RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	EMG1	Q06287	252 aa	Known RBP	4.78	□□□□□ -1.64
SIP1	YDR422C	SSP2	Q08646	371 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	YDR056C	Q12025	205 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	SEC23	P15303	768 aa	Known RBP	4.78	□□□□□ -1.64
SIP1	YDR422C	YEF3	P16521	1044 aa	Known RBP	4.78	□□□□□ -1.64
SIP1	YDR422C	NMD3	P38861	518 aa	Known RBP	4.78	□□□□□ -1.64
SIP1	YDR422C	YGL140C	P53120	1219 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	RPC31	P17890	251 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	OPI1	P21957	404 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	SMC1	P32908	1225 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	AFR1	P33304	620 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	HLJ1	P48353	224 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	MET13	P53128	600 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	IRC3	Q06683	689 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	SDH5	Q08230	162 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	HOM3	P10869	527 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	MCM1	P11746	286 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	IRS4	P36115	615 aa	Known RBP	4.77	□□□□□ -1.65
SIP1	YDR422C	TYS1	P36421	394 aa	Known RBP	4.77	□□□□□ -1.65
SIP1	YDR422C	BAP2	P38084	609 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	MBP1	P39678	833 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	NIT2	P47016	307 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	ERP6	P53198	216 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	MRL1	Q06815	381 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	NYV1	Q12255	253 aa		4.77	□□□□□ -1.65
SIP1	YDR422C	CMR1	Q12510	522 aa	Known RBP	4.77	□□□□□ -1.65
SIP1	YDR422C	SBA1	P28707	216 aa	Known RBP	4.76	□□□□□ -1.65
SIP1	YDR422C	MCM10	P32354	571 aa		4.76	□□□□□ -1.65
SIP1	YDR422C	MEH1	Q02205	184 aa		4.76	□□□□□ -1.65
SIP1	YDR422C	REH1	Q06709	432 aa		4.76	□□□□□ -1.65
SIP1	YDR422C	SPO75	Q07798	868 aa		4.76	□□□□□ -1.65
SIP1	YDR422C	RTP1	Q12751	981 aa		4.76	□□□□□ -1.65
SIP1	YDR422C	ARE1	P25628	610 aa		4.76	□□□□□ -1.65
SIP1	YDR422C	GCD11	P32481	527 aa	Known RBP	4.76	□□□□□ -1.65
SIP1	YDR422C	MOT2	P34909	587 aa	Known RBP	4.76	□□□□□ -1.65
SIP1	YDR422C	SHM1	P37292	490 aa	Predicted RBP	4.76	□□□□□ -1.65
SIP1	YDR422C	TIF4632	P39936	914 aa	Known RBP	4.76	□□□□□ -1.65
SIP1	YDR422C	SIP5	P40210	489 aa	Known RBP	4.76	□□□□□ -1.65
SIP1	YDR422C	RRN7	P40992	514 aa		4.76	□□□□□ -1.65
SIP1	YDR422C	FBP26	P32604	452 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	RIM11	P38615	370 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	HSE1	P38753	452 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	PAN5	P38787	379 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	OSH2	Q12451	1283 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	NUP145	P49687	1317 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	CDC9	P04819	755 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	STE6	P12866	1290 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	MIH1	P23748	554 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	VBA3	P25594	458 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	MLF3	P32047	452 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	ERT1	P38140	529 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	QDR2	P40474	542 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	ALR2	P43553	858 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	IES1	P43579	692 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	UPF3	P48412	387 aa	Known RBP	4.75	□□□□□ -1.65
SIP1	YDR422C	RSC1	P53236	928 aa		4.75	□□□□□ -1.65
SIP1	YDR422C	MOT3	P54785	490 aa	Known RBP	4.75	□□□□□ -1.65
SIP1	YDR422C	NOG1	Q02892	647 aa	Known RBP	4.75	□□□□□ -1.65
SIP1	YDR422C	RRP6	Q12149	733 aa	Known RBP	4.75	□□□□□ -1.65
SIP1	YDR422C	MRP8	P35719	219 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	TRZ1	P36159	838 aa	Predicted RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	MTR4	P47047	1073 aa	Known RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	UBA2	P52488	636 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	HOL1	P53389	586 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	TRS130	Q03660	1102 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	TIF35	Q04067	274 aa	Known RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	NBA1	Q08229	501 aa	Known RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	FAP7	Q12055	197 aa	Predicted RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	CDC31	P06704	161 aa	Known RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	UTR2	P32623	467 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	SCD5	P34758	872 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	PBY1	P38254	753 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	YJR096W	P47137	282 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	GIC2	Q06648	383 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	VIP1	Q06685	1146 aa	Known RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	IMH1	Q06704	911 aa	Known RBP	4.74	□□□□□ -1.65
SIP1	YDR422C	IOC2	Q12072	812 aa		4.74	□□□□□ -1.65
SIP1	YDR422C	SRD1	P09007	221 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	URA1	P28272	314 aa	Predicted RBP	4.73	□□□□□ -1.65
SIP1	YDR422C	PYC2	P32327	1180 aa	Known RBP	4.73	□□□□□ -1.65
SIP1	YDR422C	IMP2'	P32351	346 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	SFP1	P32432	683 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	LYP1	P32487	611 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	SER1	P33330	395 aa	Known RBP	4.73	□□□□□ -1.65
SIP1	YDR422C	YGR250C	P53316	781 aa	Known RBP	4.73	□□□□□ -1.65
SIP1	YDR422C	MEP3	P53390	489 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	SIW14	P53965	281 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	CEG1	Q01159	459 aa	Predicted RBP	4.73	□□□□□ -1.65
SIP1	YDR422C	ROD1	Q02805	837 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	HEH2	Q03281	663 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	WTM2	Q12206	467 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	Q0182	Q9ZZW1	134 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	PRP5	P21372	849 aa	Predicted RBP	4.73	□□□□□ -1.65
SIP1	YDR422C	MNT3	P40549	630 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	SDA1	P53313	767 aa	Known RBP	4.73	□□□□□ -1.65
SIP1	YDR422C	JIP4	Q03361	876 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	BRE4	Q07660	1125 aa		4.73	□□□□□ -1.65
SIP1	YDR422C	NAT1	P12945	854 aa	Known RBP	4.72	□□□□□ -1.65
SIP1	YDR422C	TPM1	P17536	199 aa	Known RBP	4.72	□□□□□ -1.65
SIP1	YDR422C	DPB3	P27344	201 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms