RNA–Protein interactions for RNA: YIL011W

TIR3, Transcript of Cell wall mannoprotein, yeast

Gene TIR3, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR3	YIL011W	ELM1	P32801	640 aa		11.32	□□□□□ -0.6
TIR3	YIL011W	RVS167	P39743	482 aa	Known RBP	11.32	□□□□□ -0.6
TIR3	YIL011W	ASE1	P50275	885 aa		11.32	□□□□□ -0.6
TIR3	YIL011W	YML037C	Q03703	340 aa		11.32	□□□□□ -0.6
TIR3	YIL011W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.32	□□□□□ -0.6	not detected
TIR3	YIL011W	DID4	P36108	232 aa		11.31	□□□□□ -0.6
TIR3	YIL011W	BNI5	P53890	448 aa	Known RBP	11.31	□□□□□ -0.6
TIR3	YIL011W	TYW1	Q08960	810 aa	Known RBP	11.31	□□□□□ -0.6
TIR3	YIL011W	TIP41	Q12199	356 aa		11.31	□□□□□ -0.6
TIR3	YIL011W	MYO1	P08964	1928 aa		11.31	□□□□□ -0.6
TIR3	YIL011W	FBP1	P09201	348 aa		11.3	□□□□□ -0.6
TIR3	YIL011W	CLC1	P17891	233 aa		11.3	□□□□□ -0.6
TIR3	YIL011W	VAB2	P40003	282 aa		11.3	□□□□□ -0.6
TIR3	YIL011W	CSM3	Q04659	317 aa		11.3	□□□□□ -0.6
TIR3	YIL011W	EIS1	Q05050	843 aa	Known RBP	11.3	□□□□□ -0.6
TIR3	YIL011W	YOR296W	Q08748	1289 aa		11.3	□□□□□ -0.6
TIR3	YIL011W	THR4	P16120	514 aa	Known RBP	11.29	□□□□□ -0.6
TIR3	YIL011W	RPN12	P32496	274 aa		11.29	□□□□□ -0.6
TIR3	YIL011W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.29	□□□□□ -0.6	not detected
TIR3	YIL011W	RFT1	P38206	574 aa	Predicted RBP	11.29	□□□□□ -0.6
TIR3	YIL011W	RTC4	P53850	401 aa		11.29	□□□□□ -0.6
TIR3	YIL011W	DDP1	Q99321	188 aa	Known RBP	11.29	□□□□□ -0.6
TIR3	YIL011W	RAD18	P10862	487 aa		11.28	□□□□□ -0.6
TIR3	YIL011W	PER1	P25625	357 aa		11.28	□□□□□ -0.6
TIR3	YIL011W	MCD4	P36051	919 aa		11.28	□□□□□ -0.6
TIR3	YIL011W	YJL007C	P47080	104 aa		11.28	□□□□□ -0.6
TIR3	YIL011W	FMS1	P50264	508 aa		11.28	□□□□□ -0.6
TIR3	YIL011W	DSE4	P53753	1117 aa		11.28	□□□□□ -0.6
TIR3	YIL011W	TRS120	Q04183	1289 aa		11.28	□□□□□ -0.6
TIR3	YIL011W	YDJ1	P25491	409 aa	Known RBP	11.27	□□□□□ -0.61
TIR3	YIL011W	URA1	P28272	314 aa	Predicted RBP	11.27	□□□□□ -0.61
TIR3	YIL011W	PHO88	P38264	188 aa	Predicted RBP	11.27	□□□□□ -0.61
TIR3	YIL011W	RET3	P53600	189 aa		11.27	□□□□□ -0.61
TIR3	YIL011W	ALG1	P16661	449 aa		11.26	□□□□□ -0.61
TIR3	YIL011W	BSD2	P38356	321 aa		11.26	□□□□□ -0.61
TIR3	YIL011W	NDT80	P38830	627 aa		11.26	□□□□□ -0.61
TIR3	YIL011W	STT3	P39007	718 aa	Known RBP	11.26	□□□□□ -0.61
TIR3	YIL011W	VMS1	Q04311	632 aa	Known RBP	11.26	□□□□□ -0.61
TIR3	YIL011W	SLK19	Q08581	821 aa	Known RBP	11.26	□□□□□ -0.61
TIR3	YIL011W	OXR1	Q08952	273 aa		11.26	□□□□□ -0.61
TIR3	YIL011W	PTC5	Q12511	572 aa		11.26	□□□□□ -0.61
TIR3	YIL011W	YKT6	P36015	200 aa	Known RBP	11.25	□□□□□ -0.61
TIR3	YIL011W	YER130C	P39959	443 aa		11.25	□□□□□ -0.61
TIR3	YIL011W	NET1	P47035	1189 aa		11.25	□□□□□ -0.61
TIR3	YIL011W	YPT11	P48559	417 aa		11.25	□□□□□ -0.61
TIR3	YIL011W	MMR1	Q06324	491 aa		11.25	□□□□□ -0.61
TIR3	YIL011W	UBX5	Q06682	500 aa		11.25	□□□□□ -0.61
TIR3	YIL011W	TUF1	P02992	437 aa	Known RBP	11.24	□□□□□ -0.61
TIR3	YIL011W	SRO9	P25567	434 aa	Known RBP	11.24	□□□□□ -0.61
TIR3	YIL011W	MCM4	P30665	933 aa	Known RBP	11.24	□□□□□ -0.61
TIR3	YIL011W	YKR018C	P36114	725 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	SUL1	P38359	859 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	PAN5	P38787	379 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	CIT3	P43635	486 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	SDA1	P53313	767 aa	Known RBP	11.24	□□□□□ -0.61
TIR3	YIL011W	JIP4	Q03361	876 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	SGD1	Q06132	899 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	RKM4	Q12504	494 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	TRS33	Q99394	268 aa		11.24	□□□□□ -0.61
TIR3	YIL011W	SES1	P07284	462 aa	Known RBP	11.23	□□□□□ -0.61
TIR3	YIL011W	GPA1	P08539	472 aa		11.23	□□□□□ -0.61
TIR3	YIL011W	SAM1	P10659	382 aa	Known RBP	11.23	□□□□□ -0.61
TIR3	YIL011W	GSY1	P23337	708 aa		11.23	□□□□□ -0.61
TIR3	YIL011W	MCM3	P24279	971 aa	Known RBP	11.23	□□□□□ -0.61
TIR3	YIL011W	NPR3	P38742	1146 aa		11.23	□□□□□ -0.61
TIR3	YIL011W	CUE3	P53137	624 aa	Known RBP	11.23	□□□□□ -0.61
TIR3	YIL011W	YGR273C	P53329	174 aa		11.23	□□□□□ -0.61
TIR3	YIL011W	KRE33	P53914	1056 aa	Known RBP	11.23	□□□□□ -0.61
TIR3	YIL011W	ALD6	P54115	500 aa	Known RBP	11.23	□□□□□ -0.61
TIR3	YIL011W	AIM33	Q04516	312 aa		11.23	□□□□□ -0.61
TIR3	YIL011W	HIS4	P00815	799 aa	Known RBP	11.22	□□□□□ -0.61
TIR3	YIL011W	HVG1	P0CE11	249 aa		11.22	□□□□□ -0.61
TIR3	YIL011W	VMA2	P16140	517 aa	Known RBP	11.22	□□□□□ -0.61
TIR3	YIL011W	BMH1	P29311	267 aa	Known RBP	11.22	□□□□□ -0.61
TIR3	YIL011W	ORC6	P38826	435 aa		11.22	□□□□□ -0.61
TIR3	YIL011W	RSC1	P53236	928 aa		11.22	□□□□□ -0.61
TIR3	YIL011W	RBA50	Q04418	439 aa		11.22	□□□□□ -0.61
TIR3	YIL011W	CFT2	Q12102	859 aa	Predicted RBP	11.22	□□□□□ -0.61
TIR3	YIL011W	KNS1	P32350	737 aa	Predicted RBP	11.21	□□□□□ -0.61
TIR3	YIL011W	TGL1	P34163	548 aa		11.21	□□□□□ -0.61
TIR3	YIL011W	ATG32	P40458	529 aa		11.21	□□□□□ -0.61
TIR3	YIL011W	LIF1	P53150	421 aa		11.21	□□□□□ -0.61
TIR3	YIL011W	YAF9	P53930	226 aa		11.21	□□□□□ -0.61
TIR3	YIL011W	OYE2	Q03558	400 aa	Known RBP	11.21	□□□□□ -0.61
TIR3	YIL011W	TMA64	Q04600	565 aa	Known RBP	11.21	□□□□□ -0.61
TIR3	YIL011W	SPH1	Q06160	661 aa		11.21	□□□□□ -0.61
TIR3	YIL011W	YLH47	Q06493	454 aa		11.21	□□□□□ -0.61
TIR3	YIL011W	CDC15	P27636	974 aa		11.2	□□□□□ -0.62
TIR3	YIL011W	SAC6	P32599	642 aa	Known RBP	11.2	□□□□□ -0.62
TIR3	YIL011W	UGA4	P32837	571 aa		11.2	□□□□□ -0.62
TIR3	YIL011W	GAA1	P39012	614 aa		11.2	□□□□□ -0.62
TIR3	YIL011W	YGR153W	P48238	217 aa		11.2	□□□□□ -0.62
TIR3	YIL011W	MFM1	Q02783	413 aa		11.2	□□□□□ -0.62
TIR3	YIL011W	PSR2	Q07949	397 aa		11.2	□□□□□ -0.62
TIR3	YIL011W	ILV1	P00927	576 aa	Known RBP	11.19	□□□□□ -0.62
TIR3	YIL011W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.19	□□□□□ -0.62	not detected
TIR3	YIL011W	RPL22A	P05749	121 aa	Known RBP	11.19	□□□□□ -0.62
TIR3	YIL011W	UTR4	P32626	227 aa		11.19	□□□□□ -0.62
TIR3	YIL011W	RKM3	P38222	552 aa		11.19	□□□□□ -0.62
TIR3	YIL011W	RRM3	P38766	723 aa		11.19	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 132.3 ms