RNA–Protein interactions for RNA: YFR023W

PES4, Transcript of Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, yeast

Gene PES4, Length 1,836 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PES4	YFR023W	GRS1	P38088	690 aa	Known RBP	4.73	□□□□□ -1.65
PES4	YFR023W	UTP5	Q04177	643 aa	Known RBP	4.72	□□□□□ -1.65
PES4	YFR023W	RSA3	Q05942	220 aa	Known RBP	4.72	□□□□□ -1.65
PES4	YFR023W	KAR2	P16474	682 aa	Known RBP	4.72	□□□□□ -1.65
PES4	YFR023W	ETP1	P38748	585 aa	Known RBP	4.72	□□□□□ -1.65
PES4	YFR023W	MDJ2	P42834	146 aa		4.72	□□□□□ -1.65
PES4	YFR023W	RKM2	Q03942	479 aa		4.72	□□□□□ -1.65
PES4	YFR023W	NBA1	Q08229	501 aa	Known RBP	4.72	□□□□□ -1.65
PES4	YFR023W	ERP5	P38819	212 aa		4.71	□□□□□ -1.66
PES4	YFR023W	NUT2	Q06213	157 aa		4.71	□□□□□ -1.66
PES4	YFR023W	RPS13	P05756	151 aa	Known RBP	4.7	□□□□□ -1.66
PES4	YFR023W	MSH3	P25336	1018 aa		4.7	□□□□□ -1.66
PES4	YFR023W	GCD6	P32501	712 aa	Known RBP	4.7	□□□□□ -1.66
PES4	YFR023W	VPS53	P47061	822 aa		4.7	□□□□□ -1.66
PES4	YFR023W	GPI13	Q07830	1017 aa		4.7	□□□□□ -1.66
PES4	YFR023W	YBL113C	Q7M4S9	792 aa		4.7	□□□□□ -1.66
PES4	YFR023W	FRT1	Q99332	602 aa		4.7	□□□□□ -1.66
PES4	YFR023W	YLR358C	O13565	187 aa		4.69	□□□□□ -1.66
PES4	YFR023W	XKS1	P42826	600 aa		4.69	□□□□□ -1.66
PES4	YFR023W	YPL277C	Q08989	487 aa		4.69	□□□□□ -1.66
PES4	YFR023W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
PES4	YFR023W	TOD6	P34219	525 aa		4.69	□□□□□ -1.66
PES4	YFR023W	VPS35	P34110	944 aa		4.68	□□□□□ -1.66
PES4	YFR023W	RSM26	P47141	266 aa		4.68	□□□□□ -1.66
PES4	YFR023W	AIM26	P32858	118 aa		4.67	□□□□□ -1.66
PES4	YFR023W	SQT1	P35184	431 aa		4.67	□□□□□ -1.66
PES4	YFR023W	QNS1	P38795	714 aa	Known RBP	4.67	□□□□□ -1.66
PES4	YFR023W	PRP40	P33203	583 aa	Known RBP	4.67	□□□□□ -1.66
PES4	YFR023W	PEX13	P80667	386 aa		4.67	□□□□□ -1.66
PES4	YFR023W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
PES4	YFR023W	CLU1	Q03690	1277 aa	Known RBP	4.67	□□□□□ -1.66
PES4	YFR023W	RSC58	Q07979	502 aa		4.67	□□□□□ -1.66
PES4	YFR023W	YOR352W	Q08816	343 aa		4.67	□□□□□ -1.66
PES4	YFR023W	SPS1	P08458	490 aa		4.66	□□□□□ -1.66
PES4	YFR023W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
PES4	YFR023W	YSC84	P32793	468 aa		4.66	□□□□□ -1.66
PES4	YFR023W	YJL045W	P47052	634 aa		4.66	□□□□□ -1.66
PES4	YFR023W	HNT2	P49775	206 aa		4.66	□□□□□ -1.66
PES4	YFR023W	GIS1	Q03833	894 aa		4.66	□□□□□ -1.66
PES4	YFR023W	COQ4	O13525	335 aa		4.65	□□□□□ -1.66
PES4	YFR023W	ADD66	P36040	267 aa		4.65	□□□□□ -1.66
PES4	YFR023W	CCZ1	P38273	704 aa		4.65	□□□□□ -1.66
PES4	YFR023W	GEF1	P37020	779 aa		4.65	□□□□□ -1.67
PES4	YFR023W	NMD3	P38861	518 aa	Known RBP	4.65	□□□□□ -1.67
PES4	YFR023W	ULP1	Q02724	621 aa		4.65	□□□□□ -1.67
PES4	YFR023W	HAT1	Q12341	374 aa		4.65	□□□□□ -1.67
PES4	YFR023W	ABZ1	P37254	787 aa	Predicted RBP	4.64	□□□□□ -1.67
PES4	YFR023W	RDH54	P38086	958 aa		4.64	□□□□□ -1.67
PES4	YFR023W	PEX28	P38848	579 aa		4.63	□□□□□ -1.67
PES4	YFR023W	YNR063W	P53749	607 aa		4.63	□□□□□ -1.67
PES4	YFR023W	OXR1	Q08952	273 aa		4.63	□□□□□ -1.67
PES4	YFR023W	YDR132C	Q03900	495 aa		4.62	□□□□□ -1.67
PES4	YFR023W	SGD1	Q06132	899 aa		4.62	□□□□□ -1.67
PES4	YFR023W	PHO4	P07270	312 aa	Known RBP	4.62	□□□□□ -1.67
PES4	YFR023W	TAF13	P11747	167 aa		4.62	□□□□□ -1.67
PES4	YFR023W	BAP2	P38084	609 aa		4.62	□□□□□ -1.67
PES4	YFR023W	DAL4	Q04895	635 aa		4.62	□□□□□ -1.67
PES4	YFR023W	TUB2	P02557	457 aa	Known RBP	4.61	□□□□□ -1.67
PES4	YFR023W	CTS1	P29029	562 aa		4.61	□□□□□ -1.67
PES4	YFR023W	SEC26	P41810	973 aa	Known RBP	4.61	□□□□□ -1.67
PES4	YFR023W	TNA1	P53322	534 aa		4.61	□□□□□ -1.67
PES4	YFR023W	URN1	Q06525	465 aa	Known RBP	4.61	□□□□□ -1.67
PES4	YFR023W	SHM2	P37291	469 aa	Known RBP	4.6	□□□□□ -1.67
PES4	YFR023W	LAM1	P38851	1228 aa		4.6	□□□□□ -1.67
PES4	YFR023W	TAT2	P38967	592 aa		4.6	□□□□□ -1.67
PES4	YFR023W	YGL140C	P53120	1219 aa		4.6	□□□□□ -1.67
PES4	YFR023W	GCN5	Q03330	439 aa		4.6	□□□□□ -1.67
PES4	YFR023W	ADI1	Q03677	179 aa		4.6	□□□□□ -1.67
PES4	YFR023W	SEC23	P15303	768 aa	Known RBP	4.6	□□□□□ -1.67
PES4	YFR023W	DOM34	P33309	386 aa		4.6	□□□□□ -1.67
PES4	YFR023W	YHL050C	P38721	697 aa		4.6	□□□□□ -1.67
PES4	YFR023W	YHR219W	P38900	624 aa		4.6	□□□□□ -1.67
PES4	YFR023W	RPN3	P40016	523 aa	Known RBP	4.6	□□□□□ -1.67
PES4	YFR023W	HOS3	Q02959	697 aa	Known RBP	4.6	□□□□□ -1.67
PES4	YFR023W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
PES4	YFR023W	PPX1	P38698	397 aa		4.59	□□□□□ -1.67
PES4	YFR023W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
PES4	YFR023W	PIK1	P39104	1066 aa		4.59	□□□□□ -1.67
PES4	YFR023W	YPL109C	Q02981	657 aa		4.59	□□□□□ -1.67
PES4	YFR023W	EST2	Q06163	884 aa		4.59	□□□□□ -1.67
PES4	YFR023W	KIP1	P28742	1111 aa		4.58	□□□□□ -1.68
PES4	YFR023W	UGA4	P32837	571 aa		4.58	□□□□□ -1.68
PES4	YFR023W	MEF2	P39677	819 aa		4.58	□□□□□ -1.68
PES4	YFR023W	SPT20	P50875	604 aa		4.58	□□□□□ -1.68
PES4	YFR023W	RSB1	Q08417	382 aa		4.58	□□□□□ -1.68
PES4	YFR023W	YPL260W	Q08977	551 aa		4.58	□□□□□ -1.68
PES4	YFR023W	PNS1	Q12412	539 aa		4.58	□□□□□ -1.68
PES4	YFR023W	STM1	P39015	273 aa	Known RBP	4.57	□□□□□ -1.68
PES4	YFR023W	ENT3	P47160	408 aa		4.57	□□□□□ -1.68
PES4	YFR023W	PTC5	Q12511	572 aa		4.57	□□□□□ -1.68
PES4	YFR023W	CYC1	P00044	109 aa	Predicted RBP	4.56	□□□□□ -1.68
PES4	YFR023W	DAK2	P43550	591 aa		4.56	□□□□□ -1.68
PES4	YFR023W	TAF7	Q05021	590 aa		4.56	□□□□□ -1.68
PES4	YFR023W	AFG2	P32794	780 aa		4.56	□□□□□ -1.68
PES4	YFR023W	RSM24	Q03976	319 aa		4.56	□□□□□ -1.68
PES4	YFR023W	RCL1	Q08096	367 aa	Predicted RBP	4.55	□□□□□ -1.68
PES4	YFR023W	SNF5	P18480	905 aa		4.54	□□□□□ -1.68
PES4	YFR023W	STE11	P23561	717 aa		4.54	□□□□□ -1.68
PES4	YFR023W	MET4	P32389	672 aa		4.54	□□□□□ -1.68
PES4	YFR023W	TRM2	P33753	639 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms