RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C HOS4P40480 1083 aa3.95□□□□□ -1.78
YIR040CYIR040C YGR045CP53229 120 aa3.95□□□□□ -1.78
YIR040CYIR040C PIL1P53252 339 aaKnown RBP3.95□□□□□ -1.78
YIR040CYIR040C PEX13P80667 386 aa3.95□□□□□ -1.78
YIR040CYIR040C GIC2Q06648 383 aa3.95□□□□□ -1.78
YIR040CYIR040C GLT1Q12680 2145 aaKnown RBP3.95□□□□□ -1.78
YIR040CYIR040C SPT7P35177 1332 aa3.95□□□□□ -1.78
YIR040CYIR040C FYV10P40492 516 aa3.94□□□□□ -1.78
YIR040CYIR040C SPO74P45819 413 aa3.94□□□□□ -1.78
YIR040CYIR040C TY4A-JP47023 414 aa3.94□□□□□ -1.78
YIR040CYIR040C RSM26P47141 266 aa3.94□□□□□ -1.78
YIR040CYIR040C YJR107WP47145 328 aa3.94□□□□□ -1.78
YIR040CYIR040C YGR130CP53278 816 aa3.94□□□□□ -1.78
YIR040CYIR040C TPO2P53283 614 aa3.94□□□□□ -1.78
YIR040CYIR040C ELA1P53861 379 aaPredicted RBP3.94□□□□□ -1.78
YIR040CYIR040C ADI1Q03677 179 aa3.94□□□□□ -1.78
YIR040CYIR040C YLL054CQ12244 843 aa3.94□□□□□ -1.78
YIR040CYIR040C YTA7P40340 1379 aa3.93□□□□□ -1.78
YIR040CYIR040C CHS2P14180 963 aa3.93□□□□□ -1.78
YIR040CYIR040C WHI3P34761 661 aaKnown RBP3.93□□□□□ -1.78
YIR040CYIR040C RDH54P38086 958 aa3.93□□□□□ -1.78
YIR040CYIR040C ARL1P38116 183 aaKnown RBP3.93□□□□□ -1.78
YIR040CYIR040C NMD2P38798 1089 aaKnown RBP3.93□□□□□ -1.78
YIR040CYIR040C SHU2P38957 223 aa3.93□□□□□ -1.78
YIR040CYIR040C RPS26AP39938 119 aaKnown RBP3.93□□□□□ -1.78
YIR040CYIR040C RPS26BP39939 119 aaKnown RBP3.93□□□□□ -1.78
YIR040CYIR040C MSH4P40965 878 aaPredicted RBP3.93□□□□□ -1.78
YIR040CYIR040C YGL140CP53120 1219 aa3.93□□□□□ -1.78
YIR040CYIR040C YGR122WP53272 402 aa3.93□□□□□ -1.78
YIR040CYIR040C EAR1Q03212 550 aa3.93□□□□□ -1.78
YIR040CYIR040C UTP5Q04177 643 aaKnown RBP3.93□□□□□ -1.78
YIR040CYIR040C CYC8P14922 966 aa3.92□□□□□ -1.78
YIR040CYIR040C MFT1P33441 392 aaKnown RBP3.92□□□□□ -1.78
YIR040CYIR040C SQT1P35184 431 aa3.92□□□□□ -1.78
YIR040CYIR040C MET10P39692 1035 aa3.92□□□□□ -1.78
YIR040CYIR040C INP52P50942 1183 aa3.92□□□□□ -1.78
YIR040CYIR040C DOS2P54858 310 aa3.92□□□□□ -1.78
YIR040CYIR040C SPR28Q04921 423 aa3.92□□□□□ -1.78
YIR040CYIR040C RAD2P07276 1031 aa3.91□□□□□ -1.78
YIR040CYIR040C GCD1P09032 578 aaPredicted RBP3.91□□□□□ -1.78
YIR040CYIR040C RPS4AP0CX35 261 aaKnown RBP3.91□□□□□ -1.78
YIR040CYIR040C RPS4BP0CX36 261 aaKnown RBP3.91□□□□□ -1.78
YIR040CYIR040C MSB1P21339 1137 aaKnown RBP3.91□□□□□ -1.78
YIR040CYIR040C SEC8P32855 1065 aa3.91□□□□□ -1.78
YIR040CYIR040C OMA1P36163 345 aa3.91□□□□□ -1.78
YIR040CYIR040C SEA4P38164 1038 aa3.91□□□□□ -1.78
YIR040CYIR040C TOS1P38288 455 aa3.91□□□□□ -1.78
YIR040CYIR040C MGE1P38523 228 aa3.91□□□□□ -1.78
YIR040CYIR040C MTR4P47047 1073 aaKnown RBP3.91□□□□□ -1.78
YIR040CYIR040C CTH1P47976 325 aa3.91□□□□□ -1.78
YIR040CYIR040C YSH1Q06224 779 aaPredicted RBP3.91□□□□□ -1.78
YIR040CYIR040C AVO1Q08236 1176 aa3.91□□□□□ -1.78
YIR040CYIR040C MED7Q08278 222 aa3.91□□□□□ -1.78
YIR040CYIR040C BUD21Q08492 214 aaPredicted RBP3.91□□□□□ -1.78
YIR040CYIR040C CYC7P00045 113 aa3.9□□□□□ -1.79
YIR040CYIR040C SEC23P15303 768 aaKnown RBP3.9□□□□□ -1.79
YIR040CYIR040C VMA4P22203 233 aaKnown RBP3.9□□□□□ -1.79
YIR040CYIR040C PRE9P23638 258 aaKnown RBP3.9□□□□□ -1.79
YIR040CYIR040C YAR028WP39548 234 aa3.9□□□□□ -1.79
YIR040CYIR040C XKS1P42826 600 aa3.9□□□□□ -1.79
YIR040CYIR040C ATG36P46983 293 aa3.9□□□□□ -1.79
YIR040CYIR040C YJR008WP47085 338 aa3.9□□□□□ -1.79
YIR040CYIR040C ALT1P52893 592 aa3.9□□□□□ -1.79
YIR040CYIR040C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
YIR040CYIR040C NFS1P25374 497 aa3.89□□□□□ -1.79
YIR040CYIR040C SMY2P32909 740 aaKnown RBP3.89□□□□□ -1.79
YIR040CYIR040C NMD3P38861 518 aaKnown RBP3.89□□□□□ -1.79
YIR040CYIR040C MMM1P41800 426 aa3.89□□□□□ -1.79
YIR040CYIR040C MRPS18P42847 217 aa3.89□□□□□ -1.79
YIR040CYIR040C ZDS1P50111 915 aaKnown RBP3.89□□□□□ -1.79
YIR040CYIR040C NRD1P53617 575 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
YIR040CYIR040C YNR063WP53749 607 aa3.89□□□□□ -1.79
YIR040CYIR040C SDH1Q00711 640 aa3.89□□□□□ -1.79
YIR040CYIR040C OYE2Q03558 400 aaKnown RBP3.89□□□□□ -1.79
YIR040CYIR040C FPR4Q06205 392 aaPredicted RBP3.89□□□□□ -1.79
YIR040CYIR040C INO80P53115 1489 aa3.88□□□□□ -1.79
YIR040CYIR040C PUB1P32588 453 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
YIR040CYIR040C AFG2P32794 780 aa3.88□□□□□ -1.79
YIR040CYIR040C MAC1P35192 417 aa3.88□□□□□ -1.79
YIR040CYIR040C AIM21P40563 679 aa3.88□□□□□ -1.79
YIR040CYIR040C OYE3P41816 400 aaPredicted RBP3.88□□□□□ -1.79
YIR040CYIR040C IES1P43579 692 aa3.88□□□□□ -1.79
YIR040CYIR040C CIT3P43635 486 aa3.88□□□□□ -1.79
YIR040CYIR040C RCM1P53972 490 aa3.88□□□□□ -1.79
YIR040CYIR040C MAG2Q06436 670 aaKnown RBP3.88□□□□□ -1.79
YIR040CYIR040C BRE1Q07457 700 aaKnown RBP3.88□□□□□ -1.79
YIR040CYIR040C BRE4Q07660 1125 aa3.88□□□□□ -1.79
YIR040CYIR040C MCD1Q12158 566 aa3.88□□□□□ -1.79
YIR040CYIR040C RET1P22276 1149 aaKnown RBP3.87□□□□□ -1.79
YIR040CYIR040C SPC110P32380 944 aa3.87□□□□□ -1.79
YIR040CYIR040C NNK1P36003 928 aa3.87□□□□□ -1.79
YIR040CYIR040C ADD66P36040 267 aa3.87□□□□□ -1.79
YIR040CYIR040C NOC2P39744 710 aaKnown RBP3.87□□□□□ -1.79
YIR040CYIR040C GNP1P48813 663 aa3.87□□□□□ -1.79
YIR040CYIR040C RSA3Q05942 220 aaKnown RBP3.87□□□□□ -1.79
YIR040CYIR040C YLR257WQ06146 321 aaKnown RBP3.87□□□□□ -1.79
YIR040CYIR040C EST2Q06163 884 aa3.87□□□□□ -1.79
YIR040CYIR040C HDA2Q06629 674 aa3.87□□□□□ -1.79
YIR040CYIR040C PUS7Q08647 676 aaKnown RBP3.87□□□□□ -1.79
YIR040CYIR040C APL5Q08951 932 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms