RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	YGL015C	P33199	130 aa		5.95	□□□□□ -1.46
VTC2	YFL004W	MCX1	P38323	520 aa	Predicted RBP	5.95	□□□□□ -1.46
VTC2	YFL004W	MRPS35	P53292	345 aa		5.95	□□□□□ -1.46
VTC2	YFL004W	TSR1	Q07381	788 aa	Known RBP	5.95	□□□□□ -1.46
VTC2	YFL004W	BRE1	Q07457	700 aa	Known RBP	5.95	□□□□□ -1.46
VTC2	YFL004W	BOI2	P39969	1040 aa		5.94	□□□□□ -1.46
VTC2	YFL004W	GGA1	Q06336	557 aa		5.94	□□□□□ -1.46
VTC2	YFL004W	COQ4	O13525	335 aa		5.94	□□□□□ -1.46
VTC2	YFL004W	CDC8	P00572	216 aa		5.94	□□□□□ -1.46
VTC2	YFL004W	TAL1	P15019	335 aa	Known RBP	5.94	□□□□□ -1.46
VTC2	YFL004W	MCM4	P30665	933 aa	Known RBP	5.94	□□□□□ -1.46
VTC2	YFL004W	GCN20	P43535	752 aa	Known RBP	5.94	□□□□□ -1.46
VTC2	YFL004W	YPL109C	Q02981	657 aa		5.94	□□□□□ -1.46
VTC2	YFL004W	YMR085W	P0CF18	432 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	PDR1	P12383	1068 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	NAT1	P12945	854 aa	Known RBP	5.93	□□□□□ -1.46
VTC2	YFL004W	NTH2	P35172	780 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	ARI1	P53111	347 aa	Known RBP	5.93	□□□□□ -1.46
VTC2	YFL004W	MMR1	Q06324	491 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	MET7	Q08645	548 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	CHS5	Q12114	671 aa	Known RBP	5.93	□□□□□ -1.46
VTC2	YFL004W	MCM1	P11746	286 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	TYR1	P20049	452 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	CLN1	P20437	546 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	UBP1	P25037	809 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	BRF1	P29056	596 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	NUP60	P39705	539 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	EFM4	P40516	257 aa		5.93	□□□□□ -1.46
VTC2	YFL004W	GVP36	P40531	326 aa	Known RBP	5.93	□□□□□ -1.46
VTC2	YFL004W	MAG2	Q06436	670 aa	Known RBP	5.93	□□□□□ -1.46
VTC2	YFL004W	PRT1	P06103	763 aa	Known RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	VAN1	P23642	535 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	SEC8	P32855	1065 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	SRL3	P36167	246 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	REV7	P38927	245 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	VID27	P40157	782 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	MDJ2	P42834	146 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	PCL10	P53124	433 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	ZPR1	P53303	486 aa	Known RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	TIM11	P81449	96 aa	Predicted RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	GTR1	Q00582	310 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	SLK19	Q08581	821 aa	Known RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	MATALPHA2	P0CY08	210 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	HMLALPHA2	P0CY09	210 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	CDC48	P25694	835 aa	Known RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	PAP1	P29468	568 aa	Known RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	INA22	P40576	216 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	BUD6	P41697	788 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	TMA22	P47089	198 aa	Predicted RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	SHE4	P51534	789 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	SHE10	P53075	577 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	ORM1	P53224	222 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	ERG5	P54781	538 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	SPC24	Q04477	213 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	HCR1	Q05775	265 aa	Known RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	NOC3	Q07896	663 aa	Predicted RBP	5.92	□□□□□ -1.46
VTC2	YFL004W	GAS4	Q08271	471 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	GLE1	Q12315	538 aa		5.92	□□□□□ -1.46
VTC2	YFL004W	SEC65	P29478	273 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	ADE17	P38009	592 aa	Known RBP	5.91	□□□□□ -1.46
VTC2	YFL004W	BRL1	P38770	471 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	TDA11	P38854	504 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	ATG3	P40344	310 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	DAS1	P47005	663 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	MTR4	P47047	1073 aa	Known RBP	5.91	□□□□□ -1.46
VTC2	YFL004W	ENP2	P48234	707 aa	Known RBP	5.91	□□□□□ -1.46
VTC2	YFL004W	YKE2	P52553	114 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	ERP6	P53198	216 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	TRS120	Q04183	1289 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	GFD1	Q04839	188 aa	Known RBP	5.91	□□□□□ -1.46
VTC2	YFL004W	DCS2	Q12123	353 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	OCA6	Q12454	224 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	PGI1	P12709	554 aa	Known RBP	5.91	□□□□□ -1.46
VTC2	YFL004W	SEG2	P34250	1132 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	EFM2	P38347	419 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	PPX1	P38698	397 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	KAP123	P40069	1113 aa	Known RBP	5.91	□□□□□ -1.46
VTC2	YFL004W	ADE12	P80210	433 aa	Known RBP	5.91	□□□□□ -1.46
VTC2	YFL004W	YLR407W	Q06070	228 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	MPC54	Q08550	464 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	HMI1	Q12039	706 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	GNT1	Q12096	491 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	NCB2	Q92317	146 aa		5.91	□□□□□ -1.46
VTC2	YFL004W	SCJ1	P25303	377 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	MET4	P32389	672 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	TOA1	P32773	286 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	RPC37	P36121	282 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	VHR2	P40041	505 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	AXL1	P40851	1208 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	YNL247W	P53852	767 aa	Known RBP	5.9	□□□□□ -1.46
VTC2	YFL004W	YNL144C	P53907	740 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	NGL3	Q03210	505 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	PGA3	Q12746	312 aa	Known RBP	5.9	□□□□□ -1.46
VTC2	YFL004W	NHA1	Q99271	985 aa		5.9	□□□□□ -1.46
VTC2	YFL004W	UTP10	P42945	1769 aa	Known RBP	5.9	□□□□□ -1.46
VTC2	YFL004W	PIF1	P07271	859 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	SUI3	P09064	285 aa	Known RBP	5.9	□□□□□ -1.47
VTC2	YFL004W	LPD1	P09624	499 aa	Known RBP	5.9	□□□□□ -1.47
VTC2	YFL004W	MTF2	P10849	440 aa		5.9	□□□□□ -1.47
VTC2	YFL004W	PRP4	P20053	465 aa	Known RBP	5.9	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 167.7 ms