RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BCD1	YHR040W	APC11	Q12157	165 aa		4.17	□□□□□ -1.74
BCD1	YHR040W	MSN1	P22148	382 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	MET4	P32389	672 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	PPG1	P32838	368 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	BSD2	P38356	321 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	SAP155	P43612	1002 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	HEH2	Q03281	663 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	RMD1	Q03441	430 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	MNL2	Q12205	849 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	FRT1	Q99332	602 aa		4.16	□□□□□ -1.74
BCD1	YHR040W	RPS24A	P0CX31	135 aa	Known RBP	4.15	□□□□□ -1.75
BCD1	YHR040W	RPS24B	P0CX32	135 aa	Known RBP	4.15	□□□□□ -1.75
BCD1	YHR040W	TRK2	P28584	889 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	SRP40	P32583	406 aa	Predicted RBP	4.15	□□□□□ -1.75
BCD1	YHR040W	SWE1	P32944	819 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	AKL1	P38080	1108 aa	Known RBP	4.15	□□□□□ -1.75
BCD1	YHR040W	RAD55	P38953	406 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	VAC8	P39968	578 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	YJR008W	P47085	338 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	JJJ3	P47138	172 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	YNL050C	P53952	270 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	ALD3	P54114	506 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	UFD2	P54860	961 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	HIM1	Q06674	414 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	UBX5	Q06682	500 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	SNF2	P22082	1703 aa		4.15	□□□□□ -1.75
BCD1	YHR040W	EDE1	P34216	1381 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
BCD1	YHR040W	TOM20	P35180	183 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	FYV10	P40492	516 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	IOC3	P43596	787 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	GYP7	P48365	746 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	ZDS1	P50111	915 aa	Known RBP	4.14	□□□□□ -1.75
BCD1	YHR040W	RRP46	P53256	223 aa	Predicted RBP	4.14	□□□□□ -1.75
BCD1	YHR040W	YNR040W	P53736	256 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	ALD6	P54115	500 aa	Known RBP	4.14	□□□□□ -1.75
BCD1	YHR040W	VPS16	Q03308	798 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	THI22	Q06490	572 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	PIN2	Q12057	282 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	AUS1	Q08409	1394 aa		4.14	□□□□□ -1.75
BCD1	YHR040W	CIT2	P08679	460 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
BCD1	YHR040W	CLN2	P20438	545 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	YKL091C	P33324	310 aa	Known RBP	4.13	□□□□□ -1.75
BCD1	YHR040W	AIM46	P38885	310 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	NTA1	P40354	457 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	MAD1	P40957	749 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	ITC1	P53125	1264 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	ALG12	P53730	551 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	RPN4	Q03465	531 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	TY1A-DR2	Q03964	440 aa	Known RBP	4.13	□□□□□ -1.75
BCD1	YHR040W	TRS120	Q04183	1289 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	NSE3	Q05541	303 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	AOS1	Q06624	347 aa		4.13	□□□□□ -1.75
BCD1	YHR040W	SSF2	Q12153	453 aa	Predicted RBP	4.13	□□□□□ -1.75
BCD1	YHR040W	IRS4	P36115	615 aa	Known RBP	4.12	□□□□□ -1.75
BCD1	YHR040W	MSC7	P38694	644 aa		4.12	□□□□□ -1.75
BCD1	YHR040W	YIL092W	P40497	633 aa		4.12	□□□□□ -1.75
BCD1	YHR040W	DSD1	P53095	428 aa		4.12	□□□□□ -1.75
BCD1	YHR040W	EAF7	P53911	425 aa	Known RBP	4.12	□□□□□ -1.75
BCD1	YHR040W	HEF3	P53978	1044 aa	Known RBP	4.12	□□□□□ -1.75
BCD1	YHR040W	VPS72	Q03388	795 aa		4.12	□□□□□ -1.75
BCD1	YHR040W	RSC2	Q06488	889 aa		4.12	□□□□□ -1.75
BCD1	YHR040W	DAL5	P15365	543 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	PRP5	P21372	849 aa	Predicted RBP	4.11	□□□□□ -1.75
BCD1	YHR040W	KTR2	P33550	425 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	PSY2	P40164	858 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	YIL165C	P40446	119 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	YIR014W	P40570	242 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	RGD2	P43556	714 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	YGL081W	P53156	320 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	POB3	Q04636	552 aa	Known RBP	4.11	□□□□□ -1.75
BCD1	YHR040W	RTT109	Q07794	436 aa		4.11	□□□□□ -1.75
BCD1	YHR040W	TIF6	Q12522	245 aa	Known RBP	4.11	□□□□□ -1.75
BCD1	YHR040W	GPM1	P00950	247 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	PHO4	P07270	312 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	PDC5	P16467	563 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	TSR4	P25040	408 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	HSP104	P31539	908 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	KNS1	P32350	737 aa	Predicted RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	ECM2	P38241	364 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	FUN12	P39730	1002 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	YER156C	P40093	338 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	PRK1	P40494	810 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	BUD6	P41697	788 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	PPT1	P53043	513 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	YNL011C	P53980	444 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
BCD1	YHR040W	MEC3	Q02574	474 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	EMG1	Q06287	252 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	SLM3	Q12093	417 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	WRS1	Q12109	432 aa	Known RBP	4.1	□□□□□ -1.75
BCD1	YHR040W	LYS2	P07702	1392 aa		4.1	□□□□□ -1.75
BCD1	YHR040W	AI1	P03875	834 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	SSB1	P11484	613 aa	Known RBP	4.09	□□□□□ -1.75
BCD1	YHR040W	IDI1	P15496	288 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	KCC4	P25389	1037 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	PRP45	P28004	379 aa	Predicted RBP	4.09	□□□□□ -1.75
BCD1	YHR040W	GCD6	P32501	712 aa	Known RBP	4.09	□□□□□ -1.75
BCD1	YHR040W	RPT1	P33299	467 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms