RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W YJR107WP47145 328 aa3.51□□□□□ -1.85
RPL40AYIL148W YGR045CP53229 120 aa3.51□□□□□ -1.85
RPL40AYIL148W UTP22P53254 1237 aaPredicted RBP3.51□□□□□ -1.85
RPL40AYIL148W ELA1P53861 379 aaPredicted RBP3.51□□□□□ -1.85
RPL40AYIL148W GPI13Q07830 1017 aa3.51□□□□□ -1.85
RPL40AYIL148W MNL2Q12205 849 aa3.51□□□□□ -1.85
RPL40AYIL148W CLN2P20438 545 aa3.5□□□□□ -1.85
RPL40AYIL148W PRE9P23638 258 aaKnown RBP3.5□□□□□ -1.85
RPL40AYIL148W SMY2P32909 740 aaKnown RBP3.5□□□□□ -1.85
RPL40AYIL148W RPS26AP39938 119 aaKnown RBP3.5□□□□□ -1.85
RPL40AYIL148W RPS26BP39939 119 aaKnown RBP3.5□□□□□ -1.85
RPL40AYIL148W RMD1Q03441 430 aa3.5□□□□□ -1.85
RPL40AYIL148W YCS4Q06156 1176 aa3.5□□□□□ -1.85
RPL40AYIL148W ESF1Q06344 628 aaKnown RBP3.5□□□□□ -1.85
RPL40AYIL148W RRP15Q06511 250 aaPredicted RBP3.5□□□□□ -1.85
RPL40AYIL148W YPL277CQ08989 487 aa3.5□□□□□ -1.85
RPL40AYIL148W SOD2P00447 233 aa3.49□□□□□ -1.85
RPL40AYIL148W SQT1P35184 431 aa3.49□□□□□ -1.85
RPL40AYIL148W ABZ1P37254 787 aaPredicted RBP3.49□□□□□ -1.85
RPL40AYIL148W MRPS18P42847 217 aa3.49□□□□□ -1.85
RPL40AYIL148W YGR122WP53272 402 aa3.49□□□□□ -1.85
RPL40AYIL148W GSF2Q04697 403 aaKnown RBP3.49□□□□□ -1.85
RPL40AYIL148W DAL4Q04895 635 aa3.49□□□□□ -1.85
RPL40AYIL148W FLP1P03870 423 aa3.48□□□□□ -1.85
RPL40AYIL148W RPS13P05756 151 aaKnown RBP3.48□□□□□ -1.85
RPL40AYIL148W MCM2P29469 868 aa3.48□□□□□ -1.85
RPL40AYIL148W PET112P33893 541 aa3.48□□□□□ -1.85
RPL40AYIL148W RVS167P39743 482 aaKnown RBP3.48□□□□□ -1.85
RPL40AYIL148W CWC24P53769 259 aa3.48□□□□□ -1.85
RPL40AYIL148W SPR28Q04921 423 aa3.48□□□□□ -1.85
RPL40AYIL148W PMT7Q06644 662 aa3.48□□□□□ -1.85
RPL40AYIL148W MCD1Q12158 566 aa3.48□□□□□ -1.85
RPL40AYIL148W TAD3Q9URQ3 322 aa3.48□□□□□ -1.85
RPL40AYIL148W TY1A-LR4P0C2I8 440 aaKnown RBP3.47□□□□□ -1.85
RPL40AYIL148W TY1A-DR6P0CX70 440 aa3.47□□□□□ -1.85
RPL40AYIL148W TY1A-ER1P0CX71 440 aa3.47□□□□□ -1.85
RPL40AYIL148W TY1A-LR2P0CX72 440 aa3.47□□□□□ -1.85
RPL40AYIL148W TY1A-PLP0CX73 440 aa3.47□□□□□ -1.85
RPL40AYIL148W TY1A-JR1P0CX74 440 aa3.47□□□□□ -1.85
RPL40AYIL148W TY1A-LR3P0CX75 440 aa3.47□□□□□ -1.85
RPL40AYIL148W TY1A-ML2P0CX76 440 aa3.47□□□□□ -1.85
RPL40AYIL148W MCM5P29496 775 aaKnown RBP3.47□□□□□ -1.85
RPL40AYIL148W NNK1P36003 928 aa3.47□□□□□ -1.85
RPL40AYIL148W SHM2P37291 469 aaKnown RBP3.47□□□□□ -1.85
RPL40AYIL148W ATG14P38270 344 aa3.47□□□□□ -1.85
RPL40AYIL148W SHU2P38957 223 aa3.47□□□□□ -1.85
RPL40AYIL148W FYV10P40492 516 aa3.47□□□□□ -1.85
RPL40AYIL148W RSM26P47141 266 aa3.47□□□□□ -1.85
RPL40AYIL148W MON1P53129 644 aa3.47□□□□□ -1.85
RPL40AYIL148W CLU1Q03690 1277 aaKnown RBP3.47□□□□□ -1.85
RPL40AYIL148W TY1A-GR1Q12085 440 aa3.47□□□□□ -1.85
RPL40AYIL148W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.47□□□□□ -1.85
RPL40AYIL148W TY1A-OLQ92392 440 aaKnown RBP3.47□□□□□ -1.85
RPL40AYIL148W RAD2P07276 1031 aa3.46□□□□□ -1.86
RPL40AYIL148W PRP40P33203 583 aaKnown RBP3.46□□□□□ -1.86
RPL40AYIL148W TPP1Q03796 238 aa3.46□□□□□ -1.86
RPL40AYIL148W AVO1Q08236 1176 aa3.46□□□□□ -1.86
RPL40AYIL148W PUS7Q08647 676 aaKnown RBP3.46□□□□□ -1.86
RPL40AYIL148W CYC8P14922 966 aa3.45□□□□□ -1.86
RPL40AYIL148W CTS1P29029 562 aa3.45□□□□□ -1.86
RPL40AYIL148W MNR2P35724 969 aa3.45□□□□□ -1.86
RPL40AYIL148W NMD3P38861 518 aaKnown RBP3.45□□□□□ -1.86
RPL40AYIL148W NUT1P53114 1132 aa3.45□□□□□ -1.86
RPL40AYIL148W WRS1Q12109 432 aaKnown RBP3.45□□□□□ -1.86
RPL40AYIL148W TUB2P02557 457 aaKnown RBP3.44□□□□□ -1.86
RPL40AYIL148W SAM35P14693 329 aa3.44□□□□□ -1.86
RPL40AYIL148W RAD27P26793 382 aa3.44□□□□□ -1.86
RPL40AYIL148W SAP155P43612 1002 aa3.44□□□□□ -1.86
RPL40AYIL148W HXK1P04806 485 aaKnown RBP3.43□□□□□ -1.86
RPL40AYIL148W PRE10P21242 288 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
RPL40AYIL148W YKL077WP36081 392 aa3.43□□□□□ -1.86
RPL40AYIL148W FAA3P39002 694 aa3.43□□□□□ -1.86
RPL40AYIL148W VAC8P39968 578 aa3.43□□□□□ -1.86
RPL40AYIL148W KRI1P42846 591 aaKnown RBP3.43□□□□□ -1.86
RPL40AYIL148W NNF1P47149 201 aa3.43□□□□□ -1.86
RPL40AYIL148W SNO2P53823 222 aa3.43□□□□□ -1.86
RPL40AYIL148W PEX13P80667 386 aa3.43□□□□□ -1.86
RPL40AYIL148W ULP1Q02724 621 aa3.43□□□□□ -1.86
RPL40AYIL148W ADI1Q03677 179 aa3.43□□□□□ -1.86
RPL40AYIL148W YLR358CO13565 187 aa3.42□□□□□ -1.86
RPL40AYIL148W ARL1P38116 183 aaKnown RBP3.42□□□□□ -1.86
RPL40AYIL148W YHL012WP38709 493 aa3.42□□□□□ -1.86
RPL40AYIL148W SLS1P42900 643 aa3.42□□□□□ -1.86
RPL40AYIL148W YAF9P53930 226 aa3.42□□□□□ -1.86
RPL40AYIL148W PIN2Q12057 282 aa3.42□□□□□ -1.86
RPL40AYIL148W PNS1Q12412 539 aa3.42□□□□□ -1.86
RPL40AYIL148W ALD6P54115 500 aaKnown RBP3.41□□□□□ -1.86
RPL40AYIL148W YPL109CQ02981 657 aa3.41□□□□□ -1.86
RPL40AYIL148W MRL1Q06815 381 aa3.41□□□□□ -1.86
RPL40AYIL148W TMA46Q12000 345 aaKnown RBP3.41□□□□□ -1.86
RPL40AYIL148W UGA4P32837 571 aa3.4□□□□□ -1.87
RPL40AYIL148W YPT53P36019 220 aa3.4□□□□□ -1.87
RPL40AYIL148W EXO5P38289 585 aa3.4□□□□□ -1.87
RPL40AYIL148W PEX28P38848 579 aa3.4□□□□□ -1.87
RPL40AYIL148W MTR4P47047 1073 aaKnown RBP3.4□□□□□ -1.87
RPL40AYIL148W FOL2P51601 243 aaKnown RBP3.4□□□□□ -1.87
RPL40AYIL148W GDE1Q02979 1223 aa3.4□□□□□ -1.87
RPL40AYIL148W VPS16Q03308 798 aa3.4□□□□□ -1.87
RPL40AYIL148W YDR132CQ03900 495 aa3.4□□□□□ -1.87
RPL40AYIL148W TAF13P11747 167 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms