RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C SHU2P38957 223 aa1.72□□□□□ -2.13
SEC1YDR164C HRK1Q08732 759 aaKnown RBP1.72□□□□□ -2.13
SEC1YDR164C SRO9P25567 434 aaKnown RBP1.71□□□□□ -2.14
SEC1YDR164C PMI40P29952 429 aaKnown RBP1.71□□□□□ -2.14
SEC1YDR164C MNN10P50108 393 aaKnown RBP1.71□□□□□ -2.14
SEC1YDR164C PHO23P50947 330 aa1.71□□□□□ -2.14
SEC1YDR164C YML083CQ04526 418 aa1.71□□□□□ -2.14
SEC1YDR164C RSC58Q07979 502 aa1.71□□□□□ -2.14
SEC1YDR164C NBA1Q08229 501 aaKnown RBP1.71□□□□□ -2.14
SEC1YDR164C MCM5P29496 775 aaKnown RBP1.71□□□□□ -2.14
SEC1YDR164C CHS7P38843 316 aa1.71□□□□□ -2.14
SEC1YDR164C YJL045WP47052 634 aa1.71□□□□□ -2.14
SEC1YDR164C YAF9P53930 226 aa1.71□□□□□ -2.14
SEC1YDR164C RSA3Q05942 220 aaKnown RBP1.71□□□□□ -2.14
SEC1YDR164C PMT7Q06644 662 aa1.71□□□□□ -2.14
SEC1YDR164C UFD2P54860 961 aa1.7□□□□□ -2.14
SEC1YDR164C PLB2Q03674 706 aa1.7□□□□□ -2.14
SEC1YDR164C LAP2Q10740 671 aa1.7□□□□□ -2.14
SEC1YDR164C SSA4P22202 642 aaKnown RBP1.69□□□□□ -2.14
SEC1YDR164C LST4P34239 828 aa1.69□□□□□ -2.14
SEC1YDR164C NEM1P38757 446 aa1.69□□□□□ -2.14
SEC1YDR164C HNT2P49775 206 aa1.69□□□□□ -2.14
SEC1YDR164C YNR063WP53749 607 aa1.69□□□□□ -2.14
SEC1YDR164C RSC4Q02206 625 aa1.69□□□□□ -2.14
SEC1YDR164C DUS4Q06063 367 aa1.69□□□□□ -2.14
SEC1YDR164C PPM2Q08282 695 aa1.69□□□□□ -2.14
SEC1YDR164C STE11P23561 717 aa1.69□□□□□ -2.14
SEC1YDR164C CDC20P26309 610 aa1.69□□□□□ -2.14
SEC1YDR164C DOM34P33309 386 aa1.69□□□□□ -2.14
SEC1YDR164C EXO5P38289 585 aa1.69□□□□□ -2.14
SEC1YDR164C BOL3P39724 118 aa1.69□□□□□ -2.14
SEC1YDR164C SAP155P43612 1002 aa1.69□□□□□ -2.14
SEC1YDR164C MTR4P47047 1073 aaKnown RBP1.69□□□□□ -2.14
SEC1YDR164C NUT1P53114 1132 aa1.69□□□□□ -2.14
SEC1YDR164C KIN4Q01919 800 aa1.69□□□□□ -2.14
SEC1YDR164C BDF2Q07442 638 aa1.69□□□□□ -2.14
SEC1YDR164C RXT3Q07458 294 aa1.69□□□□□ -2.14
SEC1YDR164C ACK1Q07622 623 aaPredicted RBP1.69□□□□□ -2.14
SEC1YDR164C MON1P53129 644 aa1.68□□□□□ -2.14
SEC1YDR164C LGE1Q02796 332 aaKnown RBP1.68□□□□□ -2.14
SEC1YDR164C FLP1P03870 423 aa1.68□□□□□ -2.14
SEC1YDR164C YSC84P32793 468 aa1.68□□□□□ -2.14
SEC1YDR164C UBA2P52488 636 aa1.68□□□□□ -2.14
SEC1YDR164C COQ4O13525 335 aa1.67□□□□□ -2.14
SEC1YDR164C GAL10P04397 699 aa1.67□□□□□ -2.14
SEC1YDR164C CMP2P14747 604 aa1.67□□□□□ -2.14
SEC1YDR164C MSS4P38994 779 aa1.67□□□□□ -2.14
SEC1YDR164C RVS167P39743 482 aaKnown RBP1.67□□□□□ -2.14
SEC1YDR164C ATF1P40353 525 aa1.67□□□□□ -2.14
SEC1YDR164C SEC26P41810 973 aaKnown RBP1.67□□□□□ -2.14
SEC1YDR164C XKS1P42826 600 aa1.67□□□□□ -2.14
SEC1YDR164C BSC2Q05611 235 aa1.67□□□□□ -2.14
SEC1YDR164C RCL1Q08096 367 aaPredicted RBP1.67□□□□□ -2.14
SEC1YDR164C RSB1Q08417 382 aa1.67□□□□□ -2.14
SEC1YDR164C GPB1Q08886 897 aa1.67□□□□□ -2.14
SEC1YDR164C CCZ1P38273 704 aa1.66□□□□□ -2.14
SEC1YDR164C SPO21Q12411 609 aa1.66□□□□□ -2.14
SEC1YDR164C PMA1P05030 918 aaKnown RBP1.66□□□□□ -2.14
SEC1YDR164C OAR1P35731 278 aa1.66□□□□□ -2.14
SEC1YDR164C GLO3P38682 493 aaKnown RBP1.66□□□□□ -2.14
SEC1YDR164C QNS1P38795 714 aaKnown RBP1.66□□□□□ -2.14
SEC1YDR164C UTP5Q04177 643 aaKnown RBP1.66□□□□□ -2.14
SEC1YDR164C DEF1P35732 738 aaKnown RBP1.65□□□□□ -2.14
SEC1YDR164C MOH1P38191 138 aa1.65□□□□□ -2.14
SEC1YDR164C PBP1P53297 722 aaKnown RBP1.65□□□□□ -2.14
SEC1YDR164C YNL011CP53980 444 aa1.65□□□□□ -2.14
SEC1YDR164C YAP6Q03935 383 aa1.65□□□□□ -2.14
SEC1YDR164C RSM24Q03976 319 aa1.65□□□□□ -2.14
SEC1YDR164C INP54Q08227 384 aaKnown RBP1.65□□□□□ -2.14
SEC1YDR164C NOB1Q08444 459 aaKnown RBP1.65□□□□□ -2.14
SEC1YDR164C GTF1P53260 183 aaPredicted RBP1.65□□□□□ -2.15
SEC1YDR164C YLR224WQ05947 369 aa1.65□□□□□ -2.15
SEC1YDR164C QDR1P40475 563 aa1.64□□□□□ -2.15
SEC1YDR164C VPS53P47061 822 aa1.64□□□□□ -2.15
SEC1YDR164C CDC6P09119 513 aa1.64□□□□□ -2.15
SEC1YDR164C SRM1P21827 482 aa1.64□□□□□ -2.15
SEC1YDR164C GPB2P39717 880 aa1.64□□□□□ -2.15
SEC1YDR164C PEX13P80667 386 aa1.64□□□□□ -2.15
SEC1YDR164C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
SEC1YDR164C DCG1P32460 244 aa1.63□□□□□ -2.15
SEC1YDR164C GCV2P49095 1034 aa1.63□□□□□ -2.15
SEC1YDR164C TNA1P53322 534 aa1.63□□□□□ -2.15
SEC1YDR164C CDC55Q00362 526 aa1.63□□□□□ -2.15
SEC1YDR164C MSH3P25336 1018 aa1.62□□□□□ -2.15
SEC1YDR164C EMC1P25574 760 aa1.62□□□□□ -2.15
SEC1YDR164C KIP1P28742 1111 aa1.62□□□□□ -2.15
SEC1YDR164C CUE2P36075 443 aaKnown RBP1.62□□□□□ -2.15
SEC1YDR164C RFC5P38251 354 aa1.62□□□□□ -2.15
SEC1YDR164C SAM37P50110 327 aa1.62□□□□□ -2.15
SEC1YDR164C VPS62P53285 467 aa1.62□□□□□ -2.15
SEC1YDR164C KAR5Q04746 504 aa1.62□□□□□ -2.15
SEC1YDR164C KIN2P13186 1147 aaKnown RBP1.62□□□□□ -2.15
SEC1YDR164C VMA4P22203 233 aaKnown RBP1.62□□□□□ -2.15
SEC1YDR164C ACF4P47129 309 aa1.62□□□□□ -2.15
SEC1YDR164C NOG1Q02892 647 aaKnown RBP1.62□□□□□ -2.15
SEC1YDR164C HOS3Q02959 697 aaKnown RBP1.62□□□□□ -2.15
SEC1YDR164C NOC3Q07896 663 aaPredicted RBP1.62□□□□□ -2.15
SEC1YDR164C AIM39Q08223 395 aa1.62□□□□□ -2.15
SEC1YDR164C SCP160P06105 1222 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SEC1YDR164C KAR2P16474 682 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms