RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C YLR257WQ06146 321 aaKnown RBP5.5□□□□□ -1.53
FCF1YDR339C PRP6P19735 899 aaPredicted RBP5.49□□□□□ -1.53
FCF1YDR339C MSH3P25336 1018 aa5.49□□□□□ -1.53
FCF1YDR339C SAM37P50110 327 aa5.49□□□□□ -1.53
FCF1YDR339C UTP5Q04177 643 aaKnown RBP5.49□□□□□ -1.53
FCF1YDR339C FLR1P38124 548 aa5.48□□□□□ -1.53
FCF1YDR339C SHU2P38957 223 aa5.48□□□□□ -1.53
FCF1YDR339C NOG1Q02892 647 aaKnown RBP5.48□□□□□ -1.53
FCF1YDR339C SAM35P14693 329 aa5.47□□□□□ -1.53
FCF1YDR339C YHL012WP38709 493 aa5.47□□□□□ -1.53
FCF1YDR339C XKS1P42826 600 aa5.47□□□□□ -1.53
FCF1YDR339C MTR4P47047 1073 aaKnown RBP5.47□□□□□ -1.53
FCF1YDR339C STM1P39015 273 aaKnown RBP5.46□□□□□ -1.54
FCF1YDR339C RSA3Q05942 220 aaKnown RBP5.46□□□□□ -1.54
FCF1YDR339C SEC20P28791 383 aa5.45□□□□□ -1.54
FCF1YDR339C CIC1P38779 376 aaKnown RBP5.45□□□□□ -1.54
FCF1YDR339C PRP40P33203 583 aaKnown RBP5.44□□□□□ -1.54
FCF1YDR339C ORC1P54784 914 aaPredicted RBP5.44□□□□□ -1.54
FCF1YDR339C TOS4Q06266 489 aa5.44□□□□□ -1.54
FCF1YDR339C AIM26P32858 118 aa5.43□□□□□ -1.54
FCF1YDR339C TOD6P34219 525 aa5.43□□□□□ -1.54
FCF1YDR339C YHL050CP38721 697 aa5.43□□□□□ -1.54
FCF1YDR339C YHR219WP38900 624 aa5.43□□□□□ -1.54
FCF1YDR339C YJL045WP47052 634 aa5.43□□□□□ -1.54
FCF1YDR339C RSM26P47141 266 aa5.43□□□□□ -1.54
FCF1YDR339C ULP1Q02724 621 aa5.43□□□□□ -1.54
FCF1YDR339C SEN54Q02825 467 aaPredicted RBP5.43□□□□□ -1.54
FCF1YDR339C DAL4Q04895 635 aa5.43□□□□□ -1.54
FCF1YDR339C YPL277CQ08989 487 aa5.43□□□□□ -1.54
FCF1YDR339C MET10P39692 1035 aa5.42□□□□□ -1.54
FCF1YDR339C LAP2Q10740 671 aa5.42□□□□□ -1.54
FCF1YDR339C MDL2P33311 773 aa5.41□□□□□ -1.54
FCF1YDR339C PEX28P38848 579 aa5.41□□□□□ -1.54
FCF1YDR339C RIM8P53179 542 aa5.41□□□□□ -1.54
FCF1YDR339C PHO4P07270 312 aaKnown RBP5.4□□□□□ -1.54
FCF1YDR339C HEM13P11353 328 aaKnown RBP5.4□□□□□ -1.54
FCF1YDR339C ATG14P38270 344 aa5.4□□□□□ -1.54
FCF1YDR339C HSE1P38753 452 aa5.4□□□□□ -1.54
FCF1YDR339C QNS1P38795 714 aaKnown RBP5.4□□□□□ -1.54
FCF1YDR339C FOL2P51601 243 aaKnown RBP5.4□□□□□ -1.54
FCF1YDR339C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
FCF1YDR339C RPS13P05756 151 aaKnown RBP5.39□□□□□ -1.55
FCF1YDR339C VMA4P22203 233 aaKnown RBP5.39□□□□□ -1.55
FCF1YDR339C SQT1P35184 431 aa5.39□□□□□ -1.55
FCF1YDR339C RCL1Q08096 367 aaPredicted RBP5.39□□□□□ -1.55
FCF1YDR339C HRK1Q08732 759 aaKnown RBP5.39□□□□□ -1.55
FCF1YDR339C SOD2P00447 233 aa5.38□□□□□ -1.55
FCF1YDR339C NAP1P25293 417 aaKnown RBP5.38□□□□□ -1.55
FCF1YDR339C PAM1P37304 830 aaKnown RBP5.38□□□□□ -1.55
FCF1YDR339C DAK2P43550 591 aa5.38□□□□□ -1.55
FCF1YDR339C HDA2Q06629 674 aa5.38□□□□□ -1.55
FCF1YDR339C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
FCF1YDR339C MET4P32389 672 aa5.37□□□□□ -1.55
FCF1YDR339C VPS35P34110 944 aa5.37□□□□□ -1.55
FCF1YDR339C RDH54P38086 958 aa5.37□□□□□ -1.55
FCF1YDR339C SNO2P53823 222 aa5.37□□□□□ -1.55
FCF1YDR339C YSC84P32793 468 aa5.36□□□□□ -1.55
FCF1YDR339C ADD66P36040 267 aa5.36□□□□□ -1.55
FCF1YDR339C YGL140CP53120 1219 aa5.36□□□□□ -1.55
FCF1YDR339C SVF1Q05515 481 aa5.36□□□□□ -1.55
FCF1YDR339C RSC58Q07979 502 aa5.36□□□□□ -1.55
FCF1YDR339C KAR2P16474 682 aaKnown RBP5.35□□□□□ -1.55
FCF1YDR339C SRO9P25567 434 aaKnown RBP5.35□□□□□ -1.55
FCF1YDR339C GPB2P39717 880 aa5.35□□□□□ -1.55
FCF1YDR339C KIP1P28742 1111 aa5.34□□□□□ -1.55
FCF1YDR339C GCD6P32501 712 aaKnown RBP5.34□□□□□ -1.55
FCF1YDR339C MSC6Q08818 692 aaKnown RBP5.34□□□□□ -1.55
FCF1YDR339C DED1P06634 604 aaKnown RBP5.33□□□□□ -1.56
FCF1YDR339C SPS1P08458 490 aa5.33□□□□□ -1.56
FCF1YDR339C AFG2P32794 780 aa5.33□□□□□ -1.56
FCF1YDR339C FAA3P39002 694 aa5.33□□□□□ -1.56
FCF1YDR339C EST2Q06163 884 aa5.33□□□□□ -1.56
FCF1YDR339C SPO21Q12411 609 aa5.33□□□□□ -1.56
FCF1YDR339C PPX1P38698 397 aa5.32□□□□□ -1.56
FCF1YDR339C VPS53P47061 822 aa5.32□□□□□ -1.56
FCF1YDR339C YPL109CQ02981 657 aa5.32□□□□□ -1.56
FCF1YDR339C ADI1Q03677 179 aa5.32□□□□□ -1.56
FCF1YDR339C WHI5Q12416 295 aa5.32□□□□□ -1.56
FCF1YDR339C SHM2P37291 469 aaKnown RBP5.31□□□□□ -1.56
FCF1YDR339C IPL1P38991 367 aa5.31□□□□□ -1.56
FCF1YDR339C THI12P42883 340 aa5.31□□□□□ -1.56
FCF1YDR339C THI5P43534 340 aa5.31□□□□□ -1.56
FCF1YDR339C THI11P47183 340 aa5.31□□□□□ -1.56
FCF1YDR339C CLU1Q03690 1277 aaKnown RBP5.31□□□□□ -1.56
FCF1YDR339C RKM2Q03942 479 aa5.31□□□□□ -1.56
FCF1YDR339C THI13Q07748 340 aa5.31□□□□□ -1.56
FCF1YDR339C OXR1Q08952 273 aa5.31□□□□□ -1.56
FCF1YDR339C ABZ1P37254 787 aaPredicted RBP5.3□□□□□ -1.56
FCF1YDR339C PIC2P40035 300 aa5.3□□□□□ -1.56
FCF1YDR339C SPT20P50875 604 aa5.3□□□□□ -1.56
FCF1YDR339C NBA1Q08229 501 aaKnown RBP5.3□□□□□ -1.56
FCF1YDR339C PTC5Q12511 572 aa5.3□□□□□ -1.56
FCF1YDR339C YLR358CO13565 187 aa5.29□□□□□ -1.56
FCF1YDR339C PRE10P21242 288 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
FCF1YDR339C LAM1P38851 1228 aa5.29□□□□□ -1.56
FCF1YDR339C MEF2P39677 819 aa5.29□□□□□ -1.56
FCF1YDR339C ROT1Q03691 256 aa5.29□□□□□ -1.56
FCF1YDR339C YDR132CQ03900 495 aa5.29□□□□□ -1.56
FCF1YDR339C YTA7P40340 1379 aa5.29□□□□□ -1.56
FCF1YDR339C COQ4O13525 335 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms