RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W STM1P39015 273 aaKnown RBP5.59□□□□□ -1.51
RSM28YDR494W XKS1P42826 600 aa5.59□□□□□ -1.51
RSM28YDR494W DAK2P43550 591 aa5.59□□□□□ -1.51
RSM28YDR494W RSM26P47141 266 aa5.59□□□□□ -1.51
RSM28YDR494W TOS4Q06266 489 aa5.59□□□□□ -1.51
RSM28YDR494W PEX28P38848 579 aa5.58□□□□□ -1.52
RSM28YDR494W NMD3P38861 518 aaKnown RBP5.58□□□□□ -1.52
RSM28YDR494W GTS1P40956 396 aa5.58□□□□□ -1.52
RSM28YDR494W RSA3Q05942 220 aaKnown RBP5.58□□□□□ -1.52
RSM28YDR494W LAP2Q10740 671 aa5.58□□□□□ -1.52
RSM28YDR494W SAM35P14693 329 aa5.57□□□□□ -1.52
RSM28YDR494W SQT1P35184 431 aa5.57□□□□□ -1.52
RSM28YDR494W HSE1P38753 452 aa5.57□□□□□ -1.52
RSM28YDR494W WHI5Q12416 295 aa5.57□□□□□ -1.52
RSM28YDR494W RDH54P38086 958 aa5.56□□□□□ -1.52
RSM28YDR494W OXR1Q08952 273 aa5.56□□□□□ -1.52
RSM28YDR494W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
RSM28YDR494W ATG14P38270 344 aa5.55□□□□□ -1.52
RSM28YDR494W YHL012WP38709 493 aa5.55□□□□□ -1.52
RSM28YDR494W YNR063WP53749 607 aa5.55□□□□□ -1.52
RSM28YDR494W YPL109CQ02981 657 aa5.55□□□□□ -1.52
RSM28YDR494W ADI1Q03677 179 aa5.55□□□□□ -1.52
RSM28YDR494W HRK1Q08732 759 aaKnown RBP5.55□□□□□ -1.52
RSM28YDR494W HEM13P11353 328 aaKnown RBP5.54□□□□□ -1.52
RSM28YDR494W ADD66P36040 267 aa5.54□□□□□ -1.52
RSM28YDR494W THI12P42883 340 aa5.54□□□□□ -1.52
RSM28YDR494W THI5P43534 340 aa5.54□□□□□ -1.52
RSM28YDR494W THI11P47183 340 aa5.54□□□□□ -1.52
RSM28YDR494W YGL140CP53120 1219 aa5.54□□□□□ -1.52
RSM28YDR494W RKM2Q03942 479 aa5.54□□□□□ -1.52
RSM28YDR494W THI13Q07748 340 aa5.54□□□□□ -1.52
RSM28YDR494W YDL177CQ12257 170 aa5.54□□□□□ -1.52
RSM28YDR494W MDL2P33311 773 aa5.53□□□□□ -1.52
RSM28YDR494W THI80P35202 319 aa5.53□□□□□ -1.52
RSM28YDR494W QNS1P38795 714 aaKnown RBP5.53□□□□□ -1.52
RSM28YDR494W FAA3P39002 694 aa5.53□□□□□ -1.52
RSM28YDR494W YJL045WP47052 634 aa5.53□□□□□ -1.52
RSM28YDR494W HXK1P04806 485 aaKnown RBP5.52□□□□□ -1.53
RSM28YDR494W ESC8Q08119 714 aa5.52□□□□□ -1.53
RSM28YDR494W SEC23P15303 768 aaKnown RBP5.51□□□□□ -1.53
RSM28YDR494W PRP6P19735 899 aaPredicted RBP5.51□□□□□ -1.53
RSM28YDR494W SRO9P25567 434 aaKnown RBP5.51□□□□□ -1.53
RSM28YDR494W YCR015CP25616 317 aa5.51□□□□□ -1.53
RSM28YDR494W SEC20P28791 383 aa5.51□□□□□ -1.53
RSM28YDR494W RPT1P33299 467 aaKnown RBP5.51□□□□□ -1.53
RSM28YDR494W ETP1P38748 585 aaKnown RBP5.51□□□□□ -1.53
RSM28YDR494W VPS53P47061 822 aa5.51□□□□□ -1.53
RSM28YDR494W MRPL22P53881 309 aa5.51□□□□□ -1.53
RSM28YDR494W PIC2P40035 300 aa5.5□□□□□ -1.53
RSM28YDR494W YSC84P32793 468 aa5.49□□□□□ -1.53
RSM28YDR494W AFG2P32794 780 aa5.49□□□□□ -1.53
RSM28YDR494W AIM3P38266 947 aaKnown RBP5.49□□□□□ -1.53
RSM28YDR494W IPL1P38991 367 aa5.49□□□□□ -1.53
RSM28YDR494W FOL2P51601 243 aaKnown RBP5.49□□□□□ -1.53
RSM28YDR494W EST2Q06163 884 aa5.49□□□□□ -1.53
RSM28YDR494W AIM26P32858 118 aa5.48□□□□□ -1.53
RSM28YDR494W YKL222CP35995 705 aa5.48□□□□□ -1.53
RSM28YDR494W TAF1P46677 1066 aa5.48□□□□□ -1.53
RSM28YDR494W RSC58Q07979 502 aa5.48□□□□□ -1.53
RSM28YDR494W KIP1P28742 1111 aa5.46□□□□□ -1.54
RSM28YDR494W RIM8P53179 542 aa5.46□□□□□ -1.54
RSM28YDR494W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
RSM28YDR494W GIP4P39732 760 aa5.45□□□□□ -1.54
RSM28YDR494W SNO2P53823 222 aa5.45□□□□□ -1.54
RSM28YDR494W SEN54Q02825 467 aaPredicted RBP5.45□□□□□ -1.54
RSM28YDR494W RCL1Q08096 367 aaPredicted RBP5.45□□□□□ -1.54
RSM28YDR494W NBA1Q08229 501 aaKnown RBP5.45□□□□□ -1.54
RSM28YDR494W PTC5Q12511 572 aa5.45□□□□□ -1.54
RSM28YDR494W DED1P06634 604 aaKnown RBP5.44□□□□□ -1.54
RSM28YDR494W TAF13P11747 167 aa5.44□□□□□ -1.54
RSM28YDR494W FLR1P38124 548 aa5.44□□□□□ -1.54
RSM28YDR494W YGR122WP53272 402 aa5.44□□□□□ -1.54
RSM28YDR494W YPL277CQ08989 487 aa5.44□□□□□ -1.54
RSM28YDR494W MCD1Q12158 566 aa5.44□□□□□ -1.54
RSM28YDR494W COQ4O13525 335 aa5.43□□□□□ -1.54
RSM28YDR494W SOD2P00447 233 aa5.43□□□□□ -1.54
RSM28YDR494W SPS1P08458 490 aa5.43□□□□□ -1.54
RSM28YDR494W PRE9P23638 258 aaKnown RBP5.43□□□□□ -1.54
RSM28YDR494W BAP2P38084 609 aa5.43□□□□□ -1.54
RSM28YDR494W ALG3P38179 458 aa5.43□□□□□ -1.54
RSM28YDR494W GPB2P39717 880 aa5.43□□□□□ -1.54
RSM28YDR494W HDA2Q06629 674 aa5.43□□□□□ -1.54
RSM28YDR494W RPS13P05756 151 aaKnown RBP5.42□□□□□ -1.54
RSM28YDR494W MRPS18P42847 217 aa5.42□□□□□ -1.54
RSM28YDR494W ENV11P53246 860 aa5.42□□□□□ -1.54
RSM28YDR494W TNA1P53322 534 aa5.42□□□□□ -1.54
RSM28YDR494W HOS3Q02959 697 aaKnown RBP5.42□□□□□ -1.54
RSM28YDR494W TOD6P34219 525 aa5.41□□□□□ -1.54
RSM28YDR494W CCZ1P38273 704 aa5.41□□□□□ -1.54
RSM28YDR494W RAD2P07276 1031 aa5.4□□□□□ -1.54
RSM28YDR494W SNF5P18480 905 aa5.4□□□□□ -1.54
RSM28YDR494W SLD2P34252 453 aa5.4□□□□□ -1.54
RSM28YDR494W PIK1P39104 1066 aa5.4□□□□□ -1.54
RSM28YDR494W ROD1Q02805 837 aa5.4□□□□□ -1.54
RSM28YDR494W YML020WQ03722 664 aa5.4□□□□□ -1.54
RSM28YDR494W YPL260WQ08977 551 aa5.4□□□□□ -1.54
RSM28YDR494W CYC8P14922 966 aa5.39□□□□□ -1.55
RSM28YDR494W RPS26AP39938 119 aaKnown RBP5.39□□□□□ -1.55
RSM28YDR494W RPS26BP39939 119 aaKnown RBP5.39□□□□□ -1.55
RSM28YDR494W RPN3P40016 523 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms