RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	BEM4	P39011	633 aa		2.44	□□□□□ -2.02
STH1	YIL126W	ATG3	P40344	310 aa		2.44	□□□□□ -2.02
STH1	YIL126W	MPH1	P40562	993 aa		2.44	□□□□□ -2.02
STH1	YIL126W	REF2	P42073	533 aa	Predicted RBP	2.44	□□□□□ -2.02
STH1	YIL126W	VPS62	P53285	467 aa		2.44	□□□□□ -2.02
STH1	YIL126W	COP1	P53622	1201 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	FAR11	P53917	953 aa		2.44	□□□□□ -2.02
STH1	YIL126W	SYH1	Q02875	849 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	RRB1	Q04225	511 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	ARR1	Q06596	294 aa		2.44	□□□□□ -2.02
STH1	YIL126W	AVO1	Q08236	1176 aa		2.44	□□□□□ -2.02
STH1	YIL126W	HFI1	Q12060	488 aa		2.44	□□□□□ -2.02
STH1	YIL126W	DPH6	Q12429	685 aa		2.44	□□□□□ -2.02
STH1	YIL126W	COB	P00163	385 aa		2.44	□□□□□ -2.02
STH1	YIL126W	SCJ1	P25303	377 aa		2.44	□□□□□ -2.02
STH1	YIL126W	CDC60	P26637	1090 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	GRS1	P38088	690 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	SHE3	P38272	425 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	BRL1	P38770	471 aa		2.44	□□□□□ -2.02
STH1	YIL126W	UBP12	P39538	1254 aa		2.44	□□□□□ -2.02
STH1	YIL126W	YEL023C	P39992	682 aa		2.44	□□□□□ -2.02
STH1	YIL126W	NET1	P47035	1189 aa		2.44	□□□□□ -2.02
STH1	YIL126W	TEA1	P47988	759 aa		2.44	□□□□□ -2.02
STH1	YIL126W	YGR273C	P53329	174 aa		2.44	□□□□□ -2.02
STH1	YIL126W	MFB1	Q04922	465 aa		2.44	□□□□□ -2.02
STH1	YIL126W	MRD1	Q06106	887 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	BMS1	Q08965	1183 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	BRR1	Q99177	341 aa	Predicted RBP	2.44	□□□□□ -2.02
STH1	YIL126W	PBS2	P08018	668 aa		2.44	□□□□□ -2.02
STH1	YIL126W	SWI3	P32591	825 aa		2.44	□□□□□ -2.02
STH1	YIL126W	TCA17	P32613	152 aa		2.44	□□□□□ -2.02
STH1	YIL126W	NIT1	P40447	199 aa		2.44	□□□□□ -2.02
STH1	YIL126W	YGL140C	P53120	1219 aa		2.44	□□□□□ -2.02
STH1	YIL126W	YMR265C	Q03508	461 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	THI22	Q06490	572 aa		2.44	□□□□□ -2.02
STH1	YIL126W	YCG1	Q06680	1035 aa		2.44	□□□□□ -2.02
STH1	YIL126W	TSR1	Q07381	788 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	RRP6	Q12149	733 aa	Known RBP	2.44	□□□□□ -2.02
STH1	YIL126W	NKP1	Q12493	238 aa		2.44	□□□□□ -2.02
STH1	YIL126W	LDB19	Q12502	818 aa		2.44	□□□□□ -2.02
STH1	YIL126W	PCT1	P13259	424 aa		2.43	□□□□□ -2.02
STH1	YIL126W	SPT16	P32558	1035 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	SEC61	P32915	480 aa		2.43	□□□□□ -2.02
STH1	YIL126W	YEL1	P34225	687 aa		2.43	□□□□□ -2.02
STH1	YIL126W	PEX5	P35056	612 aa		2.43	□□□□□ -2.02
STH1	YIL126W	SIP3	P38717	1229 aa		2.43	□□□□□ -2.02
STH1	YIL126W	SAP1	P39955	897 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	RPN3	P40016	523 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	GID8	P40208	455 aa		2.43	□□□□□ -2.02
STH1	YIL126W	YTA6	P40328	754 aa		2.43	□□□□□ -2.02
STH1	YIL126W	CLA4	P48562	842 aa		2.43	□□□□□ -2.02
STH1	YIL126W	ERV41	Q04651	352 aa		2.43	□□□□□ -2.02
STH1	YIL126W	RRP15	Q06511	250 aa	Predicted RBP	2.43	□□□□□ -2.02
STH1	YIL126W	RVB2	Q12464	471 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	RPP1B	P10622	106 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	ERG7	P38604	731 aa		2.43	□□□□□ -2.02
STH1	YIL126W	SIT1	P39980	628 aa		2.43	□□□□□ -2.02
STH1	YIL126W	TFG1	P41895	735 aa	Predicted RBP	2.43	□□□□□ -2.02
STH1	YIL126W	YNR061C	P53747	219 aa		2.43	□□□□□ -2.02
STH1	YIL126W	HRQ1	Q05549	1077 aa		2.43	□□□□□ -2.02
STH1	YIL126W	UTP4	Q06679	776 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	LSP1	Q12230	341 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	AI4	P03878	556 aa		2.43	□□□□□ -2.02
STH1	YIL126W	CBP1	P07252	654 aa		2.43	□□□□□ -2.02
STH1	YIL126W	MPH3	P0CE00	602 aa		2.43	□□□□□ -2.02
STH1	YIL126W	MSP1	P28737	362 aa		2.43	□□□□□ -2.02
STH1	YIL126W	ACP1	P32463	125 aa		2.43	□□□□□ -2.02
STH1	YIL126W	RTG1	P32607	177 aa		2.43	□□□□□ -2.02
STH1	YIL126W	RTT107	P38850	1070 aa		2.43	□□□□□ -2.02
STH1	YIL126W	GPB2	P39717	880 aa		2.43	□□□□□ -2.02
STH1	YIL126W	YFR018C	P43599	363 aa		2.43	□□□□□ -2.02
STH1	YIL126W	APL6	P46682	809 aa		2.43	□□□□□ -2.02
STH1	YIL126W	PRP31	P49704	494 aa	Predicted RBP	2.43	□□□□□ -2.02
STH1	YIL126W	CNM67	P53865	581 aa	Known RBP	2.43	□□□□□ -2.02
STH1	YIL126W	YNL108C	P53929	270 aa		2.43	□□□□□ -2.02
STH1	YIL126W	VPS64	Q03944	604 aa		2.43	□□□□□ -2.02
STH1	YIL126W	SYF1	Q04048	859 aa	Predicted RBP	2.43	□□□□□ -2.02
STH1	YIL126W	LCD1	Q04377	747 aa		2.43	□□□□□ -2.02
STH1	YIL126W	NBL1	Q3E7Y6	73 aa		2.43	□□□□□ -2.02
STH1	YIL126W	MAK16	P10962	306 aa	Predicted RBP	2.42	□□□□□ -2.02
STH1	YIL126W	VMA2	P16140	517 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	SSF1	P38789	453 aa	Predicted RBP	2.42	□□□□□ -2.02
STH1	YIL126W	SOL3	P38858	249 aa		2.42	□□□□□ -2.02
STH1	YIL126W	HMF1	P40037	129 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	RSM25	P40496	264 aa		2.42	□□□□□ -2.02
STH1	YIL126W	GYP8	P43570	497 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SET2	P46995	733 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	SRB7	P47822	140 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SOL4	P53315	255 aa		2.42	□□□□□ -2.02
STH1	YIL126W	NOC3	Q07896	663 aa	Predicted RBP	2.42	□□□□□ -2.02
STH1	YIL126W	RUD3	Q12234	484 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	PHM7	Q12252	991 aa		2.42	□□□□□ -2.02
STH1	YIL126W	AHC1	Q12433	566 aa		2.42	□□□□□ -2.02
STH1	YIL126W	CSR2	Q12734	1121 aa		2.42	□□□□□ -2.02
STH1	YIL126W	NOP14	Q99207	810 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	YSP2	Q06681	1438 aa		2.42	□□□□□ -2.02
STH1	YIL126W	NOT3	P06102	836 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	RGT1	P32862	1170 aa		2.42	□□□□□ -2.02
STH1	YIL126W	TIF3	P34167	436 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	2.42	□□□□□ -2.02	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms