RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W TY1A-NL1Q12391 440 aaKnown RBP5.56□□□□□ -1.52
PRP18YGR006W DED1P06634 604 aaKnown RBP5.55□□□□□ -1.52
PRP18YGR006W LYP1P32487 611 aa5.55□□□□□ -1.52
PRP18YGR006W MKK2P32491 506 aa5.55□□□□□ -1.52
PRP18YGR006W PRY1P47032 299 aa5.55□□□□□ -1.52
PRP18YGR006W YJL049WP47048 450 aa5.55□□□□□ -1.52
PRP18YGR006W BUD9P53226 547 aa5.55□□□□□ -1.52
PRP18YGR006W EEB1Q02891 456 aa5.55□□□□□ -1.52
PRP18YGR006W DOT1Q04089 582 aaKnown RBP5.55□□□□□ -1.52
PRP18YGR006W ALG6Q12001 544 aaKnown RBP5.55□□□□□ -1.52
PRP18YGR006W AI3P03877 415 aa5.54□□□□□ -1.52
PRP18YGR006W YCK2P23292 546 aaKnown RBP5.54□□□□□ -1.52
PRP18YGR006W RSC6P25632 483 aa5.54□□□□□ -1.52
PRP18YGR006W RER2P35196 286 aa5.54□□□□□ -1.52
PRP18YGR006W OCA5P38738 679 aa5.54□□□□□ -1.52
PRP18YGR006W SLN1P39928 1220 aaPredicted RBP5.54□□□□□ -1.52
PRP18YGR006W SPO74P45819 413 aa5.54□□□□□ -1.52
PRP18YGR006W YGR045CP53229 120 aa5.54□□□□□ -1.52
PRP18YGR006W NCE103P53615 221 aa5.54□□□□□ -1.52
PRP18YGR006W SPO20Q04359 397 aa5.54□□□□□ -1.52
PRP18YGR006W OPI10Q08202 246 aa5.54□□□□□ -1.52
PRP18YGR006W FAL1Q12099 399 aaKnown RBP5.54□□□□□ -1.52
PRP18YGR006W TRP2P00899 507 aaKnown RBP5.53□□□□□ -1.52
PRP18YGR006W SYP1P25623 870 aaKnown RBP5.53□□□□□ -1.52
PRP18YGR006W LSB3P43603 459 aaKnown RBP5.53□□□□□ -1.52
PRP18YGR006W VPS53P47061 822 aa5.53□□□□□ -1.52
PRP18YGR006W TYW3P53177 273 aa5.53□□□□□ -1.52
PRP18YGR006W YNR063WP53749 607 aa5.53□□□□□ -1.52
PRP18YGR006W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PRP18YGR006W BAS1P22035 811 aa5.52□□□□□ -1.53
PRP18YGR006W SKN7P38889 622 aa5.52□□□□□ -1.53
PRP18YGR006W CNN1P43618 361 aa5.52□□□□□ -1.53
PRP18YGR006W ELA1P53861 379 aaPredicted RBP5.52□□□□□ -1.53
PRP18YGR006W GAS5Q08193 484 aa5.52□□□□□ -1.53
PRP18YGR006W MCA1Q08601 432 aa5.52□□□□□ -1.53
PRP18YGR006W DBP5P20449 482 aaKnown RBP5.51□□□□□ -1.53
PRP18YGR006W NNK1P36003 928 aa5.51□□□□□ -1.53
PRP18YGR006W TAT1P38085 619 aa5.51□□□□□ -1.53
PRP18YGR006W SNF7P39929 240 aaKnown RBP5.51□□□□□ -1.53
PRP18YGR006W ARI1P53111 347 aaKnown RBP5.51□□□□□ -1.53
PRP18YGR006W RAT1Q02792 1006 aaKnown RBP5.51□□□□□ -1.53
PRP18YGR006W TDA5Q06417 326 aaKnown RBP5.51□□□□□ -1.53
PRP18YGR006W YTA7P40340 1379 aa5.51□□□□□ -1.53
PRP18YGR006W PRI2P20457 528 aa5.5□□□□□ -1.53
PRP18YGR006W AGP1P25376 633 aa5.5□□□□□ -1.53
PRP18YGR006W AFG2P32794 780 aa5.5□□□□□ -1.53
PRP18YGR006W SMY2P32909 740 aaKnown RBP5.5□□□□□ -1.53
PRP18YGR006W GPT2P36148 743 aa5.5□□□□□ -1.53
PRP18YGR006W ALG3P38179 458 aa5.5□□□□□ -1.53
PRP18YGR006W RGD1P38339 666 aa5.5□□□□□ -1.53
PRP18YGR006W ORC1P54784 914 aaPredicted RBP5.5□□□□□ -1.53
PRP18YGR006W TIF35Q04067 274 aaKnown RBP5.5□□□□□ -1.53
PRP18YGR006W YOL098CQ12496 1037 aa5.5□□□□□ -1.53
PRP18YGR006W PTC5Q12511 572 aa5.5□□□□□ -1.53
PRP18YGR006W AIM44Q99299 758 aa5.5□□□□□ -1.53
PRP18YGR006W RET1P22276 1149 aaKnown RBP5.49□□□□□ -1.53
PRP18YGR006W QNS1P38795 714 aaKnown RBP5.49□□□□□ -1.53
PRP18YGR006W SPF1P39986 1215 aaKnown RBP5.49□□□□□ -1.53
PRP18YGR006W MSH4P40965 878 aaPredicted RBP5.49□□□□□ -1.53
PRP18YGR006W CCT8P47079 568 aaKnown RBP5.49□□□□□ -1.53
PRP18YGR006W HNT2P49775 206 aa5.49□□□□□ -1.53
PRP18YGR006W RSA3Q05942 220 aaKnown RBP5.49□□□□□ -1.53
PRP18YGR006W RKM4Q12504 494 aa5.49□□□□□ -1.53
PRP18YGR006W GRX1P25373 110 aaKnown RBP5.48□□□□□ -1.53
PRP18YGR006W NFS1P25374 497 aa5.48□□□□□ -1.53
PRP18YGR006W SBA1P28707 216 aaKnown RBP5.48□□□□□ -1.53
PRP18YGR006W MCM7P38132 845 aa5.48□□□□□ -1.53
PRP18YGR006W NAN1Q02931 896 aaKnown RBP5.48□□□□□ -1.53
PRP18YGR006W SHE9Q04172 456 aa5.48□□□□□ -1.53
PRP18YGR006W YLR257WQ06146 321 aaKnown RBP5.48□□□□□ -1.53
PRP18YGR006W GIC2Q06648 383 aa5.48□□□□□ -1.53
PRP18YGR006W HRK1Q08732 759 aaKnown RBP5.48□□□□□ -1.53
PRP18YGR006W YPL260WQ08977 551 aa5.48□□□□□ -1.53
PRP18YGR006W INO1P11986 533 aa5.47□□□□□ -1.53
PRP18YGR006W PIN4P34217 668 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
PRP18YGR006W YKL069WP36088 180 aa5.47□□□□□ -1.53
PRP18YGR006W YLR225CQ05948 407 aaKnown RBP5.47□□□□□ -1.53
PRP18YGR006W YKL107WP34251 309 aa5.46□□□□□ -1.54
PRP18YGR006W MRP8P35719 219 aa5.46□□□□□ -1.54
PRP18YGR006W MPH1P40562 993 aa5.46□□□□□ -1.54
PRP18YGR006W ALT1P52893 592 aa5.46□□□□□ -1.54
PRP18YGR006W FPR4Q06205 392 aaPredicted RBP5.46□□□□□ -1.54
PRP18YGR006W AOS1Q06624 347 aa5.46□□□□□ -1.54
PRP18YGR006W RPS4AP0CX35 261 aaKnown RBP5.45□□□□□ -1.54
PRP18YGR006W RPS4BP0CX36 261 aaKnown RBP5.45□□□□□ -1.54
PRP18YGR006W STI1P15705 589 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
PRP18YGR006W MLS1P30952 554 aa5.45□□□□□ -1.54
PRP18YGR006W SRP40P32583 406 aaPredicted RBP5.45□□□□□ -1.54
PRP18YGR006W ABD1P32783 436 aaPredicted RBP5.45□□□□□ -1.54
PRP18YGR006W MOT2P34909 587 aaKnown RBP5.45□□□□□ -1.54
PRP18YGR006W SEA4P38164 1038 aa5.45□□□□□ -1.54
PRP18YGR006W GNT1Q12096 491 aa5.45□□□□□ -1.54
PRP18YGR006W PUF4P25339 888 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
PRP18YGR006W KIP1P28742 1111 aa5.44□□□□□ -1.54
PRP18YGR006W COQ2P32378 372 aa5.44□□□□□ -1.54
PRP18YGR006W VBA5P36172 582 aa5.44□□□□□ -1.54
PRP18YGR006W TAT2P38967 592 aa5.44□□□□□ -1.54
PRP18YGR006W IRR1P40541 1150 aa5.44□□□□□ -1.54
PRP18YGR006W YGL176CP46945 554 aa5.44□□□□□ -1.54
PRP18YGR006W NSE3Q05541 303 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms