RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W VIK1Q12045 647 aa2.61□□□□□ -1.99
SPF1YEL031W YOL098CQ12496 1037 aa2.61□□□□□ -1.99
SPF1YEL031W RSF2P46974 1380 aa2.61□□□□□ -1.99
SPF1YEL031W HXK1P04806 485 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W VPH2P32341 215 aa2.6□□□□□ -1.99
SPF1YEL031W RPN2P32565 945 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W YKL091CP33324 310 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W STO1P34160 861 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W SPP381P38282 291 aaPredicted RBP2.6□□□□□ -1.99
SPF1YEL031W FZO1P38297 855 aa2.6□□□□□ -1.99
SPF1YEL031W SIP5P40210 489 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W YJR039WP47107 1121 aa2.6□□□□□ -1.99
SPF1YEL031W YNL144CP53907 740 aa2.6□□□□□ -1.99
SPF1YEL031W VMS1Q04311 632 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W ORM2Q06144 216 aa2.6□□□□□ -1.99
SPF1YEL031W HMI1Q12039 706 aa2.6□□□□□ -1.99
SPF1YEL031W NKP1Q12493 238 aa2.6□□□□□ -1.99
SPF1YEL031W DIT2P21595 489 aa2.6□□□□□ -1.99
SPF1YEL031W KTR1P27810 393 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W PDB1P32473 366 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W NIP1P32497 812 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W SEC8P32855 1065 aa2.6□□□□□ -1.99
SPF1YEL031W TIF3P34167 436 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W TPS3P38426 1054 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W BEM4P39011 633 aa2.6□□□□□ -1.99
SPF1YEL031W ILV3P39522 585 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W MRX1P40050 688 aa2.6□□□□□ -1.99
SPF1YEL031W MIC19P43594 170 aa2.6□□□□□ -1.99
SPF1YEL031W MDR1P53258 950 aa2.6□□□□□ -1.99
SPF1YEL031W SUB1P54000 292 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W YML020WQ03722 664 aa2.6□□□□□ -1.99
SPF1YEL031W GRX3Q03835 250 aa2.6□□□□□ -1.99
SPF1YEL031W HFD1Q04458 532 aa2.6□□□□□ -1.99
SPF1YEL031W SSF2Q12153 453 aaPredicted RBP2.6□□□□□ -1.99
SPF1YEL031W PDR1P12383 1068 aa2.6□□□□□ -1.99
SPF1YEL031W TUP1P16649 713 aa2.6□□□□□ -1.99
SPF1YEL031W CBP3P21560 335 aa2.6□□□□□ -1.99
SPF1YEL031W OPI1P21957 404 aa2.6□□□□□ -1.99
SPF1YEL031W FES1P38260 290 aa2.6□□□□□ -1.99
SPF1YEL031W VID27P40157 782 aa2.6□□□□□ -1.99
SPF1YEL031W SEC27P41811 889 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W MDJ2P42834 146 aa2.6□□□□□ -1.99
SPF1YEL031W YNL035CP53962 389 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W CUS1Q02554 436 aaPredicted RBP2.6□□□□□ -1.99
SPF1YEL031W SRL4Q03085 281 aa2.6□□□□□ -1.99
SPF1YEL031W ARO80Q04052 950 aa2.6□□□□□ -1.99
SPF1YEL031W GTB1Q04924 702 aa2.6□□□□□ -1.99
SPF1YEL031W DPL1Q05567 589 aa2.6□□□□□ -1.99
SPF1YEL031W RIX7Q07844 837 aaKnown RBP2.6□□□□□ -1.99
SPF1YEL031W DPS1P04802 557 aaKnown RBP2.59□□□□□ -1.99
SPF1YEL031W PDC1P06169 563 aaKnown RBP2.59□□□□□ -1.99
SPF1YEL031W MTF2P10849 440 aa2.59□□□□□ -1.99
SPF1YEL031W VMA4P22203 233 aaKnown RBP2.59□□□□□ -1.99
SPF1YEL031W BMH1P29311 267 aaKnown RBP2.59□□□□□ -1.99
SPF1YEL031W MRE11P32829 692 aa2.59□□□□□ -1.99
SPF1YEL031W NUF2P33895 451 aa2.59□□□□□ -1.99
SPF1YEL031W BDF1P35817 686 aa2.59□□□□□ -1.99
SPF1YEL031W HEK2P38199 381 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99 RIP-Chip
SPF1YEL031W ETP1P38748 585 aaKnown RBP2.59□□□□□ -1.99
SPF1YEL031W CST6P40535 587 aa2.59□□□□□ -1.99
SPF1YEL031W NOP15P53927 220 aaPredicted RBP2.59□□□□□ -1.99
SPF1YEL031W EEB1Q02891 456 aa2.59□□□□□ -1.99
SPF1YEL031W APL4Q12028 832 aa2.59□□□□□ -1.99
SPF1YEL031W HIF1Q12373 385 aa2.59□□□□□ -1.99
SPF1YEL031W SIN4P32259 974 aa2.59□□□□□ -2
SPF1YEL031W FBP26P32604 452 aa2.59□□□□□ -2
SPF1YEL031W RAD24P32641 659 aa2.59□□□□□ -2
SPF1YEL031W IES2P40154 320 aa2.59□□□□□ -2
SPF1YEL031W YGR237CP50089 785 aa2.59□□□□□ -2
SPF1YEL031W RTC4P53850 401 aa2.59□□□□□ -2
SPF1YEL031W RCM1P53972 490 aa2.59□□□□□ -2
SPF1YEL031W ERG5P54781 538 aa2.59□□□□□ -2
SPF1YEL031W VPS16Q03308 798 aa2.59□□□□□ -2
SPF1YEL031W VTI1Q04338 217 aa2.59□□□□□ -2
SPF1YEL031W YLR287CQ05881 355 aa2.59□□□□□ -2
SPF1YEL031W YOR223WQ12015 292 aa2.59□□□□□ -2
SPF1YEL031W SGT2Q12118 346 aaKnown RBP2.59□□□□□ -2
SPF1YEL031W KCC4P25389 1037 aa2.59□□□□□ -2
SPF1YEL031W PEP3P27801 918 aa2.59□□□□□ -2
SPF1YEL031W BRF1P29056 596 aa2.59□□□□□ -2
SPF1YEL031W EFT1P32324 842 aaKnown RBP2.59□□□□□ -2
SPF1YEL031W CBF2P32504 956 aa2.59□□□□□ -2
SPF1YEL031W SRP40P32583 406 aaPredicted RBP2.59□□□□□ -2
SPF1YEL031W ECM32P32644 1121 aaKnown RBP2.59□□□□□ -2
SPF1YEL031W PCH2P38126 564 aa2.59□□□□□ -2
SPF1YEL031W CTM1P38818 585 aa2.59□□□□□ -2
SPF1YEL031W IES5P40060 125 aa2.59□□□□□ -2
SPF1YEL031W INA22P40576 216 aa2.59□□□□□ -2
SPF1YEL031W YRB1P41920 201 aaKnown RBP2.59□□□□□ -2
SPF1YEL031W ALD2P47771 506 aa2.59□□□□□ -2
SPF1YEL031W VMA10P48836 114 aaKnown RBP2.59□□□□□ -2
SPF1YEL031W SHE10P53075 577 aa2.59□□□□□ -2
SPF1YEL031W YKU80Q04437 629 aa2.59□□□□□ -2
SPF1YEL031W NOB1Q08444 459 aaKnown RBP2.59□□□□□ -2
SPF1YEL031W BUG1Q12191 341 aa2.59□□□□□ -2
SPF1YEL031W NBL1Q3E7Y6 73 aa2.59□□□□□ -2
SPF1YEL031W FKS3Q04952 1785 aa2.58□□□□□ -2
SPF1YEL031W COQ4O13525 335 aa2.58□□□□□ -2
SPF1YEL031W MSB1P21339 1137 aaKnown RBP2.58□□□□□ -2
SPF1YEL031W KAR9P32526 644 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms