RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W YJL045WP47052 634 aa4.55□□□□□ -1.68
SDC1YDR469W YPT53P36019 220 aa4.54□□□□□ -1.68
SDC1YDR469W MTR4P47047 1073 aaKnown RBP4.54□□□□□ -1.68
SDC1YDR469W ATG1P53104 897 aa4.54□□□□□ -1.68
SDC1YDR469W HRK1Q08732 759 aaKnown RBP4.54□□□□□ -1.68
SDC1YDR469W YOR352WQ08816 343 aa4.54□□□□□ -1.68
SDC1YDR469W SPS1P08458 490 aa4.53□□□□□ -1.68
SDC1YDR469W SRO9P25567 434 aaKnown RBP4.53□□□□□ -1.68
SDC1YDR469W HSE1P38753 452 aa4.53□□□□□ -1.68
SDC1YDR469W LAM1P38851 1228 aa4.53□□□□□ -1.68
SDC1YDR469W SHU2P38957 223 aa4.53□□□□□ -1.68
SDC1YDR469W YNR063WP53749 607 aa4.53□□□□□ -1.68
SDC1YDR469W UTP5Q04177 643 aaKnown RBP4.53□□□□□ -1.68
SDC1YDR469W SGD1Q06132 899 aa4.53□□□□□ -1.68
SDC1YDR469W MEF2P39677 819 aa4.52□□□□□ -1.69
SDC1YDR469W XKS1P42826 600 aa4.52□□□□□ -1.69
SDC1YDR469W ACF4P47129 309 aa4.52□□□□□ -1.69
SDC1YDR469W GCN5Q03330 439 aa4.52□□□□□ -1.69
SDC1YDR469W RSC58Q07979 502 aa4.52□□□□□ -1.69
SDC1YDR469W PUS9Q12069 462 aa4.52□□□□□ -1.69
SDC1YDR469W LAP2Q10740 671 aa4.51□□□□□ -1.69
SDC1YDR469W TRM2P33753 639 aa4.5□□□□□ -1.69
SDC1YDR469W SLI1P53304 468 aa4.5□□□□□ -1.69
SDC1YDR469W SUB2Q07478 446 aaKnown RBP4.5□□□□□ -1.69
SDC1YDR469W MSH3P25336 1018 aa4.49□□□□□ -1.69
SDC1YDR469W ATG14P38270 344 aa4.49□□□□□ -1.69
SDC1YDR469W QNS1P38795 714 aaKnown RBP4.49□□□□□ -1.69
SDC1YDR469W PEX13P80667 386 aa4.49□□□□□ -1.69
SDC1YDR469W NOG1Q02892 647 aaKnown RBP4.49□□□□□ -1.69
SDC1YDR469W ROT1Q03691 256 aa4.49□□□□□ -1.69
SDC1YDR469W RCL1Q08096 367 aaPredicted RBP4.49□□□□□ -1.69
SDC1YDR469W CYC1P00044 109 aaPredicted RBP4.48□□□□□ -1.69
SDC1YDR469W YSC84P32793 468 aa4.48□□□□□ -1.69
SDC1YDR469W MSE1P48525 536 aa4.48□□□□□ -1.69
SDC1YDR469W NOC3Q07896 663 aaPredicted RBP4.48□□□□□ -1.69
SDC1YDR469W NBA1Q08229 501 aaKnown RBP4.48□□□□□ -1.69
SDC1YDR469W GPI13Q07830 1017 aa4.47□□□□□ -1.69
SDC1YDR469W ENV11P53246 860 aa4.46□□□□□ -1.7
SDC1YDR469W SUN4P53616 420 aa4.46□□□□□ -1.7
SDC1YDR469W PLB2Q03674 706 aa4.46□□□□□ -1.7
SDC1YDR469W TAF7Q05021 590 aa4.46□□□□□ -1.7
SDC1YDR469W YCS4Q06156 1176 aa4.46□□□□□ -1.7
SDC1YDR469W PUF4P25339 888 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SDC1YDR469W SPO21Q12411 609 aa4.45□□□□□ -1.7
SDC1YDR469W TRL1P09880 827 aaKnown RBP4.44□□□□□ -1.7
SDC1YDR469W GRS1P38088 690 aaKnown RBP4.44□□□□□ -1.7
SDC1YDR469W RPL34AP87262 121 aaPredicted RBP4.44□□□□□ -1.7
SDC1YDR469W YML122CQ03207 126 aa4.44□□□□□ -1.7
SDC1YDR469W DUS4Q06063 367 aa4.44□□□□□ -1.7
SDC1YDR469W COQ4O13525 335 aa4.43□□□□□ -1.7
SDC1YDR469W HCM1P25364 564 aa4.43□□□□□ -1.7
SDC1YDR469W UGA4P32837 571 aa4.43□□□□□ -1.7
SDC1YDR469W GPB2P39717 880 aa4.43□□□□□ -1.7
SDC1YDR469W RSM26P47141 266 aa4.43□□□□□ -1.7
SDC1YDR469W TMA10Q06177 86 aa4.43□□□□□ -1.7
SDC1YDR469W FRT1Q99332 602 aa4.43□□□□□ -1.7
SDC1YDR469W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SDC1YDR469W VMA4P22203 233 aaKnown RBP4.42□□□□□ -1.7
SDC1YDR469W SEC26P41810 973 aaKnown RBP4.42□□□□□ -1.7
SDC1YDR469W HNT2P49775 206 aa4.42□□□□□ -1.7
SDC1YDR469W KIP1P28742 1111 aa4.41□□□□□ -1.7
SDC1YDR469W LST4P34239 828 aa4.41□□□□□ -1.7
SDC1YDR469W VPS53P47061 822 aa4.41□□□□□ -1.7
SDC1YDR469W SAM37P50110 327 aa4.41□□□□□ -1.7
SDC1YDR469W MCM6P53091 1017 aaKnown RBP4.41□□□□□ -1.7
SDC1YDR469W RSB1Q08417 382 aa4.41□□□□□ -1.7
SDC1YDR469W GAL10P04397 699 aa4.4□□□□□ -1.71
SDC1YDR469W CDC20P26309 610 aa4.4□□□□□ -1.71
SDC1YDR469W DOM34P33309 386 aa4.4□□□□□ -1.71
SDC1YDR469W CCZ1P38273 704 aa4.4□□□□□ -1.71
SDC1YDR469W NTO1Q12311 748 aa4.4□□□□□ -1.71
SDC1YDR469W CMP2P14747 604 aa4.39□□□□□ -1.71
SDC1YDR469W ADD66P36040 267 aa4.39□□□□□ -1.71
SDC1YDR469W CIC1P38779 376 aaKnown RBP4.39□□□□□ -1.71
SDC1YDR469W PEX28P38848 579 aa4.39□□□□□ -1.71
SDC1YDR469W AIM21P40563 679 aa4.39□□□□□ -1.71
SDC1YDR469W MDJ2P42834 146 aa4.39□□□□□ -1.71
SDC1YDR469W MNN10P50108 393 aaKnown RBP4.39□□□□□ -1.71
SDC1YDR469W PHO23P50947 330 aa4.39□□□□□ -1.71
SDC1YDR469W NUT2Q06213 157 aa4.39□□□□□ -1.71
SDC1YDR469W SRM1P21827 482 aa4.38□□□□□ -1.71
SDC1YDR469W PRP40P33203 583 aaKnown RBP4.38□□□□□ -1.71
SDC1YDR469W SQT1P35184 431 aa4.38□□□□□ -1.71
SDC1YDR469W BAP2P38084 609 aa4.38□□□□□ -1.71
SDC1YDR469W TNA1P53322 534 aa4.38□□□□□ -1.71
SDC1YDR469W CTF4Q01454 927 aa4.38□□□□□ -1.71
SDC1YDR469W HOS3Q02959 697 aaKnown RBP4.38□□□□□ -1.71
SDC1YDR469W RKM2Q03942 479 aa4.38□□□□□ -1.71
SDC1YDR469W RXT3Q07458 294 aa4.38□□□□□ -1.71
SDC1YDR469W ACK1Q07622 623 aaPredicted RBP4.38□□□□□ -1.71
SDC1YDR469W HEM13P11353 328 aaKnown RBP4.37□□□□□ -1.71
SDC1YDR469W AFG2P32794 780 aa4.37□□□□□ -1.71
SDC1YDR469W RDH54P38086 958 aa4.37□□□□□ -1.71
SDC1YDR469W ERP5P38819 212 aa4.37□□□□□ -1.71
SDC1YDR469W ULP1Q02724 621 aa4.37□□□□□ -1.71
SDC1YDR469W GPB1Q08886 897 aa4.37□□□□□ -1.71
SDC1YDR469W RAD53P22216 821 aa4.36□□□□□ -1.71
SDC1YDR469W STE11P23561 717 aa4.36□□□□□ -1.71
SDC1YDR469W PMI40P29952 429 aaKnown RBP4.36□□□□□ -1.71
SDC1YDR469W PIK1P39104 1066 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms