RNA–Protein interactions for RNA: YDR220C

YDR220C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR220C, Length 294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR220CYDR220C MRPL22P53881 309 aa6.35□□□□□ -1.39
YDR220CYDR220C PRP40P33203 583 aaKnown RBP6.34□□□□□ -1.39
YDR220CYDR220C GIP4P39732 760 aa6.34□□□□□ -1.39
YDR220CYDR220C MTR4P47047 1073 aaKnown RBP6.34□□□□□ -1.39
YDR220CYDR220C YNR063WP53749 607 aa6.34□□□□□ -1.39
YDR220CYDR220C RSA3Q05942 220 aaKnown RBP6.34□□□□□ -1.39
YDR220CYDR220C FLR1P38124 548 aa6.33□□□□□ -1.4
YDR220CYDR220C YHL012WP38709 493 aa6.33□□□□□ -1.4
YDR220CYDR220C PHO4P07270 312 aaKnown RBP6.32□□□□□ -1.4
YDR220CYDR220C ULP1Q02724 621 aa6.32□□□□□ -1.4
YDR220CYDR220C DAL4Q04895 635 aa6.32□□□□□ -1.4
YDR220CYDR220C YJL045WP47052 634 aa6.31□□□□□ -1.4
YDR220CYDR220C RSM26P47141 266 aa6.31□□□□□ -1.4
YDR220CYDR220C HEM13P11353 328 aaKnown RBP6.3□□□□□ -1.4
YDR220CYDR220C MET4P32389 672 aa6.29□□□□□ -1.4
YDR220CYDR220C PEX28P38848 579 aa6.28□□□□□ -1.4
YDR220CYDR220C DAK2P43550 591 aa6.28□□□□□ -1.4
YDR220CYDR220C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
YDR220CYDR220C VMA4P22203 233 aaKnown RBP6.27□□□□□ -1.41
YDR220CYDR220C AIM26P32858 118 aa6.27□□□□□ -1.41
YDR220CYDR220C RDH54P38086 958 aa6.27□□□□□ -1.41
YDR220CYDR220C HSE1P38753 452 aa6.27□□□□□ -1.41
YDR220CYDR220C HRK1Q08732 759 aaKnown RBP6.27□□□□□ -1.41
YDR220CYDR220C LAP2Q10740 671 aa6.27□□□□□ -1.41
YDR220CYDR220C MDL2P33311 773 aa6.26□□□□□ -1.41
YDR220CYDR220C VPS35P34110 944 aa6.26□□□□□ -1.41
YDR220CYDR220C SQT1P35184 431 aa6.26□□□□□ -1.41
YDR220CYDR220C QNS1P38795 714 aaKnown RBP6.26□□□□□ -1.41
YDR220CYDR220C RIM8P53179 542 aa6.26□□□□□ -1.41
YDR220CYDR220C YPL277CQ08989 487 aa6.26□□□□□ -1.41
YDR220CYDR220C GCD6P32501 712 aaKnown RBP6.25□□□□□ -1.41
YDR220CYDR220C TOD6P34219 525 aa6.25□□□□□ -1.41
YDR220CYDR220C WHI5Q12416 295 aa6.25□□□□□ -1.41
YDR220CYDR220C ATG14P38270 344 aa6.24□□□□□ -1.41
YDR220CYDR220C SSF1P38789 453 aaPredicted RBP6.24□□□□□ -1.41
YDR220CYDR220C FAA3P39002 694 aa6.24□□□□□ -1.41
YDR220CYDR220C YGL140CP53120 1219 aa6.24□□□□□ -1.41
YDR220CYDR220C RCL1Q08096 367 aaPredicted RBP6.24□□□□□ -1.41
YDR220CYDR220C SOD2P00447 233 aa6.23□□□□□ -1.41
YDR220CYDR220C RPS13P05756 151 aaKnown RBP6.23□□□□□ -1.41
YDR220CYDR220C KAR2P16474 682 aaKnown RBP6.23□□□□□ -1.41
YDR220CYDR220C AFG2P32794 780 aa6.23□□□□□ -1.41
YDR220CYDR220C SRO9P25567 434 aaKnown RBP6.22□□□□□ -1.41
YDR220CYDR220C YSC84P32793 468 aa6.22□□□□□ -1.41
YDR220CYDR220C ADD66P36040 267 aa6.22□□□□□ -1.41
YDR220CYDR220C FOL2P51601 243 aaKnown RBP6.22□□□□□ -1.41
YDR220CYDR220C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
YDR220CYDR220C YPL109CQ02981 657 aa6.22□□□□□ -1.41
YDR220CYDR220C HDA2Q06629 674 aa6.22□□□□□ -1.41
YDR220CYDR220C GPB2P39717 880 aa6.21□□□□□ -1.42
YDR220CYDR220C SNO2P53823 222 aa6.21□□□□□ -1.42
YDR220CYDR220C ADI1Q03677 179 aa6.21□□□□□ -1.42
YDR220CYDR220C RSC58Q07979 502 aa6.21□□□□□ -1.42
YDR220CYDR220C PPX1P38698 397 aa6.2□□□□□ -1.42
YDR220CYDR220C RKM2Q03942 479 aa6.2□□□□□ -1.42
YDR220CYDR220C PIC2P40035 300 aa6.19□□□□□ -1.42
YDR220CYDR220C EST2Q06163 884 aa6.19□□□□□ -1.42
YDR220CYDR220C DED1P06634 604 aaKnown RBP6.18□□□□□ -1.42
YDR220CYDR220C SEC23P15303 768 aaKnown RBP6.18□□□□□ -1.42
YDR220CYDR220C KIP1P28742 1111 aa6.18□□□□□ -1.42
YDR220CYDR220C VPS53P47061 822 aa6.18□□□□□ -1.42
YDR220CYDR220C MSC6Q08818 692 aaKnown RBP6.18□□□□□ -1.42
YDR220CYDR220C OXR1Q08952 273 aa6.18□□□□□ -1.42
YDR220CYDR220C HXK1P04806 485 aaKnown RBP6.17□□□□□ -1.42
YDR220CYDR220C SPS1P08458 490 aa6.17□□□□□ -1.42
YDR220CYDR220C THI12P42883 340 aa6.17□□□□□ -1.42
YDR220CYDR220C THI5P43534 340 aa6.17□□□□□ -1.42
YDR220CYDR220C THI11P47183 340 aa6.17□□□□□ -1.42
YDR220CYDR220C THI13Q07748 340 aa6.17□□□□□ -1.42
YDR220CYDR220C RPT1P33299 467 aaKnown RBP6.16□□□□□ -1.42
YDR220CYDR220C SPO21Q12411 609 aa6.16□□□□□ -1.42
YDR220CYDR220C ABZ1P37254 787 aaPredicted RBP6.15□□□□□ -1.42
YDR220CYDR220C ALG3P38179 458 aa6.15□□□□□ -1.42
YDR220CYDR220C CLU1Q03690 1277 aaKnown RBP6.15□□□□□ -1.42
YDR220CYDR220C YDR132CQ03900 495 aa6.15□□□□□ -1.42
YDR220CYDR220C PTC5Q12511 572 aa6.15□□□□□ -1.42
YDR220CYDR220C STM1P39015 273 aaKnown RBP6.14□□□□□ -1.43
YDR220CYDR220C NBA1Q08229 501 aaKnown RBP6.14□□□□□ -1.43
YDR220CYDR220C COQ4O13525 335 aa6.13□□□□□ -1.43
YDR220CYDR220C PRE10P21242 288 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
YDR220CYDR220C BAP2P38084 609 aa6.13□□□□□ -1.43
YDR220CYDR220C YFL054CP43549 646 aa6.13□□□□□ -1.43
YDR220CYDR220C CYC1P00044 109 aaPredicted RBP6.12□□□□□ -1.43
YDR220CYDR220C SNF5P18480 905 aa6.12□□□□□ -1.43
YDR220CYDR220C CTS1P29029 562 aa6.12□□□□□ -1.43
YDR220CYDR220C RAT1Q02792 1006 aaKnown RBP6.12□□□□□ -1.43
YDR220CYDR220C HOS3Q02959 697 aaKnown RBP6.12□□□□□ -1.43
YDR220CYDR220C SHM2P37291 469 aaKnown RBP6.11□□□□□ -1.43
YDR220CYDR220C LAM1P38851 1228 aa6.11□□□□□ -1.43
YDR220CYDR220C IPL1P38991 367 aa6.11□□□□□ -1.43
YDR220CYDR220C TNA1P53322 534 aa6.11□□□□□ -1.43
YDR220CYDR220C SGD1Q06132 899 aa6.11□□□□□ -1.43
YDR220CYDR220C YLR358CO13565 187 aa6.1□□□□□ -1.43
YDR220CYDR220C CCZ1P38273 704 aa6.1□□□□□ -1.43
YDR220CYDR220C MEF2P39677 819 aa6.1□□□□□ -1.43
YDR220CYDR220C SPT20P50875 604 aa6.1□□□□□ -1.43
YDR220CYDR220C ROD1Q02805 837 aa6.1□□□□□ -1.43
YDR220CYDR220C ROT1Q03691 256 aa6.1□□□□□ -1.43
YDR220CYDR220C GCN5Q03330 439 aa6.09□□□□□ -1.43
YDR220CYDR220C PLB2Q03674 706 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms