 aa2.19□□□□□ -2.06
HIR3YJR140C NIT3P49954 291 aa2.19□□□□□ -2.06
HIR3YJR140C PAP2P53632 584 aaKnown RBP2.19□□□□□ -2.06
HIR3YJR140C ADE12P80210 433 aaKnown RBP2.19□□□□□ -2.06
HIR3YJR140C YOR223WQ12015 292 aa2.19□□□□□ -2.06
HIR3YJR140C DPH6Q12429 685 aa2.19□□□□□ -2.06
HIR3YJR140C PRI2P20457 528 aa2.19□□□□□ -2.06
HIR3YJR140C PUF4P25339 888 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
HIR3YJR140C MKK2P32491 506 aa2.19□□□□□ -2.06
HIR3YJR140C VBA5P36172 582 aa2.19□□□□□ -2.06
HIR3YJR140C MCM7P38132 845 aa2.19□□□□□ -2.06
HIR3YJR140C YBR184WP38299 523 aa2.19□□□□□ -2.06
HIR3YJR140C GUS1P46655 708 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
HIR3YJR140C DAM1P53267 343 aa2.19□□□□□ -2.06
HIR3YJR140C HAS1Q03532 505 aaKnown RBP2.19□□□□□ -2.06
HIR3YJR140C TY1A-DR2Q03964 440 aaKnown RBP2.19□□□□□ -2.06
HIR3YJR140C YOR059CQ08448 450 aaKnown RBP2.19□□□□□ -2.06
HIR3YJR140C AAR2P32357 355 aaPredicted RBP2.18□□□□□ -2.06
HIR3YJR140C CCZ1P38273 704 aa2.18□□□□□ -2.06
HIR3YJR140C YJL181WP46987 611 aa2.18□□□□□ -2.06
HIR3YJR140C TNA1P53322 534 aa2.18□□□□□ -2.06
HIR3YJR140C YNR040WP53736 256 aa2.18□□□□□ -2.06
HIR3YJR140C VPS30Q02948 557 aa2.18□□□□□ -2.06
HIR3YJR140C REH1Q06709 432 aa2.18□□□□□ -2.06
HIR3YJR140C NBA1Q08229 501 aaKnown RBP2.18□□□□□ -2.06
HIR3YJR140C ELG1Q12050 791 aa2.18□□□□□ -2.06
HIR3YJR140C PTC5Q12511 572 aa2.18□□□□□ -2.06
HIR3YJR140C TSR4P25040 408 aa2.18□□□□□ -2.06
HIR3YJR140C PPH3P32345 308 aa2.18□□□□□ -2.06
HIR3YJR140C CRP1P38845 465 aaKnown RBP2.18□□□□□ -2.06
HIR3YJR140C LSB6P42951 607 aa2.18□□□□□ -2.06
HIR3YJR140C ALR2P43553 858 aa2.18□□□□□ -2.06
HIR3YJR140C ROD1Q02805 837 aa2.18□□□□□ -2.06
HIR3YJR140C TY1A-MR1Q04215 440 aa2.18□□□□□ -2.06
HIR3YJR140C COBP00163 385 aa2.18□□□□□ -2.06
HIR3YJR140C CCC2P38995 1004 aa2.18□□□□□ -2.06
HIR3YJR140C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06 RIP-Chip
HIR3YJR140C UBX5Q06682 500 aa2.18□□□□□ -2.06
HIR3YJR140C TY1A-BLQ12266 440 aa2.18□□□□□ -2.06
HIR3YJR140C TOM70P07213 617 aaKnown RBP2.18□□□□□ -2.06
HIR3YJR140C TRZ1P36159 838 aaPredicted RBP2.18□□□□□ -2.06
HIR3YJR140C HXT13P39924 564 aa2.18□□□□□ -2.06
HIR3YJR140C ROG3P43602 733 aa2.18□□□□□ -2.06
HIR3YJR140C HLJ1P48353 224 aa2.18□□□□□ -2.06
HIR3YJR140C HXT17P53631 564 aa2.18□□□□□ -2.06
HIR3YJR140C HXT15P54854 567 aa2.18□□□□□ -2.06
HIR3YJR140C TAF8Q03750 510 aa2.18□□□□□ -2.06
HIR3YJR140C TIF35Q04067 274 aaKnown RBP2.18□□□□□ -2.06
HIR3YJR140C LCB5Q06147 687 aaKnown RBP2.18□□□□□ -2.06
HIR3YJR140C NHA1Q99271 985 aa2.18□□□□□ -2.06
HIR3YJR140C CAN1P04817 590 aa2.17□□□□□ -2.06
HIR3YJR140C TAT2P38967 592 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 71.3 ms