RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeast

Gene SLX9, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX9	YGR081C	EAR1	Q03212	550 aa		4.99	□□□□□ -1.61
SLX9	YGR081C	GCD1	P09032	578 aa	Predicted RBP	4.98	□□□□□ -1.61
SLX9	YGR081C	NFS1	P25374	497 aa		4.98	□□□□□ -1.61
SLX9	YGR081C	CTH1	P47976	325 aa		4.98	□□□□□ -1.61
SLX9	YGR081C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	RIP-Chip
SLX9	YGR081C	MAG2	Q06436	670 aa	Known RBP	4.98	□□□□□ -1.61
SLX9	YGR081C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SLX9	YGR081C	NNK1	P36003	928 aa		4.97	□□□□□ -1.61
SLX9	YGR081C	SEA4	P38164	1038 aa		4.97	□□□□□ -1.61
SLX9	YGR081C	OYE3	P41816	400 aa	Predicted RBP	4.97	□□□□□ -1.61
SLX9	YGR081C	MRPS18	P42847	217 aa		4.97	□□□□□ -1.61
SLX9	YGR081C	GNP1	P48813	663 aa		4.97	□□□□□ -1.61
SLX9	YGR081C	RKM2	Q03942	479 aa		4.97	□□□□□ -1.61
SLX9	YGR081C	GLT1	Q12680	2145 aa	Known RBP	4.97	□□□□□ -1.61
SLX9	YGR081C	TAF13	P11747	167 aa		4.96	□□□□□ -1.62
SLX9	YGR081C	SEC8	P32855	1065 aa		4.96	□□□□□ -1.62
SLX9	YGR081C	SDH1	Q00711	640 aa		4.96	□□□□□ -1.62
SLX9	YGR081C	RSA3	Q05942	220 aa	Known RBP	4.96	□□□□□ -1.62
SLX9	YGR081C	HDA2	Q06629	674 aa		4.96	□□□□□ -1.62
SLX9	YGR081C	BRE4	Q07660	1125 aa		4.96	□□□□□ -1.62
SLX9	YGR081C	YOR059C	Q08448	450 aa	Known RBP	4.96	□□□□□ -1.62
SLX9	YGR081C	AFG2	P32794	780 aa		4.95	□□□□□ -1.62
SLX9	YGR081C	LIP5	P32875	414 aa		4.95	□□□□□ -1.62
SLX9	YGR081C	ADD66	P36040	267 aa		4.95	□□□□□ -1.62
SLX9	YGR081C	RCM1	P53972	490 aa		4.95	□□□□□ -1.62
SLX9	YGR081C	YLR257W	Q06146	321 aa	Known RBP	4.95	□□□□□ -1.62
SLX9	YGR081C	ESF1	Q06344	628 aa	Known RBP	4.95	□□□□□ -1.62
SLX9	YGR081C	PUS7	Q08647	676 aa	Known RBP	4.95	□□□□□ -1.62
SLX9	YGR081C	YVC1	Q12324	675 aa		4.95	□□□□□ -1.62
SLX9	YGR081C	YNR063W	P53749	607 aa		4.94	□□□□□ -1.62
SLX9	YGR081C	OYE2	Q03558	400 aa	Known RBP	4.94	□□□□□ -1.62
SLX9	YGR081C	TPP1	Q03796	238 aa		4.94	□□□□□ -1.62
SLX9	YGR081C	EST2	Q06163	884 aa		4.94	□□□□□ -1.62
SLX9	YGR081C	LAP2	Q10740	671 aa		4.94	□□□□□ -1.62
SLX9	YGR081C	RET1	P22276	1149 aa	Known RBP	4.93	□□□□□ -1.62
SLX9	YGR081C	HSE1	P38753	452 aa		4.93	□□□□□ -1.62
SLX9	YGR081C	HXT13	P39924	564 aa		4.93	□□□□□ -1.62
SLX9	YGR081C	HXT17	P53631	564 aa		4.93	□□□□□ -1.62
SLX9	YGR081C	SIW14	P53965	281 aa		4.93	□□□□□ -1.62
SLX9	YGR081C	HXT15	P54854	567 aa		4.93	□□□□□ -1.62
SLX9	YGR081C	DED1	P06634	604 aa	Known RBP	4.92	□□□□□ -1.62
SLX9	YGR081C	ATG14	P38270	344 aa		4.92	□□□□□ -1.62
SLX9	YGR081C	NMD3	P38861	518 aa	Known RBP	4.92	□□□□□ -1.62
SLX9	YGR081C	ROD1	Q02805	837 aa		4.92	□□□□□ -1.62
SLX9	YGR081C	RMD1	Q03441	430 aa		4.92	□□□□□ -1.62
SLX9	YGR081C	MRL1	Q06815	381 aa		4.92	□□□□□ -1.62
SLX9	YGR081C	HRK1	Q08732	759 aa	Known RBP	4.92	□□□□□ -1.62
SLX9	YGR081C	QNS1	P38795	714 aa	Known RBP	4.91	□□□□□ -1.62
SLX9	YGR081C	PEX7	P39108	375 aa		4.91	□□□□□ -1.62
SLX9	YGR081C	YJL045W	P47052	634 aa		4.91	□□□□□ -1.62
SLX9	YGR081C	ENT3	P47160	408 aa		4.91	□□□□□ -1.62
SLX9	YGR081C	NSI1	Q12457	570 aa		4.91	□□□□□ -1.62
SLX9	YGR081C	GCR1	P07261	785 aa		4.9	□□□□□ -1.63
SLX9	YGR081C	PEP7	P32609	515 aa		4.9	□□□□□ -1.63
SLX9	YGR081C	VPS53	P47061	822 aa		4.9	□□□□□ -1.63
SLX9	YGR081C	RAT1	Q02792	1006 aa	Known RBP	4.9	□□□□□ -1.63
SLX9	YGR081C	TRE1	Q08919	783 aa		4.9	□□□□□ -1.63
SLX9	YGR081C	SAM35	P14693	329 aa		4.89	□□□□□ -1.63
SLX9	YGR081C	MKK2	P32491	506 aa		4.89	□□□□□ -1.63
SLX9	YGR081C	ALG3	P38179	458 aa		4.89	□□□□□ -1.63
SLX9	YGR081C	PRO1	P32264	428 aa		4.88	□□□□□ -1.63
SLX9	YGR081C	DUT1	P33317	147 aa		4.88	□□□□□ -1.63
SLX9	YGR081C	YHL012W	P38709	493 aa		4.88	□□□□□ -1.63
SLX9	YGR081C	SSY1	Q03770	852 aa		4.88	□□□□□ -1.63
SLX9	YGR081C	PTC5	Q12511	572 aa		4.88	□□□□□ -1.63
SLX9	YGR081C	KIP1	P28742	1111 aa		4.87	□□□□□ -1.63
SLX9	YGR081C	LPX1	Q12405	387 aa	Known RBP	4.87	□□□□□ -1.63
SLX9	YGR081C	ADP1	P25371	1049 aa		4.86	□□□□□ -1.63
SLX9	YGR081C	HSP78	P33416	811 aa		4.86	□□□□□ -1.63
SLX9	YGR081C	PET112	P33893	541 aa		4.86	□□□□□ -1.63
SLX9	YGR081C	PTC7	P38797	343 aa		4.86	□□□□□ -1.63
SLX9	YGR081C	GPB2	P39717	880 aa		4.86	□□□□□ -1.63
SLX9	YGR081C	ORC3	P54790	616 aa		4.86	□□□□□ -1.63
SLX9	YGR081C	RTT10	Q08924	1013 aa		4.86	□□□□□ -1.63
SLX9	YGR081C	SYP1	P25623	870 aa	Known RBP	4.85	□□□□□ -1.63
SLX9	YGR081C	YSC84	P32793	468 aa		4.85	□□□□□ -1.63
SLX9	YGR081C	LRG1	P35688	1017 aa		4.85	□□□□□ -1.63
SLX9	YGR081C	POL12	P38121	705 aa	Predicted RBP	4.85	□□□□□ -1.63
SLX9	YGR081C	GTS1	P40956	396 aa		4.85	□□□□□ -1.63
SLX9	YGR081C	CDC34	P14682	295 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	DBP5	P20449	482 aa	Known RBP	4.84	□□□□□ -1.63
SLX9	YGR081C	SRO9	P25567	434 aa	Known RBP	4.84	□□□□□ -1.63
SLX9	YGR081C	MDL2	P33311	773 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	RER2	P35196	286 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	RGD1	P38339	666 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	CNN1	P43618	361 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	RCL1	Q08096	367 aa	Predicted RBP	4.84	□□□□□ -1.63
SLX9	YGR081C	YPL260W	Q08977	551 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	SPO21	Q12411	609 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	DFG16	Q99234	619 aa		4.84	□□□□□ -1.63
SLX9	YGR081C	SNF5	P18480	905 aa		4.83	□□□□□ -1.64
SLX9	YGR081C	MNR2	P35724	969 aa		4.83	□□□□□ -1.64
SLX9	YGR081C	MET10	P39692	1035 aa		4.83	□□□□□ -1.64
SLX9	YGR081C	RPN3	P40016	523 aa	Known RBP	4.83	□□□□□ -1.64
SLX9	YGR081C	EEB1	Q02891	456 aa		4.83	□□□□□ -1.64
SLX9	YGR081C	AOS1	Q06624	347 aa		4.83	□□□□□ -1.64
SLX9	YGR081C	COQ4	O13525	335 aa		4.82	□□□□□ -1.64
SLX9	YGR081C	TRP2	P00899	507 aa	Known RBP	4.82	□□□□□ -1.64
SLX9	YGR081C	ELM1	P32801	640 aa		4.82	□□□□□ -1.64
SLX9	YGR081C	BAP2	P38084	609 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms