RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	SLS1	P42900	643 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	MTR4	P47047	1073 aa	Known RBP	4.32	□□□□□ -1.72
ECO1	YFR027W	YGL140C	P53120	1219 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	PEX13	P80667	386 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	RMD1	Q03441	430 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	GIC2	Q06648	383 aa		4.32	□□□□□ -1.72
ECO1	YFR027W	NAM7	P30771	971 aa	Known RBP	4.31	□□□□□ -1.72
ECO1	YFR027W	SEC8	P32855	1065 aa		4.31	□□□□□ -1.72
ECO1	YFR027W	GPT2	P36148	743 aa		4.31	□□□□□ -1.72
ECO1	YFR027W	YGR045C	P53229	120 aa		4.31	□□□□□ -1.72
ECO1	YFR027W	UTP5	Q04177	643 aa	Known RBP	4.31	□□□□□ -1.72
ECO1	YFR027W	ALG6	Q12001	544 aa	Known RBP	4.31	□□□□□ -1.72
ECO1	YFR027W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
ECO1	YFR027W	HEM13	P11353	328 aa	Known RBP	4.3	□□□□□ -1.72
ECO1	YFR027W	CHS2	P14180	963 aa		4.3	□□□□□ -1.72
ECO1	YFR027W	MSB1	P21339	1137 aa	Known RBP	4.3	□□□□□ -1.72
ECO1	YFR027W	RKM2	Q03942	479 aa		4.3	□□□□□ -1.72
ECO1	YFR027W	SPR28	Q04921	423 aa		4.3	□□□□□ -1.72
ECO1	YFR027W	ESF1	Q06344	628 aa	Known RBP	4.3	□□□□□ -1.72
ECO1	YFR027W	SMY2	P32909	740 aa	Known RBP	4.29	□□□□□ -1.72
ECO1	YFR027W	MSH4	P40965	878 aa	Predicted RBP	4.29	□□□□□ -1.72
ECO1	YFR027W	XKS1	P42826	600 aa		4.29	□□□□□ -1.72
ECO1	YFR027W	ALT1	P52893	592 aa		4.29	□□□□□ -1.72
ECO1	YFR027W	OYE2	Q03558	400 aa	Known RBP	4.29	□□□□□ -1.72
ECO1	YFR027W	AVO1	Q08236	1176 aa		4.29	□□□□□ -1.72
ECO1	YFR027W	CHD1	P32657	1468 aa		4.29	□□□□□ -1.72
ECO1	YFR027W	NNK1	P36003	928 aa		4.28	□□□□□ -1.72
ECO1	YFR027W	SEA4	P38164	1038 aa		4.28	□□□□□ -1.72
ECO1	YFR027W	YAR028W	P39548	234 aa		4.28	□□□□□ -1.72
ECO1	YFR027W	SPO74	P45819	413 aa		4.28	□□□□□ -1.72
ECO1	YFR027W	ENT3	P47160	408 aa		4.28	□□□□□ -1.72
ECO1	YFR027W	ELA1	P53861	379 aa	Predicted RBP	4.28	□□□□□ -1.72
ECO1	YFR027W	STH1	P32597	1359 aa		4.27	□□□□□ -1.73
ECO1	YFR027W	CYC7	P00045	113 aa		4.27	□□□□□ -1.73
ECO1	YFR027W	RNQ1	P25367	405 aa		4.27	□□□□□ -1.73
ECO1	YFR027W	ADD66	P36040	267 aa		4.27	□□□□□ -1.73
ECO1	YFR027W	MMM1	P41800	426 aa		4.27	□□□□□ -1.73
ECO1	YFR027W	CIT3	P43635	486 aa		4.27	□□□□□ -1.73
ECO1	YFR027W	GNP1	P48813	663 aa		4.27	□□□□□ -1.73
ECO1	YFR027W	YOR059C	Q08448	450 aa	Known RBP	4.27	□□□□□ -1.73
ECO1	YFR027W	RPS4A	P0CX35	261 aa	Known RBP	4.26	□□□□□ -1.73
ECO1	YFR027W	RPS4B	P0CX36	261 aa	Known RBP	4.26	□□□□□ -1.73
ECO1	YFR027W	NFS1	P25374	497 aa		4.26	□□□□□ -1.73
ECO1	YFR027W	HSE1	P38753	452 aa		4.26	□□□□□ -1.73
ECO1	YFR027W	UBP5	P39944	805 aa		4.26	□□□□□ -1.73
ECO1	YFR027W	SIW14	P53965	281 aa		4.26	□□□□□ -1.73
ECO1	YFR027W	EST2	Q06163	884 aa		4.26	□□□□□ -1.73
ECO1	YFR027W	HDA2	Q06629	674 aa		4.26	□□□□□ -1.73
ECO1	YFR027W	CLC1	P17891	233 aa		4.25	□□□□□ -1.73
ECO1	YFR027W	WHI3	P34761	661 aa	Known RBP	4.25	□□□□□ -1.73
ECO1	YFR027W	RIX1	P38883	763 aa	Predicted RBP	4.25	□□□□□ -1.73
ECO1	YFR027W	HXT13	P39924	564 aa		4.25	□□□□□ -1.73
ECO1	YFR027W	HXT17	P53631	564 aa		4.25	□□□□□ -1.73
ECO1	YFR027W	HXT15	P54854	567 aa		4.25	□□□□□ -1.73
ECO1	YFR027W	RSA3	Q05942	220 aa	Known RBP	4.25	□□□□□ -1.73
ECO1	YFR027W	LAP2	Q10740	671 aa		4.25	□□□□□ -1.73
ECO1	YFR027W	SEC3	P33332	1336 aa	Known RBP	4.24	□□□□□ -1.73
ECO1	YFR027W	GCR1	P07261	785 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	RET1	P22276	1149 aa	Known RBP	4.24	□□□□□ -1.73
ECO1	YFR027W	PEP7	P32609	515 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	AFG2	P32794	780 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	ATG14	P38270	344 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	VPS53	P47061	822 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	EAR1	Q03212	550 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	SVF1	Q05515	481 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	YLR257W	Q06146	321 aa	Known RBP	4.24	□□□□□ -1.73
ECO1	YFR027W	YVC1	Q12324	675 aa		4.24	□□□□□ -1.73
ECO1	YFR027W	MNR2	P35724	969 aa		4.23	□□□□□ -1.73
ECO1	YFR027W	QNS1	P38795	714 aa	Known RBP	4.23	□□□□□ -1.73
ECO1	YFR027W	OYE3	P41816	400 aa	Predicted RBP	4.23	□□□□□ -1.73
ECO1	YFR027W	SNU71	P53207	620 aa	Known RBP	4.23	□□□□□ -1.73
ECO1	YFR027W	RCM1	P53972	490 aa		4.23	□□□□□ -1.73
ECO1	YFR027W	MRL1	Q06815	381 aa		4.23	□□□□□ -1.73
ECO1	YFR027W	PUS7	Q08647	676 aa	Known RBP	4.23	□□□□□ -1.73
ECO1	YFR027W	HRK1	Q08732	759 aa	Known RBP	4.23	□□□□□ -1.73
ECO1	YFR027W	RTT10	Q08924	1013 aa		4.23	□□□□□ -1.73
ECO1	YFR027W	SPP41	P38904	1435 aa		4.22	□□□□□ -1.73
ECO1	YFR027W	MKK2	P32491	506 aa		4.22	□□□□□ -1.73
ECO1	YFR027W	SEG2	P34250	1132 aa		4.22	□□□□□ -1.73
ECO1	YFR027W	DEF1	P35732	738 aa	Known RBP	4.22	□□□□□ -1.73
ECO1	YFR027W	KRI1	P42846	591 aa	Known RBP	4.22	□□□□□ -1.73
ECO1	YFR027W	ROD1	Q02805	837 aa		4.22	□□□□□ -1.73
ECO1	YFR027W	TPP1	Q03796	238 aa		4.22	□□□□□ -1.73
ECO1	YFR027W	NSI1	Q12457	570 aa		4.22	□□□□□ -1.73
ECO1	YFR027W	MMS22	Q06164	1454 aa		4.22	□□□□□ -1.73
ECO1	YFR027W	GCD1	P09032	578 aa	Predicted RBP	4.21	□□□□□ -1.74
ECO1	YFR027W	NAP1	P25293	417 aa	Known RBP	4.21	□□□□□ -1.74
ECO1	YFR027W	DUT1	P33317	147 aa		4.21	□□□□□ -1.74
ECO1	YFR027W	PET112	P33893	541 aa		4.21	□□□□□ -1.74
ECO1	YFR027W	LRG1	P35688	1017 aa		4.21	□□□□□ -1.74
ECO1	YFR027W	MET10	P39692	1035 aa		4.21	□□□□□ -1.74
ECO1	YFR027W	NUG1	P40010	520 aa	Known RBP	4.21	□□□□□ -1.74
ECO1	YFR027W	YNR063W	P53749	607 aa		4.21	□□□□□ -1.74
ECO1	YFR027W	AIM44	Q99299	758 aa		4.21	□□□□□ -1.74
ECO1	YFR027W	UFD4	P33202	1483 aa		4.21	□□□□□ -1.74
ECO1	YFR027W	DED1	P06634	604 aa	Known RBP	4.2	□□□□□ -1.74
ECO1	YFR027W	CDC34	P14682	295 aa		4.2	□□□□□ -1.74
ECO1	YFR027W	IME2	P32581	645 aa		4.2	□□□□□ -1.74
ECO1	YFR027W	ALG3	P38179	458 aa		4.2	□□□□□ -1.74
ECO1	YFR027W	FPR3	P38911	411 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms